RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 ANGPT2O15123 496 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 AHSA1O95433 338 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 ARAFP10398 606 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 ETS2P15036 469 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 GTF2E2P29084 291 aaKnown RBP11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 AQP1P29972 269 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 ZNF83P51522 516 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 ATP5J2P56134 94 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 RPS4XP62701 263 aaKnown RBP11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 NFYCQ13952 458 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 SCARB2Q14108 478 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 SELPLGQ14242 412 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 ELOA3BQ3SY89 546 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 ZNF672Q499Z4 452 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 RUNDC3AQ59EK9 446 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 C1orf140Q5VVS0 124 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 METTL21CQ5VZV1 264 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 REEP3Q6NUK4 255 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 SEZ6L2Q6UXD5 910 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 AAED1Q7RTV5 226 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 BIVMQ86UB2 503 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 P2RY8Q86VZ1 359 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 PIAS4Q8N2W9 510 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 ELOA3Q8NG57 546 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 OR9K2Q8NGE7 335 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 RNF217Q8TC41 542 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 GTPBP3Q969Y2 492 aaKnown RBP11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 SLC25A36Q96CQ1 311 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 CGREF1Q99674 301 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 SPATA5L1Q9BVQ7 753 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 RSPO3Q9BXY4 272 aaPredicted RBP11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 SLC7A10Q9NS82 523 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 NPAP1Q9NZP6 1156 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 MALT1Q9UDY8 824 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 PRDM4Q9UKN5 801 aa11.19□□□□□ -0.62
NPLOC4-213ENST00000573519 RAI1Q7Z5J4 1906 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 TRIM64A6NGJ6 449 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 TRIM64BA6NI03 449 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 AQP7P3A6NL99 342 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 M0R1B8 84 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 FBP2O00757 339 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 KRT33AO76009 404 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 ITGA5P08648 1049 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 GPX2P18283 190 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 CDH2P19022 906 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 SLC6A2P23975 617 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 PRKAR1BP31321 381 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 MDH1P40925 334 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 RPS5P46782 204 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 FOXG1P55316 489 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 MTPNP58546 118 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 NCALDP61601 193 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 ADRM1Q16186 407 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 TSPO2Q5TGU0 170 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 OR7E24Q6IFN5 339 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 KLHL17Q6TDP4 642 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 PRSS57Q6UWY2 283 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 CLEC9AQ6UXN8 241 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 SSX8Q7RTT4 187 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 CIARTQ8N365 385 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 DPP10Q8N608 796 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 SMAP2Q8WU79 429 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 ZNF385AQ96PM9 386 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 BDH2Q9BUT1 245 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 SF3B5Q9BWJ5 86 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 C1QTNF6Q9BXI9 259 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 CCDC134Q9H6E4 229 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 SAR1AQ9NR31 198 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 CISD1Q9NZ45 108 aaKnown RBP11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 SLC13A4Q9UKG4 626 aa11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 MAP1AP78559 2803 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-213ENST00000573519 PRORSD1PA6NEY8 169 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 TMEM229AB2RXF0 380 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 ATP8B1O43520 1251 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 SOD3P08294 240 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 CDKN1AP38936 164 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 CDH11P55287 796 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 IL1RL1Q01638 556 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 TGFBR3Q03167 851 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 KLF10Q13118 480 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 GABRA6Q16445 453 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 CYP51A1Q16850 503 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 GLIPR1L2Q4G1C9 344 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 SLC22A25Q6T423 547 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 TMEM108Q6UXF1 575 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 COMTD1Q86VU5 262 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 PTOV1Q86YD1 416 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 STK35Q8TDR2 534 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 IGFBPL1Q8WX77 278 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 SLC35B4Q969S0 331 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 TMEM45BQ96B21 275 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 KTI12Q96EK9 354 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 TRMT61AQ96FX7 289 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 ANKRD27Q96NW4 1050 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 ZNF317Q96PQ6 595 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 ZNF607Q96SK3 696 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 PRR14Q9BWN1 585 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 TRIM2Q9C040 744 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 SLCO5A1Q9H2Y9 848 aa11.17□□□□□ -0.62
NPLOC4-213ENST00000573519 ALG2Q9H553 416 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms