RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 RETP07949 1114 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 RBP1P09455 135 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 OR56A5P0C7T3 313 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 RRASP10301 218 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 SPNP16150 400 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 HOXB8P17481 243 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 ANOS1P23352 680 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 PTBP1P26599 531 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 CD27P26842 260 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 STOMP27105 288 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 GTF2E2P29084 291 aaKnown RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 EPHX2P34913 555 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 CA5AP35218 305 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 TIMP3P35625 211 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 POLR2IP36954 125 aaKnown RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 GYG1P46976 350 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 NOVP48745 357 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 MRPL19P49406 292 aaKnown RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 GSK3BP49841 420 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 RAB13P51153 203 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 AKR1D1P51857 326 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 RAB4BP61018 213 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 RRAS2P62070 204 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 POLR2GP62487 172 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 SLC35A2P78381 396 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 EMX1Q04741 257 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 CACNG1Q06432 222 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 KRTAP1-1Q07627 177 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 CD47Q08722 323 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 CDH17Q12864 832 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 SLAMF1Q13291 335 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 RCAN2Q14206 197 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 TSNQ15631 228 aaKnown RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 GRK1Q15835 563 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 RBBP7Q16576 425 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 QRICH1Q2TAL8 776 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 HSDL1Q3SXM5 330 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 BCL7AQ4VC05 210 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 SUSD4Q5VX71 490 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 LYSMD4Q5XG99 296 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 ELP2Q6IA86 826 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 TATDN1Q6P1N9 297 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 TEX261Q6UWH6 196 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 GDPGP1Q6ZNW5 385 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 C15orf39Q6ZRI6 1047 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 RASSF6Q6ZTQ3 369 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 IL17RELQ6ZVW7 336 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 PGAP1Q75T13 922 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 GDPD3Q7L5L3 318 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 CMC1Q7Z7K0 106 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 GALNT10Q86SR1 603 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 ASPGQ86U10 573 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 CUZD1Q86UP6 607 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 KCNMB4Q86W47 210 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 RNF130Q86XS8 419 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 CBWD2Q8IUF1 395 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 FAM9CQ8IZT9 166 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 RDH10Q8IZV5 341 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 FAM83FQ8NEG4 500 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 OR10V1Q8NGI7 309 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 OR13C3Q8NGS6 347 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 CLHC1Q8NHS4 586 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 CDC26Q8NHZ8 85 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 RIT1Q92963 219 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 PYCR2Q96C36 320 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 ZNF524Q96C55 264 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 LRRC58Q96CX6 371 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 SPATA13Q96N96 652 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 ERMAPQ96PL5 475 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 TRNT1Q96Q11 434 aaKnown RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 RIT2Q99578 217 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 GPR22Q99680 433 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 MAP3K3Q99759 626 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 DHX35Q9H5Z1 703 aaKnown RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 FAM124BQ9H5Z6 455 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 MINDY3Q9H8M7 445 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 CYP3A43Q9HB55 503 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 BIN3Q9NQY0 253 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 CHRAC1Q9NRG0 131 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 MED9Q9NWA0 146 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 FBXL12Q9NXK8 326 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 WWOXQ9NZC7 414 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 RCOR3Q9P2K3 495 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 MLXQ9UH92 298 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 NARFQ9UHQ1 456 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 ELF5Q9UKW6 265 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 ACOT9Q9Y305 439 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 U3KQ87 197 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 U3KQV3 271 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 MYLKQ15746 1914 aa3.93□□□□□ -1.78
HMGB1P16-201ENST00000447155 COL5A2P05997 1499 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 COL1A2P08123 1366 aa3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 MYO18AQ92614 2054 aaKnown RBP3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 A0A0B4J203 849 aa3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 GLYATL1P3A0A0U1RQE8 302 aa3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 LOC100506127A0A0U1RQW1 187 aa3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 FAM240BA0A1B0GVZ2 78 aa3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 A0A1W2PP18 115 aa3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 PQLC2LA1A4F0 135 aa3.92□□□□□ -1.78
HMGB1P16-201ENST00000447155 FAM72CH0Y354 149 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms