RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 BEND3Q5T5X7 828 aa22.05■■□□□ 1.12
PHGDH-227ENST00000641811 UBE3BQ7Z3V4 1068 aa22.05■■□□□ 1.12
PHGDH-227ENST00000641811 CCDC85AQ96PX6 553 aaPredicted RBP22.05■■□□□ 1.12
PHGDH-227ENST00000641811 ATP6V0A2Q9Y487 856 aa22.05■■□□□ 1.12
PHGDH-227ENST00000641811 CDHR2Q9BYE9 1310 aa22.05■■□□□ 1.12
PHGDH-227ENST00000641811 CC2D2BQ6DHV5 1058 aa22.04■■□□□ 1.12
PHGDH-227ENST00000641811 CELF1Q92879 486 aaKnown RBP22.04■■□□□ 1.12
PHGDH-227ENST00000641811 HSP90B1P14625 803 aaKnown RBP22.03■■□□□ 1.12
PHGDH-227ENST00000641811 SLC4A10Q6U841 1118 aa22.03■■□□□ 1.12
PHGDH-227ENST00000641811 SEC31BQ9NQW1 1179 aa22.03■■□□□ 1.12
PHGDH-227ENST00000641811 PSMD1Q99460 953 aa22.02■■□□□ 1.12
PHGDH-227ENST00000641811 TIAM2Q8IVF5 1701 aa22.02■■□□□ 1.12
PHGDH-227ENST00000641811 CASP7P55210 303 aa22.01■■□□□ 1.11
PHGDH-227ENST00000641811 ALDH1L2Q3SY69 923 aa22.01■■□□□ 1.11
PHGDH-227ENST00000641811 SP8Q8IXZ3 490 aa22.01■■□□□ 1.11
PHGDH-227ENST00000641811 NMRK2Q9NPI5 230 aa22.01■■□□□ 1.11
PHGDH-227ENST00000641811 SMC4Q9NTJ3 1288 aa22.01■■□□□ 1.11
PHGDH-227ENST00000641811 CTSWP56202 376 aa22■■□□□ 1.11
PHGDH-227ENST00000641811 CCDC152Q4G0S7 254 aa22■■□□□ 1.11
PHGDH-227ENST00000641811 TMX4Q9H1E5 349 aaPredicted RBP22■■□□□ 1.11
PHGDH-227ENST00000641811 ZC3H4Q9UPT8 1303 aaKnown RBP22■■□□□ 1.11
PHGDH-227ENST00000641811 CT47B1P0C2W7 299 aaPredicted RBP21.99■■□□□ 1.11
PHGDH-227ENST00000641811 IARSP41252 1262 aaKnown RBP21.99■■□□□ 1.11
PHGDH-227ENST00000641811 RPS8P62241 208 aaKnown RBP21.99■■□□□ 1.11
PHGDH-227ENST00000641811 TTLL11Q8NHH1 800 aa21.99■■□□□ 1.11
PHGDH-227ENST00000641811 DICER1Q9UPY3 1922 aaKnown RBP21.99■■□□□ 1.11
PHGDH-227ENST00000641811 GRIPAP1Q4V328 841 aa21.98■■□□□ 1.11
PHGDH-227ENST00000641811 PTPRCP08575 1304 aa21.98■■□□□ 1.11
PHGDH-227ENST00000641811 KDM2BQ8NHM5 1336 aa21.98■■□□□ 1.11
PHGDH-227ENST00000641811 GLTPD2A6NH11 291 aa21.97■■□□□ 1.11
PHGDH-227ENST00000641811 KIF3CO14782 793 aa21.97■■□□□ 1.11
PHGDH-227ENST00000641811 DPP8Q6V1X1 898 aaPredicted RBP21.97■■□□□ 1.11
PHGDH-227ENST00000641811 MPNDQ8N594 471 aa21.97■■□□□ 1.11
PHGDH-227ENST00000641811 SRCIN1Q9C0H9 1055 aa21.97■■□□□ 1.11
PHGDH-227ENST00000641811 COL4A5P29400 1685 aa21.96■■□□□ 1.11
PHGDH-227ENST00000641811 ALDH1L1O75891 902 aa21.96■■□□□ 1.11
PHGDH-227ENST00000641811 RARSP54136 660 aaKnown RBP21.96■■□□□ 1.11
PHGDH-227ENST00000641811 TMC4Q7Z404 712 aa21.96■■□□□ 1.11
PHGDH-227ENST00000641811 GREM2Q9H772 168 aa21.96■■□□□ 1.11
PHGDH-227ENST00000641811 RRAGCQ9HB90 399 aa21.96■■□□□ 1.11
PHGDH-227ENST00000641811 PLA2G12BQ9BX93 195 aa21.95■■□□□ 1.1
PHGDH-227ENST00000641811 GRM8O00222 908 aa21.94■■□□□ 1.1
PHGDH-227ENST00000641811 GPSM2P81274 684 aa21.94■■□□□ 1.1
PHGDH-227ENST00000641811 AOC3Q16853 763 aa21.94■■□□□ 1.1
PHGDH-227ENST00000641811 DPY19L2Q6NUT2 758 aa21.94■■□□□ 1.1
PHGDH-227ENST00000641811 LARGE2Q8N3Y3 721 aa21.94■■□□□ 1.1
PHGDH-227ENST00000641811 RTFDC1Q9BY42 306 aaPredicted RBP21.94■■□□□ 1.1
PHGDH-227ENST00000641811 C9orf78Q9NZ63 289 aaPredicted RBP21.94■■□□□ 1.1
PHGDH-227ENST00000641811 NOB1Q9ULX3 412 aaKnown RBP21.94■■□□□ 1.1
PHGDH-227ENST00000641811 ZBED9Q6R2W3 1325 aa21.94■■□□□ 1.1
PHGDH-227ENST00000641811 LRRC37AA6NMS7 1700 aa21.94■■□□□ 1.1
PHGDH-227ENST00000641811 DDNO94850 711 aaPredicted RBP21.93■■□□□ 1.1
PHGDH-227ENST00000641811 ANKRD18AQ8IVF6 992 aa21.93■■□□□ 1.1
PHGDH-227ENST00000641811 ZNF541Q9H0D2 1346 aa21.93■■□□□ 1.1
PHGDH-227ENST00000641811 NSFL1CQ9UNZ2 370 aaKnown RBP21.93■■□□□ 1.1
PHGDH-227ENST00000641811 MYH3P11055 1940 aa21.92■■□□□ 1.1
PHGDH-227ENST00000641811 PPIP5K2O43314 1243 aa21.92■■□□□ 1.1
PHGDH-227ENST00000641811 CSF1RP07333 972 aa21.92■■□□□ 1.1
PHGDH-227ENST00000641811 C1QTNF8P60827 252 aa21.92■■□□□ 1.1
PHGDH-227ENST00000641811 FOXO4P98177 505 aa21.92■■□□□ 1.1
PHGDH-227ENST00000641811 FAM161AQ3B820 660 aa21.92■■□□□ 1.1
PHGDH-227ENST00000641811 EPHA10Q5JZY3 1008 aa21.92■■□□□ 1.1
PHGDH-227ENST00000641811 SUPT20HQ8NEM7 779 aa21.92■■□□□ 1.1
PHGDH-227ENST00000641811 JDP2Q8WYK2 163 aa21.92■■□□□ 1.1
PHGDH-227ENST00000641811 DUOX1Q9NRD9 1551 aa21.91■■□□□ 1.1
PHGDH-227ENST00000641811 RTL9Q8NET4 1388 aa21.91■■□□□ 1.1
PHGDH-227ENST00000641811 FZD9O00144 591 aa21.91■■□□□ 1.1
PHGDH-227ENST00000641811 CDC5LQ99459 802 aaKnown RBP21.91■■□□□ 1.1
PHGDH-227ENST00000641811 POTECB2RU33 542 aa21.9■■□□□ 1.1
PHGDH-227ENST00000641811 NBPF7P0C2Y1 421 aaPredicted RBP21.9■■□□□ 1.1
PHGDH-227ENST00000641811 ITGA6P23229 1130 aa21.9■■□□□ 1.1
PHGDH-227ENST00000641811 BRPF1P55201 1214 aaPredicted RBP21.9■■□□□ 1.1
PHGDH-227ENST00000641811 POLLQ9UGP5 575 aa21.9■■□□□ 1.1
PHGDH-227ENST00000641811 BCAR3O75815 825 aa21.89■■□□□ 1.09
PHGDH-227ENST00000641811 NIM1KQ8IY84 436 aa21.89■■□□□ 1.09
PHGDH-227ENST00000641811 GPR101Q96P66 508 aaPredicted RBP21.89■■□□□ 1.09
PHGDH-227ENST00000641811 C6orf229H3BNL8 230 aa21.88■■□□□ 1.09
PHGDH-227ENST00000641811 KIAA2012Q0VF49 1180 aa21.88■■□□□ 1.09
PHGDH-227ENST00000641811 LMBR1LQ6UX01 489 aa21.88■■□□□ 1.09
PHGDH-227ENST00000641811 SUCLG2Q96I99 432 aa21.88■■□□□ 1.09
PHGDH-227ENST00000641811 ANKIB1Q9P2G1 1089 aa21.88■■□□□ 1.09
PHGDH-227ENST00000641811 CHMP3Q9Y3E7 222 aa21.88■■□□□ 1.09
PHGDH-227ENST00000641811 RIMBP2O15034 1052 aa21.87■■□□□ 1.09
PHGDH-227ENST00000641811 VEGFAP15692 232 aaPredicted RBP21.87■■□□□ 1.09
PHGDH-227ENST00000641811 TBC1D16Q8TBP0 767 aa21.87■■□□□ 1.09
PHGDH-227ENST00000641811 KAZALD1Q96I82 304 aa21.87■■□□□ 1.09
PHGDH-227ENST00000641811 VPS33BQ9H267 617 aa21.87■■□□□ 1.09
PHGDH-227ENST00000641811 LTBP1Q14766 1721 aa21.86■■□□□ 1.09
PHGDH-227ENST00000641811 UTYO14607 1347 aa21.86■■□□□ 1.09
PHGDH-227ENST00000641811 SPEF2Q9C093 1822 aa21.86■■□□□ 1.09
PHGDH-227ENST00000641811 WASHC4Q2M389 1173 aa21.86■■□□□ 1.09
PHGDH-227ENST00000641811 API5Q9BZZ5 524 aaKnown RBP21.86■■□□□ 1.09
PHGDH-227ENST00000641811 USP44Q9H0E7 712 aa21.86■■□□□ 1.09
PHGDH-227ENST00000641811 BSDC1Q9NW68 430 aaPredicted RBP21.86■■□□□ 1.09
PHGDH-227ENST00000641811 PODXL2Q9NZ53 605 aa21.86■■□□□ 1.09
PHGDH-227ENST00000641811 MINPP1Q9UNW1 487 aa21.86■■□□□ 1.09
PHGDH-227ENST00000641811 WDR90Q96KV7 1748 aa21.86■■□□□ 1.09
PHGDH-227ENST00000641811 WTIPA6NIX2 430 aaPredicted RBP21.85■■□□□ 1.09
PHGDH-227ENST00000641811 UFL1O94874 794 aa21.85■■□□□ 1.09
PHGDH-227ENST00000641811 IGHMBP2P38935 993 aaKnown RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms