RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 TMPRSS2O15393 492 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 EIF1BO60739 113 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 LGI1O95970 557 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 AK1P00568 194 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 IGKV3-15P01624 115 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 ERCC1P07992 297 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 MSMBP08118 114 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 ABHD2P08910 425 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 LINC00032P0C843 101 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 LYNX1P0DP58 116 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 IMPDH2P12268 514 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 DDX5P17844 614 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 NPR2P20594 1047 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 EPHA1P21709 976 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 FKBP2P26885 142 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 RYKP34925 604 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 THBS4P35443 961 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 DNAJB13P59910 316 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 HBA1P69905 142 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 DEFA6Q01524 100 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 IL1RL1Q01638 556 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 HGFACQ04756 655 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 FUT5Q11128 374 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 PTGR1Q14914 329 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 ADRM1Q16186 407 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 ARHGAP11BQ3KRB8 267 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 GALNTL6Q49A17 601 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 ATP6AP1LQ52LC2 224 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 CFAP157Q5JU67 520 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 AP1ARQ63HQ0 302 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 ANKRD16Q6P6B7 361 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 LINGO2Q7L985 606 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 CDK20Q8IZL9 346 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 Q8N3U1 123 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 FAM169BQ8N8A8 192 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 POMGNT2Q8NAT1 580 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 OR9K2Q8NGE7 335 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 OR1K1Q8NGR3 316 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF563Q8TA94 476 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 MAGEE2Q8TD90 523 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 UBASH3BQ8TF42 649 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 MZB1Q8WU39 189 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 WDR60Q8WVS4 1066 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 OIT3Q8WWZ8 545 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 BCL2L2Q92843 193 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 TMEM186Q96B77 213 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 MOAP1Q96BY2 351 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF385AQ96PM9 386 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF317Q96PQ6 595 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 ALKBH3Q96Q83 286 aaPredicted RBP4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 JMJD8Q96S16 334 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 RBM4Q9BWF3 364 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 RACGAP1Q9H0H5 632 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 TSPYL1Q9H0U9 437 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 NELFAQ9H3P2 528 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 LPAR2Q9HBW0 351 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 EXOSC3Q9NQT5 275 aaKnown RBP4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 PYCARDQ9ULZ3 195 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 PCDHB10Q9UN67 800 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 PCDHGB4Q9UN71 923 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 USP22Q9UPT9 525 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 SLC35A3Q9Y2D2 325 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 FIS1Q9Y3D6 152 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 DNAJC15Q9Y5T4 150 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 WNK2Q9Y3S1 2297 aa4.43□□□□□ -1.7
SNRNP40-204ENST00000474025 A0A096LPE4 126 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 TMED7-TICAM2A0A0A6YYA0 188 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 IGHV2OR16-5A0A0B4J2B6 119 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 RNF103-CHMP3A0A140T963 221 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 A0A1W2PPZ6 126 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 TMEM72A0PK05 275 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 SH3PXD2BA1X283 911 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 DUXAA6NLW8 204 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 CLDN24A6NM45 220 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 TMEM114B3SHH9 223 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 TMEM233B4DJY2 109 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF587BE7ETH6 402 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 TRIM77I1YAP6 450 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 M0R082 166 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 NR5A2O00482 541 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 AP3D1O14617 1153 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 WNT9BO14905 357 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 PIP5K1BO14986 540 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 ZNF208O43345 1280 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 PLIN3O60664 434 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 GLRA3O75311 464 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 TFP02787 698 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 GUSBP08236 651 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 CELA3BP08861 270 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 ADRA2AP08913 450 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 GAAP10253 952 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 SAGP10523 405 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 CCNA2P20248 432 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 MATN1P21941 496 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 PAX7P23759 505 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 SOAT1P35610 550 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 RPL3P39023 403 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 LIMS1P48059 325 aa4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 IDH2P48735 452 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-204ENST00000474025 SELENOPP49908 381 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms