RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Surf4Q64310 269 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 St8sia1Q64687 355 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Zfp119bQ8K0G9 543 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Zbtb20Q8K0L9 741 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Mcfd2Q8K5B2 145 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Fahd1Q8R0F8 227 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Lrrc61Q8R2R5 259 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Rhbdl1Q8VC82 373 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Med9Q8VCS6 142 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Basp1Q91XV3 226 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 OgfrQ99PG2 633 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Q9CPZ3 230 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Tmem179bQ9CY24 219 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Rnase10Q9D5A9 208 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Fank1Q9DAM9 344 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Vmn1r53Q9EP93 310 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Fstl3Q9EQC7 256 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Jmjd6Q9ERI5 403 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Nrip3Q9JJR9 240 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Acss2Q9QXG4 701 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Cyp11a1Q9QZ82 526 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Lrit3W8DXL4 681 aa13.58□□□□□ -0.24
Nup88-202ENSMUST00000108530 Col4a2P08122 1707 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 A0A286YD17 136 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Olfr619E9PV95 320 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Tmem200cJ3QK46 637 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Zfp870J3QMA4 560 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Vmn2r95L7N274 845 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Hoxd9P28357 339 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Klf16P58334 251 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Ppp1r14bQ62084 147 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Carns1Q6ZPS2 827 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Fpr-rs7Q71MR7 338 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Cpeb4Q7TN98 729 aaKnown RBP13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Luzp2Q8BGY3 345 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Nyap2Q8BM65 682 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 C130079G13RikQ8BUY2 280 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Pphln1Q8K2H1 381 aaKnown RBP13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Olfr769Q8K501 312 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Mterf3Q8R3J4 412 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Olfr683Q8VGV1 319 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Q99K99 313 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Mrpl24Q9CQ06 216 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Abcb8Q9CXJ4 717 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Zfp383A0A087WRR7 490 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Tmem229aB9EJI9 371 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Fam71dD3YV92 440 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Gm21800J3QMJ9 180 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Olfr190K7N5T5 307 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Olfr889L7N1Y6 314 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 StsP50427 624 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Alox12eP55249 662 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Fxyd2Q04646 70 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Tubal3Q3UX10 446 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Zfp235Q499D5 702 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 AY358078Q6UY53 465 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Hs6st2Q80UW0 612 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Armcx6Q8K3A6 301 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Mrps18cQ8R2L5 143 aaKnown RBP13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Acy3Q91XE4 318 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Tssk6Q925K9 273 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Lactb2Q99KR3 288 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Q9CQF4 240 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Lrrc51Q9DAK8 192 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Zc3h8Q9JJ48 305 aaKnown RBP13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Lancl2Q9JJK2 450 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Opn4Q9QXZ9 521 aa13.57□□□□□ -0.24
Nup88-202ENSMUST00000108530 Ralgapa1Q6GYP7 2035 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Zfp534A2A7A1 661 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 4930595D18RikD3Z642 64 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Etv1P41164 477 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Opn1swP51491 346 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Sirt6P59941 334 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Pou3f4P62515 361 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 SgcdP82347 289 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Man1c1Q6NXK9 625 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Mfsd4aQ6PDC8 510 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 PigvQ7TPN3 493 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 2810021J22RikQ8BIB6 539 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 MaelQ8BVN9 434 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 P2rx2Q8K3P1 485 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Ahsa2Q8N9S3 331 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Mapre2Q8R001 326 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Olfr812Q8VG64 310 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Snx4Q91YJ2 450 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Olfr114Q923Q8 312 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Etv5Q9CXC9 510 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Obp1aQ9D3H2 163 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 HrgQ9ESB3 525 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Trim2Q9ESN6 744 aaKnown RBP13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Wdr12Q9JJA4 423 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 ClnkQ9QZE2 435 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Cabin1G3X8Q1 2187 aaKnown RBP13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 ItpkbB2RXC2 942 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 FxnO35943 207 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Cr2P19070 1025 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Gstm3P19639 218 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 FshrP35378 692 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 MatkP41242 505 aa13.56□□□□□ -0.24
Nup88-202ENSMUST00000108530 Thnsl2Q80W22 483 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 101.7 ms