RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 FTCDNL1E5RQL4 147 aa16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 MRPL33O75394 65 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 KRT34O76011 436 aa16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 LGI1O95970 557 aa16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 RABL3Q5HYI8 236 aa16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 REP15Q6BDI9 236 aa16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 CALHM3Q86XJ0 350 aa16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 ZNF433Q8N7K0 673 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 MFSD8Q8NHS3 518 aa16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 KTI12Q96EK9 354 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 PLPPR2Q96GM1 343 aa16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 ALPK1Q96QP1 1244 aa16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 USB1Q9BQ65 265 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 SF3B5Q9BWJ5 86 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 TRIM2Q9C040 744 aa16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 PIF1Q9H611 641 aa16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 ADPRHL2Q9NX46 363 aa16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 RPS6KB2Q9UBS0 482 aa16.32■□□□□ 0.2
SHKBP1-202ENST00000593764 IGKV1D-42A0A075B6H8 117 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 ELOA3DA6NLF2 546 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 BBIP1A8MTZ0 92 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 MRASO14807 208 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 FZD7O75084 574 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 PLAUP00749 431 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 NPPAP01160 153 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 OPN1SWP03999 348 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 PCGF2P35227 344 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 CRYBA2P53672 197 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 FOXG1P55316 489 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 RGS8P57771 180 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 OR1Q1Q15612 314 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 DEFB113Q30KQ7 82 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 ELOA3BQ3SY89 546 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 ALG10BQ5I7T1 473 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 SNX32Q86XE0 403 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 SLC30A8Q8IWU4 369 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 UBE2J2Q8N2K1 259 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 ELOA3Q8NG57 546 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 OR9K2Q8NGE7 335 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 DNAJA4Q8WW22 397 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 SLC38A4Q969I6 547 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 ZNF385AQ96PM9 386 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 TMEM204Q9BSN7 226 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 TAPBPLQ9BX59 468 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 ARMCX1Q9P291 453 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 MALT1Q9UDY8 824 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 TESQ9UGI8 421 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 SLC9A8Q9Y2E8 581 aa16.31■□□□□ 0.2
SHKBP1-202ENST00000593764 RAI1Q7Z5J4 1906 aaPredicted RBP16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 PDLIM1O00151 329 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 AHSA1O95433 338 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 C8BP07358 591 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 RPS5P46782 204 aaKnown RBP16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 NR1H2P55055 460 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 MAPRE2Q15555 327 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 ACKR1Q16570 336 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 NRF1Q16656 503 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 VMACQ2NL98 169 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 MMEL1Q495T6 779 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 FAM91A1Q658Y4 838 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 TMEM225Q6GV28 225 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 ALKBH2Q6NS38 261 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 ULK3Q6PHR2 472 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 CASP12Q6UXS9 341 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 CCDC80Q76M96 950 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 OR8J3Q8NGG0 315 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 TAAR8Q969N4 342 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 TMEM45BQ96B21 275 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 TAMM41Q96BW9 452 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 ARHGDIGQ99819 225 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 EVA1AQ9H8M9 152 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 PARPBPQ9NWS1 579 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 ASB6Q9NWX5 421 aa16.3■□□□□ 0.2
SHKBP1-202ENST00000593764 ARID1AO14497 2285 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 A0A087WUJ7 227 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 A0A0B4J2E0 115 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 A0A1B0GX12 115 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 M0R3H8 397 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 SLC22A2O15244 555 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 ITGA5P08648 1049 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 PNMTP11086 282 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 GGT1P19440 569 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 CD247P20963 164 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 FAPQ12884 760 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 NPTX1Q15818 432 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 TSPO2Q5TGU0 170 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 ZNF704Q6ZNC4 412 aaPredicted RBP16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 PATL1Q86TB9 770 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 GPAT4Q86UL3 456 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 P3H2Q8IVL5 708 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 OR4D11Q8NGI4 311 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 OR6T1Q8NGN1 323 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 SLC25A36Q96CQ1 311 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 SLC47A1Q96FL8 570 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 ZNF583Q96ND8 569 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 SH3GL1Q99961 368 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 ECSITQ9BQ95 431 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 UBTD1Q9HAC8 227 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 TMEM27Q9HBJ8 222 aa16.29■□□□□ 0.2
SHKBP1-202ENST00000593764 SLC7A10Q9NS82 523 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms