RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 ANGPTL6Q8NI99 470 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 OR7D2Q96RA2 312 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 TMEM269A0A1B0GVZ9 245 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 TCRBV3S1A0A5B6 114 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 C17orf112F2Z3M2 114 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 GM2AP17900 193 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 CBLL1Q75N03 491 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 OR1M1Q8NGA1 313 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 OR56B4Q8NH76 319 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 LRRC15Q8TF66 581 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 GGHQ92820 318 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 UHRF2Q96PU4 802 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 ADAM19Q9H013 955 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 ZDHHC11Q9H8X9 412 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 RCE1Q9Y256 329 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 MED16Q9Y2X0 877 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 ZNF281Q9Y2X9 895 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 PIAS3Q9Y6X2 628 aa9.29□□□□□ -0.92
COL4A6-208ENST00000538570 BLACEA4D250 179 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 CACNG3O60359 315 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 LDB3O75112 727 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 TK1P04183 234 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 CLEC3BP05452 202 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 CHRM4P08173 479 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 IQCF3P0C7M6 154 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 DDOSTP39656 456 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 PLA2G7Q13093 441 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 OR1Q1Q15612 314 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 C18orf63Q68DL7 685 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 CHTF18Q8WVB6 975 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 CPEB1Q9BZB8 566 aaKnown RBP9.28□□□□□ -0.92
COL4A6-208ENST00000538570 PGAP2Q9UHJ9 254 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 AKAP12Q02952 1782 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 A0A0A6YYC8 382 aaPredicted RBP9.28□□□□□ -0.92
COL4A6-208ENST00000538570 PRAMEF27A3QJZ7 478 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 METTL15A6NJ78 407 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 CLDN24A6NM45 220 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 I3L1I5 382 aaPredicted RBP9.28□□□□□ -0.92
COL4A6-208ENST00000538570 FOXE1O00358 373 aaPredicted RBP9.28□□□□□ -0.92
COL4A6-208ENST00000538570 GLSO94925 669 aaPredicted RBP9.28□□□□□ -0.92
COL4A6-208ENST00000538570 CBX7O95931 251 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 IGHG1P01857 330 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 GLAP06280 429 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 JAG1P78504 1218 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 GAB1Q13480 694 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 GPR176Q14439 515 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 SLC9A3R2Q15599 337 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 C1orf220Q5T0J3 134 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 PRAMEF9Q5VWM5 478 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 PSMF1Q92530 271 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 PIGCQ92535 297 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 GMLQ99445 158 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 CMSS1Q9BQ75 279 aaKnown RBP9.28□□□□□ -0.92
COL4A6-208ENST00000538570 OR11A1Q9GZK7 315 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 METTL9Q9H1A3 318 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 ELOVL3Q9HB03 270 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 SLC6A20Q9NP91 592 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 CXXC1Q9P0U4 656 aaPredicted RBP9.28□□□□□ -0.92
COL4A6-208ENST00000538570 MFGE8Q08431 387 aaPredicted RBP9.28□□□□□ -0.92
COL4A6-208ENST00000538570 ZNF252P-AS1Q0IIN9 211 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 HEPHL1Q6MZM0 1159 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 NECTIN4Q96NY8 510 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 TSSK2Q96PF2 358 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 TPSD1Q9BZJ3 242 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 ATP13A2Q9NQ11 1180 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 MRPL22Q9NWU5 206 aaKnown RBP9.28□□□□□ -0.92
COL4A6-208ENST00000538570 CBLCQ9ULV8 474 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 GABRQQ9UN88 632 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 GPR45Q9Y5Y3 372 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 PHLPP1O60346 1717 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 FZD7O75084 574 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 FBXO24O75426 580 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 SIX6O95475 246 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 IL2RGP31785 369 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 P2RY2P41231 377 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 MEOX2P50222 304 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 TGFBR3Q03167 851 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 RBMS2Q15434 407 aaKnown RBP9.28□□□□□ -0.92
COL4A6-208ENST00000538570 BAK1Q16611 211 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 CCNJQ5T5M9 372 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 VASNQ6EMK4 673 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 RPL22L1Q6P5R6 122 aaKnown RBP9.28□□□□□ -0.92
COL4A6-208ENST00000538570 NDUFAF7Q7L592 441 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 CLMPQ9H6B4 373 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 IL23AQ9NPF7 189 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 STARD5Q9NSY2 213 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 SIDT1Q9NXL6 827 aaKnown RBP9.28□□□□□ -0.92
COL4A6-208ENST00000538570 FBXL2Q9UKC9 423 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 NENFQ9UMX5 172 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 PCDHB10Q9UN67 800 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 NCR1O76036 304 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 ARG2P78540 354 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 LYPD4Q6UWN0 246 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 DPPA4Q7L190 304 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 VRK2Q86Y07 508 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 KDM8Q8N371 416 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 FKRPQ9H9S5 495 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 OLAHQ9NV23 265 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 IL17CQ9P0M4 197 aa9.28□□□□□ -0.92
COL4A6-208ENST00000538570 FAM96BQ9Y3D0 163 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms