RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 A8MVM7 634 aa18.23■□□□□ 0.51
SDC1-205ENST00000447124 ABCD4O14678 606 aa18.23■□□□□ 0.51
SDC1-205ENST00000447124 PTNP21246 168 aa18.23■□□□□ 0.51
SDC1-205ENST00000447124 AQP5P55064 265 aa18.23■□□□□ 0.51
SDC1-205ENST00000447124 STX1BP61266 288 aa18.23■□□□□ 0.51
SDC1-205ENST00000447124 COPZ1P61923 177 aa18.23■□□□□ 0.51
SDC1-205ENST00000447124 ZSWIM7Q19AV6 140 aa18.23■□□□□ 0.51
SDC1-205ENST00000447124 PRAMEF8Q5VWM4 474 aa18.23■□□□□ 0.51
SDC1-205ENST00000447124 PRAMEF7Q5VXH5 474 aa18.23■□□□□ 0.51
SDC1-205ENST00000447124 COMTD1Q86VU5 262 aa18.23■□□□□ 0.51
SDC1-205ENST00000447124 OR9K2Q8NGE7 335 aa18.23■□□□□ 0.51
SDC1-205ENST00000447124 TMEM45BQ96B21 275 aa18.23■□□□□ 0.51
SDC1-205ENST00000447124 SPDL1Q96EA4 605 aa18.23■□□□□ 0.51
SDC1-205ENST00000447124 SF3B5Q9BWJ5 86 aaKnown RBP18.23■□□□□ 0.51
SDC1-205ENST00000447124 AMBRA1Q9C0C7 1298 aa18.23■□□□□ 0.51
SDC1-205ENST00000447124 VAPAQ9P0L0 249 aa18.23■□□□□ 0.51
SDC1-205ENST00000447124 TRBV5-3A0A0A0MS03 114 aa18.22■□□□□ 0.51
SDC1-205ENST00000447124 A0A1W2PP18 115 aa18.22■□□□□ 0.51
SDC1-205ENST00000447124 TMEM247A6NEH6 219 aa18.22■□□□□ 0.51
SDC1-205ENST00000447124 FAM171A2A8MVW0 826 aa18.22■□□□□ 0.51
SDC1-205ENST00000447124 TMEM229AB2RXF0 380 aa18.22■□□□□ 0.51
SDC1-205ENST00000447124 ZNF83P51522 516 aa18.22■□□□□ 0.51
SDC1-205ENST00000447124 FADDQ13158 208 aa18.22■□□□□ 0.51
SDC1-205ENST00000447124 TNK1Q13470 666 aa18.22■□□□□ 0.51
SDC1-205ENST00000447124 C1orf140Q5VVS0 124 aa18.22■□□□□ 0.51
SDC1-205ENST00000447124 SSX8Q7RTT4 187 aa18.22■□□□□ 0.51
SDC1-205ENST00000447124 GOLGA6L1Q8N7Z2 621 aa18.22■□□□□ 0.51
SDC1-205ENST00000447124 TRAF4Q9BUZ4 470 aaPredicted RBP18.22■□□□□ 0.51
SDC1-205ENST00000447124 RAD21L1Q9H4I0 556 aa18.22■□□□□ 0.51
SDC1-205ENST00000447124 IKZF5Q9H5V7 419 aa18.22■□□□□ 0.51
SDC1-205ENST00000447124 UPB1Q9UBR1 384 aa18.22■□□□□ 0.51
SDC1-205ENST00000447124 JMJD1CQ15652 2540 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 E7EQL1 145 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 NR5A2O00482 541 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 NDUFS7O75251 213 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 ARAFP10398 606 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 NCF2P19878 526 aaPredicted RBP18.21■□□□□ 0.51
SDC1-205ENST00000447124 CD40P25942 277 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 SLC25A3Q00325 362 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 EGR4Q05215 589 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 SPOCK1Q08629 439 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 AGKQ53H12 422 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 OR7E24Q6IFN5 339 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 AAED1Q7RTV5 226 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 NFKBIDQ8NI38 313 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 BBS10Q8TAM1 723 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 PRR14Q9BWN1 585 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 HEATR1Q9H583 2144 aaKnown RBP18.21■□□□□ 0.51
SDC1-205ENST00000447124 ADPRHL2Q9NX46 363 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 DCTN4Q9UJW0 460 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 GMEB1Q9Y692 573 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 HIVEP2P31629 2446 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 ABCA2Q9BZC7 2435 aa18.21■□□□□ 0.51
SDC1-205ENST00000447124 FTCDNL1E5RQL4 147 aa18.2■□□□□ 0.5
SDC1-205ENST00000447124 TPST1O60507 370 aa18.2■□□□□ 0.5
SDC1-205ENST00000447124 CDH11P55287 796 aa18.2■□□□□ 0.5
SDC1-205ENST00000447124 CLEC12BQ2HXU8 276 aa18.2■□□□□ 0.5
SDC1-205ENST00000447124 TMEM225Q6GV28 225 aa18.2■□□□□ 0.5
SDC1-205ENST00000447124 CREB3L2Q70SY1 520 aa18.2■□□□□ 0.5
SDC1-205ENST00000447124 DTX2Q86UW9 622 aa18.2■□□□□ 0.5
SDC1-205ENST00000447124 EPHX4Q8IUS5 362 aa18.2■□□□□ 0.5
SDC1-205ENST00000447124 STK35Q8TDR2 534 aa18.2■□□□□ 0.5
SDC1-205ENST00000447124 GTPBP3Q969Y2 492 aaKnown RBP18.2■□□□□ 0.5
SDC1-205ENST00000447124 TRMT61AQ96FX7 289 aaKnown RBP18.2■□□□□ 0.5
SDC1-205ENST00000447124 PTDSS2Q9BVG9 487 aa18.2■□□□□ 0.5
SDC1-205ENST00000447124 TAPBPLQ9BX59 468 aa18.2■□□□□ 0.5
SDC1-205ENST00000447124 PIF1Q9H611 641 aa18.2■□□□□ 0.5
SDC1-205ENST00000447124 ARMC7Q9H6L4 198 aa18.2■□□□□ 0.5
SDC1-205ENST00000447124 SLC17A5Q9NRA2 495 aa18.2■□□□□ 0.5
SDC1-205ENST00000447124 IGHV4-39P01824 125 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 ETS2P15036 469 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 GPX2P18283 190 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 PTAFRP25105 342 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 MPGP29372 298 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 ATP4BP51164 291 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 LGALS3BPQ08380 585 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 ADRM1Q16186 407 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 GLIPR1L2Q4G1C9 344 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 GCNT6Q5T4J0 391 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 TMEM108Q6UXF1 575 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 DLEU7Q6UYE1 221 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 B3GLCTQ6Y288 498 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 GPAT4Q86UL3 456 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 PIAS4Q8N2W9 510 aaPredicted RBP18.19■□□□□ 0.5
SDC1-205ENST00000447124 KDM8Q8N371 416 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 SLC35B4Q969S0 331 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 KTI12Q96EK9 354 aaPredicted RBP18.19■□□□□ 0.5
SDC1-205ENST00000447124 THOC1Q96FV9 657 aaKnown RBP18.19■□□□□ 0.5
SDC1-205ENST00000447124 GRIP2Q9C0E4 1043 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 GDF2Q9UK05 429 aaPredicted RBP18.19■□□□□ 0.5
SDC1-205ENST00000447124 B3GALT5Q9Y2C3 310 aa18.19■□□□□ 0.5
SDC1-205ENST00000447124 C5orf58C9J3I9 102 aa18.18■□□□□ 0.5
SDC1-205ENST00000447124 M0R1B8 84 aa18.18■□□□□ 0.5
SDC1-205ENST00000447124 HTR2AP28223 471 aa18.18■□□□□ 0.5
SDC1-205ENST00000447124 PRKAR1BP31321 381 aa18.18■□□□□ 0.5
SDC1-205ENST00000447124 SELENOPP49908 381 aa18.18■□□□□ 0.5
SDC1-205ENST00000447124 CDK6Q00534 326 aa18.18■□□□□ 0.5
SDC1-205ENST00000447124 REEP3Q6NUK4 255 aa18.18■□□□□ 0.5
SDC1-205ENST00000447124 C1orf162Q8NEQ5 155 aaPredicted RBP18.18■□□□□ 0.5
SDC1-205ENST00000447124 MFSD8Q8NHS3 518 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms