RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 DNAJA4Q8WW22 397 aaPredicted RBP5.41□□□□□ -1.54
SMARCAD1-203ENST00000394961 LIPHQ8WWY8 451 aa5.41□□□□□ -1.54
SMARCAD1-203ENST00000394961 CNOT9Q92600 299 aaKnown RBP5.41□□□□□ -1.54
SMARCAD1-203ENST00000394961 TMEM54Q969K7 222 aa5.41□□□□□ -1.54
SMARCAD1-203ENST00000394961 RHOXF2Q9BQY4 288 aa5.41□□□□□ -1.54
SMARCAD1-203ENST00000394961 TMEM185BQ9H7F4 350 aa5.41□□□□□ -1.54
SMARCAD1-203ENST00000394961 TUBG2Q9NRH3 451 aa5.41□□□□□ -1.54
SMARCAD1-203ENST00000394961 MRPL39Q9NYK5 338 aaKnown RBP5.41□□□□□ -1.54
SMARCAD1-203ENST00000394961 B3GAT1Q9P2W7 334 aa5.41□□□□□ -1.54
SMARCAD1-203ENST00000394961 CORO2BQ9UQ03 480 aa5.41□□□□□ -1.54
SMARCAD1-203ENST00000394961 J3QLI3 93 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 AP3D1O14617 1153 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 CLOCKO15516 846 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 NUDT14O95848 222 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 MT-ATP6P00846 226 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 FSHBP01225 129 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 ALDOCP09972 364 aaKnown RBP5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 SERPINF1P36955 418 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 SLC1A6P48664 564 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 RAB35Q15286 201 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 KRTAP24-1Q3LI83 254 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 MRPL2Q5T653 305 aaKnown RBP5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 C1orf140Q5VVS0 124 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 AAED1Q7RTV5 226 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 TMCO5AQ8N6Q1 288 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 ZNF781Q8N8C0 355 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 ZNF563Q8TA94 476 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 TSPEARQ8WU66 669 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 REPIN1Q9BWE0 567 aaKnown RBP5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 SLC19A3Q9BZV2 496 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 SHARPINQ9H0F6 387 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 PCDHAC1Q9H158 963 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 SLC52A3Q9NQ40 469 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 UPB1Q9UBR1 384 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 ABCA2Q9BZC7 2435 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 FBN3Q75N90 2809 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 FLNAP21333 2647 aaKnown RBP5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 FREM1Q5H8C1 2179 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 IGHV3-15A0A0B4J1V0 119 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 TMEM89A2RUT3 159 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 ERCC1P07992 297 aaPredicted RBP5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 ZNF14P17017 642 aaPredicted RBP5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 RPS23P62266 143 aaKnown RBP5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 SPOCK1Q08629 439 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 ANKFN1Q8N957 763 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 JADE3Q92613 823 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 SORCS2Q96PQ0 1159 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 ZNF416Q9BWM5 594 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 RMND5AQ9H871 391 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 THAP1Q9NVV9 213 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 MKLN1Q9UL63 735 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 MPDZO75970 2070 aa5.4□□□□□ -1.54
SMARCAD1-203ENST00000394961 FN1P02751 2386 aaKnown RBP5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 DNHD1Q96M86 4753 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 HDAC3O15379 428 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 SLC43A1O75387 559 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 RAD51DO75771 328 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 MFN2O95140 757 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 SNAP29O95721 258 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 ARAFP10398 606 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 ZNF16P17020 682 aaPredicted RBP5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 IGFBP5P24593 272 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 IL12AP29459 219 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 FAPQ12884 760 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 LARS2Q15031 903 aaKnown RBP5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 HIST3H3Q16695 136 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 SPANXN4Q5MJ08 99 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 ARFGEF3Q5TH69 2177 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 CASP12Q6UXS9 341 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 LINGO2Q7L985 606 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 OR52E4Q8NGH9 312 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 ITCHQ96J02 903 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 OR2M2Q96R28 347 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 ZNF426Q9BUY5 554 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 C1orf50Q9BV19 199 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 SLCO1B3Q9NPD5 702 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 CA10Q9NS85 328 aa5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 CGGBP1Q9UFW8 167 aaPredicted RBP5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 ZNF346Q9UL40 294 aaKnown RBP5.4□□□□□ -1.55
SMARCAD1-203ENST00000394961 IGLV3-9A0A075B6K5 115 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 TRAV36DV7A0A075B6V5 113 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 CIB4A0PJX0 185 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 ZNF99A8MXY4 864 aaPredicted RBP5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 M0R1B8 84 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 TRAF3IP2O43734 574 aaPredicted RBP5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 ITM2AO43736 263 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 SSX4O60224 188 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 BGLAPP02818 100 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 GSNP06396 782 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 TCEA1P23193 301 aaKnown RBP5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 GATA3P23771 443 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 GLRXP35754 106 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 ZNF83P51522 516 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 HGFACQ04756 655 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 EGR4Q05215 589 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 FAM120AOSQ5T036 256 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 SLC22A25Q6T423 547 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 KLHL24Q6TFL4 600 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 FOXL2NBQ6ZUU3 175 aa5.39□□□□□ -1.55
SMARCAD1-203ENST00000394961 Q71RC1 249 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms