RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 UBL3O95164 117 aa16.53■□□□□ 0.24
CD40-201ENST00000372276 CTSBP07858 339 aa16.53■□□□□ 0.24
CD40-201ENST00000372276 SPI1P17947 270 aa16.53■□□□□ 0.24
CD40-201ENST00000372276 ALAS2P22557 587 aa16.53■□□□□ 0.24
CD40-201ENST00000372276 SMAD4Q13485 552 aaKnown RBP16.53■□□□□ 0.24
CD40-201ENST00000372276 TDGQ13569 410 aa16.53■□□□□ 0.24
CD40-201ENST00000372276 C14orf28Q4W4Y0 310 aa16.53■□□□□ 0.24
CD40-201ENST00000372276 GPR139Q6DWJ6 353 aa16.53■□□□□ 0.24
CD40-201ENST00000372276 SLC35F3Q8IY50 421 aa16.53■□□□□ 0.24
CD40-201ENST00000372276 OR5J2Q8NH18 312 aa16.53■□□□□ 0.24
CD40-201ENST00000372276 TRMT10AQ8TBZ6 339 aaKnown RBP16.53■□□□□ 0.24
CD40-201ENST00000372276 LCORQ96JN0 433 aaPredicted RBP16.53■□□□□ 0.24
CD40-201ENST00000372276 WACQ9BTA9 647 aa16.53■□□□□ 0.24
CD40-201ENST00000372276 LMAN1LQ9HAT1 526 aa16.53■□□□□ 0.24
CD40-201ENST00000372276 B3GAT2Q9NPZ5 323 aa16.53■□□□□ 0.24
CD40-201ENST00000372276 ZNF275Q9NSD4 429 aaPredicted RBP16.53■□□□□ 0.24
CD40-201ENST00000372276 CUTCQ9NTM9 273 aa16.53■□□□□ 0.24
CD40-201ENST00000372276 ING3Q9NXR8 418 aa16.53■□□□□ 0.24
CD40-201ENST00000372276 AKAP7Q9P0M2 348 aaPredicted RBP16.53■□□□□ 0.24
CD40-201ENST00000372276 NCDNQ9UBB6 729 aa16.53■□□□□ 0.24
CD40-201ENST00000372276 MALT1Q9UDY8 824 aa16.53■□□□□ 0.24
CD40-201ENST00000372276 A0A0G2JK05 382 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 TRBV2A0A0J9YWF9 115 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 RHPN2P1A8MT19 583 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 FZD7O75084 574 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 ITGA10O75578 1167 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 TFP02787 698 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 CLPSP04118 112 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 AHCYP23526 432 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 ERP29P30040 261 aaKnown RBP16.52■□□□□ 0.24
CD40-201ENST00000372276 ACVR1BP36896 505 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 PPM1FP49593 454 aaPredicted RBP16.52■□□□□ 0.24
CD40-201ENST00000372276 SLC37A1P57057 533 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 SKP2Q13309 424 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 CCDC85BQ15834 202 aaPredicted RBP16.52■□□□□ 0.24
CD40-201ENST00000372276 ZNF74Q16587 644 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 TATDN3Q17R31 274 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 YIF1BQ5BJH7 314 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 NOXA1Q86UR1 476 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 TMEM151BQ8IW70 566 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 SHISA5Q8N114 240 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 C17orf47Q8NEP4 570 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 OR4M1Q8NGD0 313 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 RPS4Y2Q8TD47 263 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 ADAMTS14Q8WXS8 1223 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 THRSPQ92748 146 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 HSPA12BQ96MM6 686 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 TGM7Q96PF1 710 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 PHF7Q9BWX1 381 aaPredicted RBP16.52■□□□□ 0.24
CD40-201ENST00000372276 TP63Q9H3D4 680 aaPredicted RBP16.52■□□□□ 0.24
CD40-201ENST00000372276 NANSQ9NR45 359 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 KLHL1Q9NR64 748 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 LANCL2Q9NS86 450 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 COL6A3P12111 3177 aa16.52■□□□□ 0.24
CD40-201ENST00000372276 TDRD6O60522 2096 aaKnown RBP16.52■□□□□ 0.24
CD40-201ENST00000372276 A0A0G2JMP0 313 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 A0A0X1KG70 313 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 A0A1W2PQD3 144 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 CTDSPLO15194 276 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 EIF4E2O60573 245 aaKnown RBP16.52■□□□□ 0.23
CD40-201ENST00000372276 TPPPO94811 219 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 ZNF432O94892 652 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 UTS2O95399 124 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 HIST1H2ABP04908 130 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 GYPBP06028 91 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 EDNRAP25101 427 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 CENPAP49450 140 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 ARL4DP49703 201 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 MMP15P51511 669 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 ERV3-1Q14264 604 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 ELAVL1Q15717 326 aaKnown RBP16.52■□□□□ 0.23
CD40-201ENST00000372276 TP53I3Q53FA7 332 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 TMEM53Q6P2H8 277 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 HIST3H2AQ7L7L0 130 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 SLC16A9Q7RTY1 509 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 NR2C2APQ86WQ0 139 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 FRMD1Q8N878 549 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 OR4M2Q8NGB6 313 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 PHOSPHO1Q8TCT1 267 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 UBASH3BQ8TF42 649 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 PTPMT1Q8WUK0 201 aaPredicted RBP16.52■□□□□ 0.23
CD40-201ENST00000372276 C15orf40Q8WUR7 153 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 HIST1H2ACQ93077 130 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 NIPAL2Q9H841 368 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 RXFP3Q9NSD7 469 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 FBXL4Q9UKA2 621 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 SPATA2Q9UM82 520 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 CAMK2AQ9UQM7 478 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 CLCA3PQ9Y6N3 262 aa16.52■□□□□ 0.23
CD40-201ENST00000372276 REV3LO60673 3130 aa16.51■□□□□ 0.23
CD40-201ENST00000372276 INMT-MINDY4F8WBC2 141 aa16.51■□□□□ 0.23
CD40-201ENST00000372276 PHYHO14832 338 aa16.51■□□□□ 0.23
CD40-201ENST00000372276 DHFRP00374 187 aa16.51■□□□□ 0.23
CD40-201ENST00000372276 WNT1P04628 370 aa16.51■□□□□ 0.23
CD40-201ENST00000372276 EPXP11678 715 aa16.51■□□□□ 0.23
CD40-201ENST00000372276 MAPK3P27361 379 aaPredicted RBP16.51■□□□□ 0.23
CD40-201ENST00000372276 SLC6A1P30531 599 aa16.51■□□□□ 0.23
CD40-201ENST00000372276 SDHAP31040 664 aa16.51■□□□□ 0.23
CD40-201ENST00000372276 HSD11B2P80365 405 aa16.51■□□□□ 0.23
CD40-201ENST00000372276 CDK10Q15131 360 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms