RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 CBFBQ13951 182 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 NKAIN1Q4KMZ8 207 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 LEG1Q6P5S2 330 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 SSX6Q7RTT6 188 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 NANOGNBQ7Z5D8 188 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 GHDCQ8N2G8 530 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 OR6K6Q8NGW6 343 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 PIGKQ92643 395 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 KTI12Q96EK9 354 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 ATF6BQ99941 703 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 SYNDIG1Q9H7V2 258 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 FKRPQ9H9S5 495 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 U3KQA8 63 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 IGHV5-10-1A0A0J9YXX1 117 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 A0A1W2PQM1 296 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 C3orf80F5H4A9 247 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 YKT6O15498 198 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 SCRG1O75711 98 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 GLCEO94923 617 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 MYL9P24844 172 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 SDHAP31040 664 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 EVI2BP34910 448 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 HCCSP53701 268 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 RNF4P78317 190 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 LTBQ06643 244 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 TP53I3Q53FA7 332 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 DMKNQ6E0U4 476 aaPredicted RBP11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 GDPD3Q7L5L3 318 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 MS4A15Q8N5U1 240 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 GDPD1Q8N9F7 314 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 LRRC75AQ8NAA5 344 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 OR5J2Q8NH18 312 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 ABHD4Q8TB40 342 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 SNX33Q8WV41 574 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 ACOT12Q8WYK0 555 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 NAT6Q93015 286 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 TP53INP1Q96A56 240 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 ZNF524Q96C55 264 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 Q96M85 177 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 LPAR4Q99677 370 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 RNF32Q9H0A6 362 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 TIGARQ9NQ88 270 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 FSCN3Q9NQT6 498 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 ADAM30Q9UKF2 790 aa11.77□□□□□ -0.53
SPTLC1-201ENST00000262554 OR6C70A6NIJ9 312 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 IDSB3KWA1 339 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 KHNYNO15037 678 aaKnown RBP11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 SCO2O43819 266 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 FADS1O60427 444 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 SLC25A12O75746 678 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 SERPINA3P01011 423 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 IL7P13232 177 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 SPNP16150 400 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 ACVR1BP36896 505 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 CDKN2AP42771 156 aaKnown RBP11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 RPS5P46782 204 aaKnown RBP11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 P2RX1P51575 399 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 SLC25A1P53007 311 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 DCDP81605 110 aaKnown RBP11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 HSF2Q03933 536 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 RPL18Q07020 188 aaKnown RBP11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 SCN1BQ07699 218 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 BAK1Q16611 211 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 CDONQ4KMG0 1287 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 PYDC2Q56P42 97 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 EMC4Q5J8M3 183 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 CCBE1Q6UXH8 406 aaPredicted RBP11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 RPTNQ6XPR3 784 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 FAM122BQ7Z309 247 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 CEACAM19Q7Z692 300 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 ANKRD37Q7Z713 158 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 TPRA1Q86W33 373 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 RFLNBQ8N5W9 214 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 SLC38A9Q8NBW4 561 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 LSM14AQ8ND56 463 aaKnown RBP11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 ZPLD1Q8TCW7 415 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 METTL21AQ8WXB1 218 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 EDAQ92838 391 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 TAAR8Q969N4 342 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 CCDC74BQ96LY2 380 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 KLHDC3Q9BQ90 382 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 TTTY10Q9BZA0 68 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 MARCH7Q9H992 704 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 GRHPRQ9UBQ7 328 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 TBC1D24Q9ULP9 559 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 TRAV36DV7A0A075B6V5 113 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 IGHV3-20A0A0C4DH32 117 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 AGRPO00253 132 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 DVL2O14641 736 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 OGG1O15527 345 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 SELENOFO60613 162 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 HPGDSO60760 199 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 SLC19A2O60779 497 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 ALOX12BO75342 701 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 TIAF1O95411 115 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 TXNDC12O95881 172 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 CFIP05156 583 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 F13BP05160 661 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 EFR3AQ14156 821 aa11.76□□□□□ -0.53
SPTLC1-201ENST00000262554 TOMM34Q15785 309 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms