RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 MIXL1Q9H2W2 232 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 SIGLEC7Q9Y286 467 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 CACNG2Q9Y698 323 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 SPTY2D1-AS1A0A0U1RR47 76 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 HMX3A6NHT5 357 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 C4orf47A7E2U8 309 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 G3V3Y1 287 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 PDCD5O14737 125 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 TNFRSF10CO14798 259 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 ZNF264O43296 627 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 BRINP1O60477 761 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 TBX19O60806 448 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 RFPL3O75679 317 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 UTS2O95399 124 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 ACTA2P62736 377 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 ACTG2P63267 376 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 ZNF628Q5EBL2 1059 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 UBQLNLQ8IYU4 475 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 KIAA1958Q8N8K9 716 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 OR2T35Q8NGX2 323 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 MENTQ9BUN1 341 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 ATG5Q9H1Y0 275 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 FBXL3Q9UKT7 428 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 MGAT4AQ9UM21 535 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 IGHV5-51A0A0C4DH38 117 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 A0A1W2PPL8 197 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 TEX46H3BTG2 121 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 TPD52L2O43399 206 aaKnown RBP11.51□□□□□ -0.57
UBXN4-201ENST00000272638 CBX7O95931 251 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 DCNP07585 359 aaKnown RBP11.51□□□□□ -0.57
UBXN4-201ENST00000272638 MSL3P1P0C860 447 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 DOC2BQ14184 412 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 FZD2Q14332 565 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 ZNF79Q15937 498 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 CHRDL2Q6WN34 429 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 PM20D2Q8IYS1 436 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 RNF113BQ8IZP6 322 aaKnown RBP11.51□□□□□ -0.57
UBXN4-201ENST00000272638 RFLNBQ8N5W9 214 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 TOR1AIP2Q8NFQ8 470 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 OR52N1Q8NH53 320 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 SETD6Q8TBK2 473 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 SLC7A6Q92536 515 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 SNAPC3Q92966 411 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 PTP4A1Q93096 173 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 RSPO3Q9BXY4 272 aaPredicted RBP11.51□□□□□ -0.57
UBXN4-201ENST00000272638 LYRM4Q9HD34 91 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 MEPEQ9NQ76 525 aaPredicted RBP11.51□□□□□ -0.57
UBXN4-201ENST00000272638 AKR7A2O43488 359 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 DUX1O43812 170 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 ARSBP15848 533 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 TBXA2RP21731 343 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 HTR4Q13639 388 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 PRICKLE4Q2TBC4 344 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 SLC6A19Q695T7 634 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 HBMQ6B0K9 141 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 TSSK4Q6SA08 328 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 KLHL24Q6TFL4 600 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 LINC00346Q8IVM7 164 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 SIAH3Q8IW03 269 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 ZNF321PQ8N8H1 164 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 OR2T4Q8NH00 348 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 CTRCQ99895 268 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 FGF20Q9NP95 211 aaPredicted RBP11.51□□□□□ -0.57
UBXN4-201ENST00000272638 FLRT3Q9NZU0 649 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 ARPC1BO15143 372 aaKnown RBP11.51□□□□□ -0.57
UBXN4-201ENST00000272638 ERGP11308 486 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 DNASE1P24855 282 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 SLC6A9P48067 706 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 TSPAN5P62079 268 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 EIF2B5Q13144 721 aaKnown RBP11.51□□□□□ -0.57
UBXN4-201ENST00000272638 GALEQ14376 348 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 OR7A5Q15622 319 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 NDUFA5Q16718 116 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 OR5M1Q8NGP8 315 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 SYNPRQ8TBG9 265 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 GPR119Q8TDV5 335 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 FGF21Q9NSA1 209 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 NCDNQ9UBB6 729 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 KCNE5Q9UJ90 142 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 ZNF337Q9Y3M9 751 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 SPTA1P02549 2419 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 A0A0C4DFX4 3053 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 THBS1P07996 1170 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 GTF2F2P13984 249 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 EVX1P49640 407 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 GPR176Q14439 515 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 SF3A2Q15428 464 aaKnown RBP11.51□□□□□ -0.57
UBXN4-201ENST00000272638 SSX6Q7RTT6 188 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 LRRC28Q86X40 367 aaPredicted RBP11.51□□□□□ -0.57
UBXN4-201ENST00000272638 ZNF101Q8IZC7 436 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 TMEM106AQ96A25 262 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 ATF6BQ99941 703 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 SEMA4CQ9C0C4 833 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 DIABLOQ9NR28 239 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 MED17Q9NVC6 651 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 C2orf42Q9NWW7 574 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 ZNF224Q9NZL3 707 aa11.51□□□□□ -0.57
UBXN4-201ENST00000272638 SRPX2O60687 465 aaPredicted RBP11.5□□□□□ -0.57
UBXN4-201ENST00000272638 ZNF136P52737 540 aa11.5□□□□□ -0.57
UBXN4-201ENST00000272638 PSG6Q00889 435 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms