RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 A0A1W2PNR3 127 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 LIPT2A6NK58 231 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 EFCAB9A8MZ26 197 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 ZNF814B7Z6K7 855 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 PLPP3O14495 311 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 EI24O14681 340 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 SLC16A6O15403 523 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 ZNHIT1O43257 154 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 OR2T1O43869 369 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 HCN1O60741 890 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 LILRA1O75019 489 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 OR7A10O76100 309 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 SNAP29O95721 258 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 ACTL6AO96019 429 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 SFTPCP11686 197 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 PEPDP12955 493 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 OSMP13725 252 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 ZNF708P17019 499 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 ZNF17P17021 662 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 KLK2P20151 261 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 PTNP21246 168 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 TCEA1P23193 301 aaKnown RBP5.34□□□□□ -1.55
USP39-213ENST00000467885 FPR3P25089 353 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 IFNGR2P38484 337 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 VHLP40337 213 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 RPS5P46782 204 aaKnown RBP5.34□□□□□ -1.55
USP39-213ENST00000467885 LHX2P50458 406 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 P2RY4P51582 365 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 ALDH3A2P51648 485 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 CRISP1P54107 249 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 CLDN18P56856 261 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 CARD18P57730 90 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 ADARB1P78563 741 aaKnown RBP5.34□□□□□ -1.55
USP39-213ENST00000467885 ALDH6A1Q02252 535 aaKnown RBP5.34□□□□□ -1.55
USP39-213ENST00000467885 CRYZQ08257 329 aaKnown RBP5.34□□□□□ -1.55
USP39-213ENST00000467885 ZP4Q12836 540 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 MYBPHQ13203 477 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 LY6DQ14210 128 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 PTGES3Q15185 160 aaKnown RBP5.34□□□□□ -1.55
USP39-213ENST00000467885 SNCBQ16143 134 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 ZNF239Q16600 458 aaKnown RBP5.34□□□□□ -1.55
USP39-213ENST00000467885 RFX4Q33E94 735 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 ZIK1Q3SY52 487 aaPredicted RBP5.34□□□□□ -1.55
USP39-213ENST00000467885 ZBED5Q49AG3 693 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 KRTCAP3Q53RY4 240 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 ACSM5Q6NUN0 579 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 C5orf46Q6UWT4 87 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 RASSF6Q6ZTQ3 369 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 FGD2Q7Z6J4 655 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 GGNQ86UU5 652 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 CDK20Q8IZL9 346 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 TEX19Q8NA77 164 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 OR51A7Q8NH64 312 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 PIGXQ8TBF5 258 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 FAR1Q8WVX9 515 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 TFAP2CQ92754 450 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 ABTB1Q969K4 478 aaPredicted RBP5.34□□□□□ -1.55
USP39-213ENST00000467885 GTPBP3Q969Y2 492 aaKnown RBP5.34□□□□□ -1.55
USP39-213ENST00000467885 MIB2Q96AX9 1013 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 SLC25A36Q96CQ1 311 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 SNRNP40Q96DI7 357 aaKnown RBP5.34□□□□□ -1.55
USP39-213ENST00000467885 ZNF837Q96EG3 531 aaPredicted RBP5.34□□□□□ -1.55
USP39-213ENST00000467885 SGTBQ96EQ0 304 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 FAM46AQ96IP4 442 aaKnown RBP5.34□□□□□ -1.55
USP39-213ENST00000467885 MBOAT4Q96T53 435 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 DDOQ99489 341 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 RBM4BQ9BQ04 359 aaKnown RBP5.34□□□□□ -1.55
USP39-213ENST00000467885 RBM4Q9BWF3 364 aaKnown RBP5.34□□□□□ -1.55
USP39-213ENST00000467885 GRIP2Q9C0E4 1043 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 SLC6A15Q9H2J7 730 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 MCCC2Q9HCC0 563 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 FANCFQ9NPI8 374 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 C8orf4Q9NR00 106 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 SELENONQ9NZV5 590 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 SPRR3Q9UBC9 169 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 SEC14L4Q9UDX3 406 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 SIGLEC7Q9Y286 467 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 HDGFL3Q9Y3E1 203 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 LIPGQ9Y5X9 500 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 CHD8Q9HCK8 2581 aa5.34□□□□□ -1.55
USP39-213ENST00000467885 IGF2RP11717 2491 aa5.34□□□□□ -1.56
USP39-213ENST00000467885 LAMA5O15230 3695 aa5.34□□□□□ -1.56
USP39-213ENST00000467885 NINQ8N4C6 2090 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 A0A1B0GTH9 108 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 UNC119BA6NIH7 251 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 ENO4A6NNW6 628 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 FAM47E-STBD1D6RA91 191 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 NPIPA5E9PKD4 350 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 H3BML4 177 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 KPNA4O00629 521 aaPredicted RBP5.33□□□□□ -1.56
USP39-213ENST00000467885 AQP7O14520 342 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 RAMP1O60894 148 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 PMS2P2O95744 297 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 HPRP00739 348 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 ADAP00813 363 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 MT-ATP6P00846 226 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 CRYABP02511 175 aaKnown RBP5.33□□□□□ -1.56
USP39-213ENST00000467885 TFPIP10646 304 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 GSTM3P21266 225 aa5.33□□□□□ -1.56
USP39-213ENST00000467885 ENPP1P22413 925 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms