RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 ETV2O00321 342 aaPredicted RBP13.59□□□□□ -0.23
SREK1-209ENST00000520953 WBP4O75554 376 aaKnown RBP13.59□□□□□ -0.23
SREK1-209ENST00000520953 CHMP24386 653 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 RBM34P42696 430 aaKnown RBP13.59□□□□□ -0.23
SREK1-209ENST00000520953 RPS5P46782 204 aaKnown RBP13.59□□□□□ -0.23
SREK1-209ENST00000520953 MEOX1P50221 254 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 FHL1Q13642 323 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 RNFT1Q5M7Z0 435 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 SLC46A3Q7Z3Q1 461 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 ENTHD1Q8IYW4 607 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 GNPDA2Q8TDQ7 276 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 ARL5BQ96KC2 179 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 SMAD5Q99717 465 aaKnown RBP13.59□□□□□ -0.23
SREK1-209ENST00000520953 FAM173AQ9BQD7 235 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 CCDC90BQ9GZT6 254 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 PTGES2Q9H7Z7 377 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 ZNF556Q9HAH1 456 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 ZFP64Q9NPA5 681 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 DKKL1Q9UK85 242 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 POFUT2Q9Y2G5 429 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 INMTO95050 263 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 TMBIM6P55061 237 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 CTBP2P56545 445 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 NUP107P57740 925 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 EMX1Q04741 257 aaPredicted RBP13.59□□□□□ -0.23
SREK1-209ENST00000520953 TSPAN31Q12999 210 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 TBR1Q16650 682 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 RNF113BQ8IZP6 322 aaKnown RBP13.59□□□□□ -0.23
SREK1-209ENST00000520953 OR51A7Q8NH64 312 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 TMEM234Q8WY98 164 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 SCMH1Q96GD3 660 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 HS6ST2Q96MM7 605 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 PTDSS2Q9BVG9 487 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 TTTY12Q9BZ98 90 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 TPRKBQ9Y3C4 175 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 PCDHGB1Q9Y5G3 927 aa13.59□□□□□ -0.23
SREK1-209ENST00000520953 CBR3O75828 277 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 TRAPPC6AO75865 159 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 WISP2O76076 250 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 SAGP10523 405 aaPredicted RBP13.58□□□□□ -0.24
SREK1-209ENST00000520953 CD46P15529 392 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 FPR3P25089 353 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 GP2P55259 537 aaKnown RBP13.58□□□□□ -0.24
SREK1-209ENST00000520953 DLX5P56178 289 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 DSCR4P56555 118 aaPredicted RBP13.58□□□□□ -0.24
SREK1-209ENST00000520953 B3GALT5-AS1P59052 145 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 CXADRP78310 365 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 SLC25A53Q5H9E4 307 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 WIPI1Q5MNZ9 446 aaPredicted RBP13.58□□□□□ -0.24
SREK1-209ENST00000520953 CLEC12AQ5QGZ9 265 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 RAET1LQ5VY80 246 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 FAR1Q8WVX9 515 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 C5orf34Q96MH7 638 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 CHRNA9Q9UGM1 479 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 RNF6Q9Y252 685 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 ZNF407Q9C0G0 2248 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 TPRP12270 2363 aaKnown RBP13.58□□□□□ -0.24
SREK1-209ENST00000520953 OR2M5A3KFT3 312 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 EFCAB9A8MZ26 197 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 H0YC42 278 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 H3BN98 237 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 NPIPB7O75200 414 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 OSMP13725 252 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 GDF1P27539 372 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 GGT2P36268 569 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 MAGEA5P43359 124 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 DBPQ10586 325 aaPredicted RBP13.58□□□□□ -0.24
SREK1-209ENST00000520953 THSD4Q6ZMP0 1018 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 LRRC69Q6ZNQ3 347 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 TMPRSS11FQ6ZWK6 438 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 PARP8Q8N3A8 854 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 C10orf53Q8N6V4 93 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 FAM83FQ8NEG4 500 aaPredicted RBP13.58□□□□□ -0.24
SREK1-209ENST00000520953 ZCCHC14Q8WYQ9 949 aaKnown RBP13.58□□□□□ -0.24
SREK1-209ENST00000520953 SGTBQ96EQ0 304 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 MRGPRX4Q96LA9 322 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 TNFRSF13CQ96RJ3 184 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 TMEM43Q9BTV4 400 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 MFRPQ9BY79 579 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 ZNF703Q9H7S9 590 aaPredicted RBP13.58□□□□□ -0.24
SREK1-209ENST00000520953 C12orf10Q9HB07 376 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 SCN3BQ9NY72 215 aa13.58□□□□□ -0.24
SREK1-209ENST00000520953 MAP1BP46821 2468 aaKnown RBP13.57□□□□□ -0.24
SREK1-209ENST00000520953 UNC119BA6NIH7 251 aa13.57□□□□□ -0.24
SREK1-209ENST00000520953 FAM20BO75063 409 aa13.57□□□□□ -0.24
SREK1-209ENST00000520953 SFTPDP35247 375 aa13.57□□□□□ -0.24
SREK1-209ENST00000520953 IFNGR2P38484 337 aa13.57□□□□□ -0.24
SREK1-209ENST00000520953 PTGES3Q15185 160 aaKnown RBP13.57□□□□□ -0.24
SREK1-209ENST00000520953 ZNF74Q16587 644 aa13.57□□□□□ -0.24
SREK1-209ENST00000520953 TMEM44Q2T9K0 475 aa13.57□□□□□ -0.24
SREK1-209ENST00000520953 CD300LDQ6UXZ3 194 aa13.57□□□□□ -0.24
SREK1-209ENST00000520953 LINC00471Q8N535 108 aa13.57□□□□□ -0.24
SREK1-209ENST00000520953 TMEM251Q8N6I4 163 aa13.57□□□□□ -0.24
SREK1-209ENST00000520953 ZNF540Q8NDQ6 660 aa13.57□□□□□ -0.24
SREK1-209ENST00000520953 ACACBO00763 2458 aa13.57□□□□□ -0.24
SREK1-209ENST00000520953 TLN1Q9Y490 2541 aaKnown RBP13.57□□□□□ -0.24
SREK1-209ENST00000520953 A0A1W2PNR3 127 aa13.56□□□□□ -0.24
SREK1-209ENST00000520953 NOL3O60936 208 aaKnown RBP13.56□□□□□ -0.24
SREK1-209ENST00000520953 KLK2P20151 261 aa13.56□□□□□ -0.24
SREK1-209ENST00000520953 APOBEC1P41238 236 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms