RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 BST1Q10588 318 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 STX4Q12846 297 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 NSDHLQ15738 373 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 DCAF10Q5QP82 559 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 CCNYL2Q5T2Q4 361 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 ACSM2BQ68CK6 577 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 FAM180BQ6P0A1 224 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 PAPD4Q6PIY7 484 aaKnown RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 TMEM205Q6UW68 189 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 NDUFAF7Q7L592 441 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 CPEB2Q7Z5Q1 589 aaKnown RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 GPR180Q86V85 440 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 APLFQ8IW19 511 aaPredicted RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 OR4N5Q8IXE1 308 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 METTL4Q8N3J2 472 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 ZCCHC7Q8N3Z6 543 aaKnown RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 ZNF781Q8N8C0 355 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 CLEC1AQ8NC01 280 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 FDCSPQ8NFU4 85 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 OR2T11Q8NH01 316 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 OR5R1Q8NH85 324 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 C9orf43Q8TAL5 461 aaPredicted RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 DOK4Q8TEW6 326 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 TWIST2Q8WVJ9 160 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 CNDP1Q96KN2 507 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 FER1L6-AS2Q96M78 137 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 IP6K3Q96PC2 410 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 NR1H4Q96RI1 486 aaPredicted RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 NEURL2Q9BR09 285 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 PCGF1Q9BSM1 259 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 SLC25A23Q9BV35 468 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 NUDT9Q9BW91 350 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 ROGDIQ9GZN7 287 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 C20orf27Q9GZN8 174 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 TUBB1Q9H4B7 451 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 VIPAS39Q9H9C1 493 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 EML4Q9HC35 981 aaKnown RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 LYRM4Q9HD34 91 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 ZNF71Q9NQZ8 489 aaPredicted RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 PNO1Q9NRX1 252 aaKnown RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 ACSS1Q9NUB1 689 aaPredicted RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 LYARQ9NX58 379 aaKnown RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 GPR83Q9NYM4 423 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 C5AR2Q9P296 337 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 VPS29Q9UBQ0 182 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 C19orf25Q9UFG5 118 aaPredicted RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 ZDHHC2Q9UIJ5 367 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 PHF11Q9UIL8 331 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 HAO1Q9UJM8 370 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 SLC13A4Q9UKG4 626 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 FAF1Q9UNN5 650 aaPredicted RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 MMACHCQ9Y4U1 282 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 POLR3HQ9Y535 204 aaPredicted RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 ASB4Q9Y574 426 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 SPACA6W5XKT8 324 aa3.97□□□□□ -1.77
PMS1-202ENST00000374826 HELZ2Q9BYK8 2649 aaKnown RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 SPENQ96T58 3664 aaKnown RBP3.97□□□□□ -1.77
PMS1-202ENST00000374826 PTPN13Q12923 2485 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 TRBV11-1A0A0K0K1C0 115 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 ATP6AP2A0A1C7CYW4 349 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 SAGE2PA6NJ88 616 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 HMGB1P1B2RPK0 211 aaPredicted RBP3.96□□□□□ -1.78
PMS1-202ENST00000374826 H3BQF6 201 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 SLC28A1O00337 649 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 CLDN4O14493 209 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 PGRMC2O15173 223 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 ZNHIT1O43257 154 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 SEC22BO75396 215 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 ATP6AP2O75787 350 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 RSL1D1O76021 490 aaKnown RBP3.96□□□□□ -1.78
PMS1-202ENST00000374826 MYO1DO94832 1006 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 F10P00742 488 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 AMBPP02760 352 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 IFNA16P05015 189 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 IL10P22301 178 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 PIK3R1P27986 724 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 SERPINB5P36952 375 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 TSFMP43897 325 aaKnown RBP3.96□□□□□ -1.78
PMS1-202ENST00000374826 SLC1A6P48664 564 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 ARFIP1P53367 373 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 HSD17B7P56937 341 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 SLC26A5P58743 744 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 ACTN3Q08043 901 aaPredicted RBP3.96□□□□□ -1.78
PMS1-202ENST00000374826 ZNF763Q0D2J5 394 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 AIMP2Q13155 320 aaKnown RBP3.96□□□□□ -1.78
PMS1-202ENST00000374826 STX3Q13277 289 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 LACTB2Q53H82 288 aaPredicted RBP3.96□□□□□ -1.78
PMS1-202ENST00000374826 SOWAHCQ53LP3 525 aaPredicted RBP3.96□□□□□ -1.78
PMS1-202ENST00000374826 SPIN4Q56A73 249 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 DCST1Q5T197 706 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 NDUFAF5Q5TEU4 345 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 OR52E8Q6IFG1 317 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 DGAT2L6Q6ZPD8 337 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 LINC00696Q6ZRV3 163 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 PAGE2Q7Z2X7 111 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 ZNF595Q8IYB9 648 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 CLYBLQ8N0X4 340 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 KIF2BQ8N4N8 673 aa3.96□□□□□ -1.78
PMS1-202ENST00000374826 GBP7Q8N8V2 638 aaPredicted RBP3.96□□□□□ -1.78
PMS1-202ENST00000374826 PLPP5Q8NEB5 264 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms