RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 OR2T1O43869 369 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 ZIC3O60481 467 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 ENTPD6O75354 484 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 TFAP2AP05549 437 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 NUDT6P53370 316 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 MLLT10P55197 1068 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 GPR85P60893 370 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 TMEM44Q2T9K0 475 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 SYT14P1Q58G82 188 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 C3orf33Q6P1S2 294 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 MAMDC2Q7Z304 686 aaPredicted RBP18.77■□□□□ 0.6
PNKP-203ENST00000593946 ARL5BQ96KC2 179 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 LRR1Q96L50 414 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 SERINC1Q9NRX5 453 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 DNAJC27Q9NZQ0 273 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 PSORS1C1Q9UIG5 152 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 GPR52Q9Y2T5 361 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 MSRB2Q9Y3D2 182 aa18.77■□□□□ 0.6
PNKP-203ENST00000593946 OR5H15A6NDH6 313 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 FTCDNL1E5RQL4 147 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 KLK10O43240 276 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 PPP1R3DO95685 299 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 HK1P19367 917 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 TCEA1P23193 301 aaKnown RBP18.77■□□□□ 0.59
PNKP-203ENST00000593946 FOXK2Q01167 660 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 FOXO1Q12778 655 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 MEDAGQ5VYS4 303 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 DPY19L2P2Q6ZN68 376 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 NANOGNBQ7Z5D8 188 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 ZNF540Q8NDQ6 660 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 MDS2Q8NDY4 140 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 MOSPD2Q8NHP6 518 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 DNAJA3Q96EY1 480 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 PLEKHA8Q96JA3 519 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 FAM173AQ9BQD7 235 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 POTEKPQ9BYX7 375 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 AMBNQ9NP70 447 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 CMC2Q9NRP2 79 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 FKBP14Q9NWM8 211 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 DKKL1Q9UK85 242 aa18.77■□□□□ 0.59
PNKP-203ENST00000593946 ACACAQ13085 2346 aa18.76■□□□□ 0.59
PNKP-203ENST00000593946 PINLYPA6NC86 204 aa18.76■□□□□ 0.59
PNKP-203ENST00000593946 CLCA1A8K7I4 914 aa18.76■□□□□ 0.59
PNKP-203ENST00000593946 BLOC1S5-TXNDC5H3BN57 136 aa18.76■□□□□ 0.59
PNKP-203ENST00000593946 SLC2A10O95528 541 aa18.76■□□□□ 0.59
PNKP-203ENST00000593946 PEPDP12955 493 aa18.76■□□□□ 0.59
PNKP-203ENST00000593946 SRD5A2P31213 254 aa18.76■□□□□ 0.59
PNKP-203ENST00000593946 AQP2P41181 271 aa18.76■□□□□ 0.59
PNKP-203ENST00000593946 SELENBP1Q13228 472 aa18.76■□□□□ 0.59
PNKP-203ENST00000593946 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.76■□□□□ 0.59
PNKP-203ENST00000593946 BCDIN3DQ7Z5W3 292 aaKnown RBP18.76■□□□□ 0.59
PNKP-203ENST00000593946 LRRC75AQ8NAA5 344 aa18.76■□□□□ 0.59
PNKP-203ENST00000593946 OR5M1Q8NGP8 315 aa18.76■□□□□ 0.59
PNKP-203ENST00000593946 SNIP1Q8TAD8 396 aaKnown RBP18.76■□□□□ 0.59
PNKP-203ENST00000593946 IPCEF1Q8WWN9 437 aaPredicted RBP18.76■□□□□ 0.59
PNKP-203ENST00000593946 ZFP64Q9NPA5 681 aa18.76■□□□□ 0.59
PNKP-203ENST00000593946 CCNB1IP1Q9NPC3 277 aa18.76■□□□□ 0.59
PNKP-203ENST00000593946 NRIP3Q9NQ35 241 aa18.76■□□□□ 0.59
PNKP-203ENST00000593946 SPIN1Q9Y657 262 aaPredicted RBP18.76■□□□□ 0.59
PNKP-203ENST00000593946 FRYQ5TBA9 3013 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 H3BML4 177 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 FZD7O75084 574 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 HIST1H2ABP04908 130 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 ZNF17P17021 662 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 RPL4P36578 427 aaKnown RBP18.75■□□□□ 0.59
PNKP-203ENST00000593946 RPL18Q07020 188 aaKnown RBP18.75■□□□□ 0.59
PNKP-203ENST00000593946 SGCBQ16585 318 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 SLC35F1Q5T1Q4 408 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 SLC6A19Q695T7 634 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 ARHGAP11AQ6P4F7 1023 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 HIST3H2AQ7L7L0 130 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 IGFN1Q86VF2 1251 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 OR2M7Q8NG81 312 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 MFSD8Q8NHS3 518 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 SLC25A43Q8WUT9 341 aaPredicted RBP18.75■□□□□ 0.59
PNKP-203ENST00000593946 HAS2Q92819 552 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 HIST1H2ACQ93077 130 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 SLC25A36Q96CQ1 311 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 ZNF582Q96NG8 517 aaPredicted RBP18.75■□□□□ 0.59
PNKP-203ENST00000593946 SIGLEC11Q96RL6 698 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 UBL7Q96S82 380 aaPredicted RBP18.75■□□□□ 0.59
PNKP-203ENST00000593946 HES7Q9BYE0 225 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 BOKQ9UMX3 212 aaPredicted RBP18.75■□□□□ 0.59
PNKP-203ENST00000593946 KIAA1549Q9HCM3 1950 aa18.75■□□□□ 0.59
PNKP-203ENST00000593946 KDM4EB2RXH2 506 aaPredicted RBP18.74■□□□□ 0.59
PNKP-203ENST00000593946 ARPC3O15145 178 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 FKBP2P26885 142 aaKnown RBP18.74■□□□□ 0.59
PNKP-203ENST00000593946 GRPRP30550 384 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 SLC15A1P46059 708 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 CCL11P51671 97 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 NR1H2P55055 460 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 PIGFQ07326 219 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 MFSD13AQ14CX5 517 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 DEFB109BQ30KR1 87 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 GLYR1Q49A26 553 aaPredicted RBP18.74■□□□□ 0.59
PNKP-203ENST00000593946 ALG10Q5BKT4 473 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 ZNF362Q5T0B9 420 aaPredicted RBP18.74■□□□□ 0.59
PNKP-203ENST00000593946 AHSA2Q719I0 299 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 ATP6V1C2Q8NEY4 427 aa18.74■□□□□ 0.59
PNKP-203ENST00000593946 FDCSPQ8NFU4 85 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms