RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 TAB1Q15750 504 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 TCTE1Q5JU00 501 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 C1orf189Q5VU69 101 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 RPL13AP3Q6NVV1 102 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 CREB3L2Q70SY1 520 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 HDDC2Q7Z4H3 204 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 GALNT11Q8NCW6 608 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 OR4C6Q8NH72 309 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 NEIL3Q8TAT5 605 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 ZMYND19Q96E35 227 aaPredicted RBP13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 DNAJA3Q96EY1 480 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 WDFY2Q96P53 400 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 NEDD4LQ96PU5 975 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 RNF32Q9H0A6 362 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 RPS6KB2Q9UBS0 482 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 MALT1Q9UDY8 824 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 CHRNA9Q9UGM1 479 aa13.9□□□□□ -0.18
SCAMP4-202ENST00000409472 A0A1B0GVT2 93 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 RNF13O43567 381 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 TFP02787 698 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 DCNP07585 359 aaKnown RBP13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 SBK2P0C263 348 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 RBM34P42696 430 aaKnown RBP13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 ACSM1Q08AH1 577 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 GLYR1Q49A26 553 aaPredicted RBP13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 KLHL26Q53HC5 615 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 FNDC7Q5VTL7 733 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 ZNF550Q7Z398 422 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 NRARPQ7Z6K4 114 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 ADAMTS18Q8TE60 1221 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 DNAJA4Q8WW22 397 aaPredicted RBP13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 PMEPA1Q969W9 287 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 ZDHHC12Q96GR4 267 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 CCDC120Q96HB5 630 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 AHCYL2Q96HN2 611 aaKnown RBP13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 GAL3ST4Q96RP7 486 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 UQCC2Q9BRT2 126 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 MED18Q9BUE0 208 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 RANGRFQ9HD47 186 aaPredicted RBP13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 COMMD3Q9UBI1 195 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 IER3IP1Q9Y5U9 82 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 A0A1W2PQ09 198 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 GTPBP1O00178 669 aaKnown RBP13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 SERPINI2O75830 405 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 PEPDP12955 493 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 ZNF3P17036 446 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 TALDO1P37837 337 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 OR12D2P58182 307 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 STARD6P59095 220 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 FAPQ12884 760 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 ARMC4Q5T2S8 1044 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 ARL9Q6T311 187 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 OR13C5Q8NGS8 318 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 OR5J2Q8NH18 312 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 RASD2Q96D21 266 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 C4orf36Q96KX1 117 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 SMAD5Q99717 465 aaKnown RBP13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 KLHL1Q9NR64 748 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 GLTPQ9NZD2 209 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 ZNF346Q9UL40 294 aaKnown RBP13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 TRAPPC4Q9Y296 219 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 PCNX3Q9H6A9 2034 aa13.89□□□□□ -0.19
SCAMP4-202ENST00000409472 NUP210LQ5VU65 1888 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 A0A087WUJ7 227 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 IGKV3D-11A0A0A0MRZ8 115 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 SLC22A31A6NKX4 558 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 ATP6V1G2-DDX39BF2Z307 99 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 DDAH2O95865 285 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 PDGFAP04085 211 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 GUSBP08236 651 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 SLC6A6P31641 620 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 NAA10P41227 235 aaPredicted RBP13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 FAM131AQ6UXB0 335 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 RTL4Q6ZR62 310 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 SHISA6Q6ZSJ9 500 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 TCTE3Q8IZS6 198 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 SMPDL3BQ92485 455 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 BABAM2Q9NXR7 383 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 EIF3KQ9UBQ5 218 aaKnown RBP13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 EPHA6Q9UF33 1036 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 CACNA1EQ15878 2313 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 BLACEA4D250 179 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 HPGDSO60760 199 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 RFX2P48378 723 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 ZP2Q05996 745 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 SKP2Q13309 424 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 GALEQ14376 348 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 TSSK4Q6SA08 328 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 TMPRSS9Q7Z410 1059 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 FAM98AQ8NCA5 519 aaKnown RBP13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 FAM71CQ8NEG0 241 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 MOSPD2Q8NHP6 518 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 SLC2A12Q8TD20 617 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 DEDD2Q8WXF8 326 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 SGTBQ96EQ0 304 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 DIRAS2Q96HU8 199 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 MOGAT1Q96PD6 335 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 ADOQ96SZ5 270 aa13.88□□□□□ -0.19
SCAMP4-202ENST00000409472 NMNAT3Q96T66 252 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms