RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 H7C1C5 153 aa15.45■□□□□ 0.06
PHRF1-201ENST00000264555 NSA2O95478 260 aaKnown RBP15.45■□□□□ 0.06
PHRF1-201ENST00000264555 PAHP00439 452 aa15.45■□□□□ 0.06
PHRF1-201ENST00000264555 LCATP04180 440 aa15.45■□□□□ 0.06
PHRF1-201ENST00000264555 ETV5P41161 510 aa15.45■□□□□ 0.06
PHRF1-201ENST00000264555 FNTBP49356 437 aa15.45■□□□□ 0.06
PHRF1-201ENST00000264555 ETV1P50549 477 aa15.45■□□□□ 0.06
PHRF1-201ENST00000264555 LCN6P62502 163 aa15.45■□□□□ 0.06
PHRF1-201ENST00000264555 AIMP2Q13155 320 aaKnown RBP15.45■□□□□ 0.06
PHRF1-201ENST00000264555 ELAVL1Q15717 326 aaKnown RBP15.45■□□□□ 0.06
PHRF1-201ENST00000264555 COL28A1Q2UY09 1125 aa15.45■□□□□ 0.06
PHRF1-201ENST00000264555 LACC1Q8IV20 430 aa15.45■□□□□ 0.06
PHRF1-201ENST00000264555 CA13Q8N1Q1 262 aa15.45■□□□□ 0.06
PHRF1-201ENST00000264555 COL11A1P12107 1806 aaPredicted RBP15.44■□□□□ 0.06
PHRF1-201ENST00000264555 ACOD1A6NK06 481 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 TFP02787 698 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 ST6GAL1P15907 406 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 SRYQ05066 204 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 PHC2Q8IXK0 858 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 OR51T1Q8NGJ9 327 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 TEAD3Q99594 435 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 H7C417 338 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 KCNK2O95069 426 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 HTR2BP41595 481 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 Q499Y3 187 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 GSG1LQ6UXU4 331 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 PXKQ7Z7A4 578 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 ZNF454Q8N9F8 522 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 EDAQ92838 391 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 ZNF707Q96C28 371 aaPredicted RBP15.44■□□□□ 0.06
PHRF1-201ENST00000264555 CCNL2Q96S94 520 aaPredicted RBP15.44■□□□□ 0.06
PHRF1-201ENST00000264555 CRISPLD2Q9H0B8 497 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 WASF3Q9UPY6 502 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 CORINQ9Y5Q5 1042 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 TRIP11Q15643 1979 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 OPN1LWP04000 364 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 CLEC2LP0C7M8 214 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 SNRPBP14678 240 aaKnown RBP15.44■□□□□ 0.06
PHRF1-201ENST00000264555 THBS2P35442 1172 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 SQSTM1Q13501 440 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 LYSMD2Q8IV50 215 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 NT5CQ8TCD5 201 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 CHRDQ9H2X0 955 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 UGT2A1Q9Y4X1 527 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 MT-ND4P03905 459 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 PRSS36Q5K4E3 855 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 ATAD3CQ5T2N8 411 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 MTFR2Q6P444 385 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 ABHD12BQ7Z5M8 362 aaPredicted RBP15.44■□□□□ 0.06
PHRF1-201ENST00000264555 SNIP1Q8TAD8 396 aaKnown RBP15.44■□□□□ 0.06
PHRF1-201ENST00000264555 SLC25A19Q9HC21 320 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 RBFOX1Q9NWB1 397 aaKnown RBP15.44■□□□□ 0.06
PHRF1-201ENST00000264555 PLEK2Q9NYT0 353 aa15.44■□□□□ 0.06
PHRF1-201ENST00000264555 NXT1Q9UKK6 140 aaKnown RBP15.44■□□□□ 0.06
PHRF1-201ENST00000264555 GGT3PA6NGU5 568 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 GOSR2O14653 212 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 ZNF749O43361 778 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 TDHQ8IZJ6 230 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 KLF15Q9UIH9 416 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 SIPA1L1O43166 1804 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 EIF4E2O60573 245 aaKnown RBP15.43■□□□□ 0.06
PHRF1-201ENST00000264555 DPM1O60762 260 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 TBX19O60806 448 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 ADAM23O75077 832 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 LSSP48449 732 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 NKPD1Q17RQ9 610 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 FAM76BQ5HYJ3 339 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 PAPD4Q6PIY7 484 aaKnown RBP15.43■□□□□ 0.06
PHRF1-201ENST00000264555 NINJ1Q92982 152 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 DHRS1Q96LJ7 313 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 ATF4P18848 351 aaPredicted RBP15.43■□□□□ 0.06
PHRF1-201ENST00000264555 MAKP20794 623 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 DPY19L4Q7Z388 723 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 TP53I13Q8NBR0 393 aaPredicted RBP15.43■□□□□ 0.06
PHRF1-201ENST00000264555 SLC25A46Q96AG3 418 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 PHB2Q99623 299 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 NPAP1Q9NZP6 1156 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 TMEFF2Q9UIK5 374 aaPredicted RBP15.43■□□□□ 0.06
PHRF1-201ENST00000264555 A8MVM7 634 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 YKT6O15498 198 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 SLC22A5O76082 557 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 GLCEO94923 617 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 DIRAS3O95661 229 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 APEX1P27695 318 aaKnown RBP15.43■□□□□ 0.06
PHRF1-201ENST00000264555 EPHA2P29317 976 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 FAM198BQ6UWH4 519 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 UNQ6126/PRO20091Q6UXV3 157 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 NDUFAF7Q7L592 441 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 STX12Q86Y82 276 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 FAM160A2Q8N612 972 aaPredicted RBP15.43■□□□□ 0.06
PHRF1-201ENST00000264555 NDUFB11Q9NX14 153 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 NTNG1Q9Y2I2 539 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 HIF3AQ9Y2N7 669 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 PLXNB2O15031 1838 aa15.43■□□□□ 0.06
PHRF1-201ENST00000264555 A0A1W2PPC4 97 aa15.42■□□□□ 0.06
PHRF1-201ENST00000264555 EEF1E1-BLOC1S5C9J1V9 151 aa15.42■□□□□ 0.06
PHRF1-201ENST00000264555 RUNX2Q13950 521 aa15.42■□□□□ 0.06
PHRF1-201ENST00000264555 YIF1BQ5BJH7 314 aa15.42■□□□□ 0.06
PHRF1-201ENST00000264555 SSX6Q7RTT6 188 aa15.42■□□□□ 0.06
PHRF1-201ENST00000264555 CSNK2A3Q8NEV1 391 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms