RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 RPS6KA6Q9UK32 745 aa11.42□□□□□ -0.58
VEGFA-224ENST00000523873 PRDM4Q9UKN5 801 aa11.42□□□□□ -0.58
VEGFA-224ENST00000523873 A4GNTQ9UNA3 340 aa11.42□□□□□ -0.58
VEGFA-224ENST00000523873 PROCRQ9UNN8 238 aa11.42□□□□□ -0.58
VEGFA-224ENST00000523873 TRAPPC4Q9Y296 219 aa11.42□□□□□ -0.58
VEGFA-224ENST00000523873 EMC9Q9Y3B6 208 aa11.42□□□□□ -0.58
VEGFA-224ENST00000523873 KLF2Q9Y5W3 355 aaPredicted RBP11.42□□□□□ -0.58
VEGFA-224ENST00000523873 PKDREJQ9NTG1 2253 aa11.42□□□□□ -0.58
VEGFA-224ENST00000523873 SPTAN1Q13813 2472 aaKnown RBP11.42□□□□□ -0.58
VEGFA-224ENST00000523873 ZNF716A6NP11 495 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 FTCDNL1E5RQL4 147 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 hCG_2039718K7EN88 272 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 FFAR1O14842 300 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 GYG2O15488 501 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 PIP5K1CO60331 668 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 DIRAS1O95057 198 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 CGAP01215 116 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 BGLAPP02818 100 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 IFNW1P05000 195 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 CRHP06850 196 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 EDNRAP25101 427 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 GRPRP30550 384 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 UQCRC1P31930 480 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 UGT2B15P54855 530 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 RNPS1Q15287 305 aaKnown RBP11.41□□□□□ -0.58
VEGFA-224ENST00000523873 TMEM201Q5SNT2 666 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 GTF2IRD2BQ6EKJ0 949 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 ZNF474Q6S9Z5 364 aaPredicted RBP11.41□□□□□ -0.58
VEGFA-224ENST00000523873 GTF2IRD2Q86UP8 949 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 SLC43A2Q8N370 569 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 KDM8Q8N371 416 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 PFN4Q8NHR9 129 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 TMEM255BQ8WV15 326 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 CCDC124Q96CT7 223 aaKnown RBP11.41□□□□□ -0.58
VEGFA-224ENST00000523873 MOGAT1Q96PD6 335 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 NAA11Q9BSU3 229 aaPredicted RBP11.41□□□□□ -0.58
VEGFA-224ENST00000523873 PIGMQ9H3S5 423 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 KLHL9Q9P2J3 617 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 PRPF19Q9UMS4 504 aaKnown RBP11.41□□□□□ -0.58
VEGFA-224ENST00000523873 SAMD4AQ9UPU9 718 aaKnown RBP11.41□□□□□ -0.58
VEGFA-224ENST00000523873 CACNA1DQ01668 2161 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 PRR14LQ5THK1 2151 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 PTPN13Q12923 2485 aa11.41□□□□□ -0.58
VEGFA-224ENST00000523873 LRRK2Q5S007 2527 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 TRAV36DV7A0A075B6V5 113 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 AQP7P3A6NL99 342 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 DNPH1O43598 174 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 OR5F1O95221 314 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 P2RY4P51582 365 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 LSM11P83369 360 aaKnown RBP eCLIP11.4□□□□□ -0.582e-28■■□□□ 11.6
VEGFA-224ENST00000523873 H3F3AP84243 136 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 EXOC3L2Q2M3D2 409 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 SPATS1Q496A3 300 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 SWT1Q5T5J6 900 aaKnown RBP11.4□□□□□ -0.58
VEGFA-224ENST00000523873 ZNF787Q6DD87 383 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 TTC33Q6PID6 262 aaPredicted RBP11.4□□□□□ -0.58
VEGFA-224ENST00000523873 PAQR6Q6TCH4 344 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 C10orf53Q8N6V4 93 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 OR6K3Q8NGY3 331 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 MFSD8Q8NHS3 518 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 PIGXQ8TBF5 258 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 PYURFQ96I23 114 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 BTBD10Q9BSF8 475 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 TMEM43Q9BTV4 400 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 RBM24Q9BX46 236 aaKnown RBP11.4□□□□□ -0.58
VEGFA-224ENST00000523873 BCO1Q9HAY6 547 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 GLRX2Q9NS18 164 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 GALNT8Q9NY28 637 aa11.4□□□□□ -0.58
VEGFA-224ENST00000523873 ALPK2Q86TB3 2170 aa11.4□□□□□ -0.59
VEGFA-224ENST00000523873 TCRBV5S2A0A599 114 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 A8MXE2 369 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 M0R082 166 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 EIF1BO60739 113 aaKnown RBP11.39□□□□□ -0.59
VEGFA-224ENST00000523873 CH25HO95992 272 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 SEMG1P04279 462 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 YES1P07947 543 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 GTF2E2P29084 291 aaKnown RBP11.39□□□□□ -0.59
VEGFA-224ENST00000523873 NTF4P34130 210 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 VLDLRP98155 873 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 TRIM25Q14258 630 aaKnown RBP11.39□□□□□ -0.59
VEGFA-224ENST00000523873 DNAL1Q4LDG9 190 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 FAM69AQ5T7M9 428 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 MEX3BQ6ZN04 569 aaKnown RBP11.39□□□□□ -0.59
VEGFA-224ENST00000523873 GPAT4Q86UL3 456 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 MEX3DQ86XN8 651 aaKnown RBP11.39□□□□□ -0.59
VEGFA-224ENST00000523873 ARHGAP24Q8N264 748 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 ZNF417Q8TAU3 575 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 RNASE6Q93091 150 aaKnown RBP11.39□□□□□ -0.59
VEGFA-224ENST00000523873 ZNF587Q96SQ5 575 aaPredicted RBP11.39□□□□□ -0.59
VEGFA-224ENST00000523873 EPYCQ99645 322 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 ZNF426Q9BUY5 554 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 MEPEQ9NQ76 525 aaPredicted RBP11.39□□□□□ -0.59
VEGFA-224ENST00000523873 PLSCR4Q9NRQ2 329 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 MAN2C1Q9NTJ4 1040 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 C20orf141Q9NUB4 165 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 C6orf203Q9P0P8 240 aaPredicted RBP11.39□□□□□ -0.59
VEGFA-224ENST00000523873 ACTR3BQ9P1U1 418 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 PRSS50Q9UI38 385 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 ENPP4Q9Y6X5 453 aa11.39□□□□□ -0.59
VEGFA-224ENST00000523873 IGKV3D-15A0A087WSY6 115 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms