RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 CES1P1Q9UKY3 287 aa11.54□□□□□ -0.56
UBXN4-201ENST00000272638 MMP17Q9ULZ9 603 aa11.54□□□□□ -0.56
UBXN4-201ENST00000272638 UBE2QL1A1L167 161 aa11.54□□□□□ -0.56
UBXN4-201ENST00000272638 ARRDC5A6NEK1 342 aa11.54□□□□□ -0.56
UBXN4-201ENST00000272638 KDM4EB2RXH2 506 aaPredicted RBP11.54□□□□□ -0.56
UBXN4-201ENST00000272638 PPM1BO75688 479 aa11.54□□□□□ -0.56
UBXN4-201ENST00000272638 EPPINO95925 133 aa11.54□□□□□ -0.56
UBXN4-201ENST00000272638 C4orf46Q504U0 113 aa11.54□□□□□ -0.56
UBXN4-201ENST00000272638 CBLN3Q6UW01 205 aa11.54□□□□□ -0.56
UBXN4-201ENST00000272638 ZNF782Q6ZMW2 699 aaPredicted RBP11.54□□□□□ -0.56
UBXN4-201ENST00000272638 OR2L13Q8N349 312 aa11.54□□□□□ -0.56
UBXN4-201ENST00000272638 NARS2Q96I59 477 aaKnown RBP11.54□□□□□ -0.56
UBXN4-201ENST00000272638 RCE1Q9Y256 329 aa11.54□□□□□ -0.56
UBXN4-201ENST00000272638 FAM47E-STBD1D6RA91 191 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 CHP2O43745 196 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 SFTPDP35247 375 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 SIRPAP78324 504 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 LRRC37A5PQ49AS3 106 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 ZNF613Q6PF04 617 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 LRRN1Q6UXK5 716 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 CDH24Q86UP0 819 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 GRPEL2Q8TAA5 225 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 ZNF775Q96BV0 537 aaPredicted RBP11.53□□□□□ -0.56
UBXN4-201ENST00000272638 TXNDC15Q96J42 360 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 DERL3Q96Q80 235 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 ORAI3Q9BRQ5 295 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 PPIL3Q9H2H8 161 aaKnown RBP11.53□□□□□ -0.56
UBXN4-201ENST00000272638 RPH3AQ9Y2J0 694 aaPredicted RBP11.53□□□□□ -0.56
UBXN4-201ENST00000272638 PCDHGB2Q9Y5G2 931 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 A0A1W2PQ72 361 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 B4DXG7 233 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 C5orf67F2Z3F1 127 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 GATBO75879 557 aaKnown RBP11.53□□□□□ -0.56
UBXN4-201ENST00000272638 CD2P06729 351 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 EIF4EP06730 217 aaKnown RBP11.53□□□□□ -0.56
UBXN4-201ENST00000272638 TSFMP43897 325 aaKnown RBP11.53□□□□□ -0.56
UBXN4-201ENST00000272638 NRG3P56975 720 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 FGFBP1Q14512 234 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 IRF3Q14653 427 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 METAP1DQ6UB28 335 aaPredicted RBP11.53□□□□□ -0.56
UBXN4-201ENST00000272638 RASGRP3Q8IV61 690 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 CEP76Q8TAP6 659 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 MICU1Q9BPX6 476 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 OR11A1Q9GZK7 315 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 CDCP1Q9H5V8 836 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 FBRSQ9HAH7 460 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 TBC1D24Q9ULP9 559 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 MRPS17Q9Y2R5 130 aaKnown RBP11.53□□□□□ -0.56
UBXN4-201ENST00000272638 SLCO1B1Q9Y6L6 691 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 TPRP12270 2363 aaKnown RBP11.53□□□□□ -0.56
UBXN4-201ENST00000272638 NPIPA5E9PKD4 350 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 LIMS1P48059 325 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 LRRC69Q6ZNQ3 347 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 GALNTL5Q7Z4T8 443 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 DEDD2Q8WXF8 326 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 CMKLR1Q99788 373 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 LRRC61Q9BV99 259 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 DPCDQ9BVM2 203 aaPredicted RBP11.53□□□□□ -0.56
UBXN4-201ENST00000272638 CMC2Q9NRP2 79 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 FKBP14Q9NWM8 211 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 PLEKHB1Q9UF11 243 aaPredicted RBP11.53□□□□□ -0.56
UBXN4-201ENST00000272638 NPIPA1Q9UND3 350 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 A3GALT2U3KPV4 340 aa11.53□□□□□ -0.56
UBXN4-201ENST00000272638 CTNSO60931 367 aa11.52□□□□□ -0.56
UBXN4-201ENST00000272638 ZIC2O95409 532 aaPredicted RBP11.52□□□□□ -0.56
UBXN4-201ENST00000272638 HEXBP07686 556 aa11.52□□□□□ -0.56
UBXN4-201ENST00000272638 DGCR2P98153 550 aa11.52□□□□□ -0.56
UBXN4-201ENST00000272638 PITPNAQ00169 270 aa11.52□□□□□ -0.56
UBXN4-201ENST00000272638 GALK2Q01415 458 aa11.52□□□□□ -0.56
UBXN4-201ENST00000272638 MLC1Q15049 377 aa11.52□□□□□ -0.56
UBXN4-201ENST00000272638 AADACL4Q5VUY2 407 aa11.52□□□□□ -0.56
UBXN4-201ENST00000272638 YOD1Q5VVQ6 348 aaPredicted RBP11.52□□□□□ -0.56
UBXN4-201ENST00000272638 VASH1Q7L8A9 365 aaPredicted RBP11.52□□□□□ -0.56
UBXN4-201ENST00000272638 BCORP1Q8N888 145 aa11.52□□□□□ -0.56
UBXN4-201ENST00000272638 OR5H6Q8NGV6 325 aa11.52□□□□□ -0.56
UBXN4-201ENST00000272638 OR5AK2Q8NH90 309 aa11.52□□□□□ -0.56
UBXN4-201ENST00000272638 DNAJA4Q8WW22 397 aaPredicted RBP11.52□□□□□ -0.56
UBXN4-201ENST00000272638 OR2B2Q9GZK3 357 aa11.52□□□□□ -0.56
UBXN4-201ENST00000272638 ZNF350Q9GZX5 532 aa11.52□□□□□ -0.56
UBXN4-201ENST00000272638 METTL7AQ9H8H3 244 aa11.52□□□□□ -0.56
UBXN4-201ENST00000272638 B3GAT2Q9NPZ5 323 aa11.52□□□□□ -0.56
UBXN4-201ENST00000272638 UBQLN4Q9NRR5 601 aa11.52□□□□□ -0.56
UBXN4-201ENST00000272638 RBFOX1Q9NWB1 397 aaKnown RBP11.52□□□□□ -0.56
UBXN4-201ENST00000272638 SIRT4Q9Y6E7 314 aaPredicted RBP11.52□□□□□ -0.56
UBXN4-201ENST00000272638 RIF1Q5UIP0 2472 aaKnown RBP11.52□□□□□ -0.56
UBXN4-201ENST00000272638 TRAV18A0A075B6X5 111 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 FXYD6-FXYD2A0A087WZ82 144 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 C17orf51A8MQB3 221 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 H2AFB2P0C5Z0 115 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 ARFIP1P53367 373 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 ADAM8P78325 824 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 FAM53BQ14153 422 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 FCN2Q15485 313 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 VASNQ6EMK4 673 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 GPR155Q7Z3F1 870 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 IL17RDQ8NFM7 739 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 ATOH1Q92858 354 aaPredicted RBP11.52□□□□□ -0.57
UBXN4-201ENST00000272638 DAZLQ92904 295 aaKnown RBP11.52□□□□□ -0.57
UBXN4-201ENST00000272638 FAM46BQ96A09 425 aa11.52□□□□□ -0.57
UBXN4-201ENST00000272638 FXYD6Q9H0Q3 95 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms