RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 LMBR1LQ6UX01 489 aa20.08■□□□□ 0.8
PHGDH-223ENST00000641597 NBPF15Q8N660 670 aa20.08■□□□□ 0.8
PHGDH-223ENST00000641597 HDAC5Q9UQL6 1122 aa20.08■□□□□ 0.8
PHGDH-223ENST00000641597 ATF3P18847 181 aa20.07■□□□□ 0.8
PHGDH-223ENST00000641597 CAMK4Q16566 473 aa20.07■□□□□ 0.8
PHGDH-223ENST00000641597 TTLL7Q6ZT98 887 aa20.07■□□□□ 0.8
PHGDH-223ENST00000641597 DDX11Q96FC9 970 aa20.07■□□□□ 0.8
PHGDH-223ENST00000641597 SH2B1Q9NRF2 756 aaPredicted RBP20.07■□□□□ 0.8
PHGDH-223ENST00000641597 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.07■□□□□ 0.82e-6■■■■■ 31.1
PHGDH-223ENST00000641597 AP5Z1O43299 807 aa20.07■□□□□ 0.8
PHGDH-223ENST00000641597 RPS6KB1P23443 525 aa20.07■□□□□ 0.8
PHGDH-223ENST00000641597 CABP4P57796 275 aa20.07■□□□□ 0.8
PHGDH-223ENST00000641597 COPRSQ9NQ92 184 aa20.07■□□□□ 0.8
PHGDH-223ENST00000641597 TMEM94Q12767 1356 aa20.06■□□□□ 0.8
PHGDH-223ENST00000641597 HS1BP3Q53T59 392 aa20.06■□□□□ 0.8
PHGDH-223ENST00000641597 ZSCAN31Q96LW9 406 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-223ENST00000641597 ZNF609O15014 1411 aa20.06■□□□□ 0.8
PHGDH-223ENST00000641597 FOSBP53539 338 aa20.06■□□□□ 0.8
PHGDH-223ENST00000641597 TIMM10P62072 90 aa20.06■□□□□ 0.8
PHGDH-223ENST00000641597 ZNF594Q96JF6 807 aaPredicted RBP20.06■□□□□ 0.8
PHGDH-223ENST00000641597 ALS2Q96Q42 1657 aa20.06■□□□□ 0.8
PHGDH-223ENST00000641597 PHF14O94880 888 aa20.05■□□□□ 0.8
PHGDH-223ENST00000641597 DCAF5Q96JK2 942 aa20.05■□□□□ 0.8
PHGDH-223ENST00000641597 FMNL2Q96PY5 1086 aa20.05■□□□□ 0.8
PHGDH-223ENST00000641597 ZNF500O60304 480 aaPredicted RBP20.05■□□□□ 0.8
PHGDH-223ENST00000641597 A1BGP04217 495 aa20.05■□□□□ 0.8
PHGDH-223ENST00000641597 LIG1P18858 919 aa20.05■□□□□ 0.8
PHGDH-223ENST00000641597 TTC12Q9H892 705 aaPredicted RBP20.05■□□□□ 0.8
PHGDH-223ENST00000641597 CCDC39Q9UFE4 941 aa20.05■□□□□ 0.8
PHGDH-223ENST00000641597 ADCY5O95622 1261 aa20.04■□□□□ 0.8
PHGDH-223ENST00000641597 NEUROD6Q96NK8 337 aa20.04■□□□□ 0.8
PHGDH-223ENST00000641597 SNRKQ9NRH2 765 aa20.04■□□□□ 0.8
PHGDH-223ENST00000641597 AFDNP55196 1824 aaKnown RBP20.04■□□□□ 0.8
PHGDH-223ENST00000641597 HIP1O00291 1037 aa20.04■□□□□ 0.8
PHGDH-223ENST00000641597 CASP7P55210 303 aa20.04■□□□□ 0.8
PHGDH-223ENST00000641597 ZBTB3Q9H5J0 574 aa20.04■□□□□ 0.8
PHGDH-223ENST00000641597 ADAMTSL3P82987 1691 aa20.04■□□□□ 0.8
PHGDH-223ENST00000641597 CYP21A2P08686 494 aa20.03■□□□□ 0.8
PHGDH-223ENST00000641597 ATP5JP18859 108 aa20.03■□□□□ 0.8
PHGDH-223ENST00000641597 MST1RQ04912 1400 aa20.03■□□□□ 0.8
PHGDH-223ENST00000641597 PRKCSHP14314 528 aaPredicted RBP20.03■□□□□ 0.8
PHGDH-223ENST00000641597 PSMA5P28066 241 aa20.03■□□□□ 0.8
PHGDH-223ENST00000641597 RBM10P98175 930 aaKnown RBP20.03■□□□□ 0.8
PHGDH-223ENST00000641597 FUCA2Q9BTY2 467 aa20.03■□□□□ 0.8
PHGDH-223ENST00000641597 ATP6V1DQ9Y5K8 247 aa20.03■□□□□ 0.8
PHGDH-223ENST00000641597 RABL6Q3YEC7 729 aaPredicted RBP20.02■□□□□ 0.8
PHGDH-223ENST00000641597 STOX1Q6ZVD7 989 aa20.02■□□□□ 0.8
PHGDH-223ENST00000641597 CCDC85AQ96PX6 553 aaPredicted RBP20.02■□□□□ 0.8
PHGDH-223ENST00000641597 RNF20Q5VTR2 975 aa20.02■□□□□ 0.8
PHGDH-223ENST00000641597 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.01■□□□□ 0.79
PHGDH-223ENST00000641597 GOLIM4O00461 696 aa20.01■□□□□ 0.79
PHGDH-223ENST00000641597 LRRC24Q50LG9 513 aa20.01■□□□□ 0.79
PHGDH-223ENST00000641597 ZNF330Q9Y3S2 320 aaPredicted RBP20.01■□□□□ 0.79
PHGDH-223ENST00000641597 FOXO4P98177 505 aa20.01■□□□□ 0.79
PHGDH-223ENST00000641597 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.01■□□□□ 0.79
PHGDH-223ENST00000641597 Q6ZUG5 572 aa20.01■□□□□ 0.79
PHGDH-223ENST00000641597 CKAP2LQ8IYA6 745 aa20.01■□□□□ 0.79
PHGDH-223ENST00000641597 COL18A1P39060 1754 aa20.01■□□□□ 0.79
PHGDH-223ENST00000641597 MRC1P22897 1456 aa20■□□□□ 0.79
PHGDH-223ENST00000641597 CHST3Q7LGC8 479 aa20■□□□□ 0.79
PHGDH-223ENST00000641597 ATG9AQ7Z3C6 839 aa20■□□□□ 0.79
PHGDH-223ENST00000641597 ARFGEF2Q9Y6D5 1785 aa20■□□□□ 0.79
PHGDH-223ENST00000641597 HSP90AA2PQ14568 343 aaPredicted RBP19.99■□□□□ 0.79
PHGDH-223ENST00000641597 NEK1Q96PY6 1258 aa19.99■□□□□ 0.79
PHGDH-223ENST00000641597 PUS3Q9BZE2 481 aaKnown RBP19.99■□□□□ 0.79
PHGDH-223ENST00000641597 HSP90B1P14625 803 aaKnown RBP19.99■□□□□ 0.79
PHGDH-223ENST00000641597 CEBPZQ03701 1054 aaKnown RBP19.99■□□□□ 0.79
PHGDH-223ENST00000641597 PLBD2Q8NHP8 589 aa19.99■□□□□ 0.79
PHGDH-223ENST00000641597 BRF1Q92994 677 aa19.99■□□□□ 0.79
PHGDH-223ENST00000641597 USPL1Q5W0Q7 1092 aa19.98■□□□□ 0.79
PHGDH-223ENST00000641597 HAUS7Q99871 368 aa19.98■□□□□ 0.79
PHGDH-223ENST00000641597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.98■□□□□ 0.79
PHGDH-223ENST00000641597 JCADQ9P266 1359 aa19.98■□□□□ 0.79
PHGDH-223ENST00000641597 KRT85P78386 507 aa19.98■□□□□ 0.79
PHGDH-223ENST00000641597 FTOQ9C0B1 505 aaKnown RBP eCLIP19.98■□□□□ 0.79
PHGDH-223ENST00000641597 HSPA2P54652 639 aa19.97■□□□□ 0.79
PHGDH-223ENST00000641597 SPC24Q8NBT2 197 aa19.97■□□□□ 0.79
PHGDH-223ENST00000641597 DNAJC5Q9H3Z4 198 aa19.97■□□□□ 0.79
PHGDH-223ENST00000641597 DACT1Q9NYF0 836 aa19.97■□□□□ 0.79
PHGDH-223ENST00000641597 KIF1AQ12756 1690 aa19.97■□□□□ 0.79
PHGDH-223ENST00000641597 STRCP1A6NGW2 1772 aa19.97■□□□□ 0.79
PHGDH-223ENST00000641597 GLI3P10071 1580 aa19.97■□□□□ 0.79
PHGDH-223ENST00000641597 MCMDC2Q4G0Z9 681 aa19.96■□□□□ 0.79
PHGDH-223ENST00000641597 KDM4AO75164 1064 aa19.96■□□□□ 0.79
PHGDH-223ENST00000641597 HSP90AB3PQ58FF7 597 aa19.96■□□□□ 0.79
PHGDH-223ENST00000641597 GTF3C6Q969F1 213 aa19.96■□□□□ 0.79
PHGDH-223ENST00000641597 NCOA5Q9HCD5 579 aaKnown RBP19.96■□□□□ 0.79
PHGDH-223ENST00000641597 SCRN1Q12765 414 aa19.95■□□□□ 0.78
PHGDH-223ENST00000641597 TTLL5Q6EMB2 1281 aa19.95■□□□□ 0.78
PHGDH-223ENST00000641597 TOM1L2Q6ZVM7 507 aa19.95■□□□□ 0.78
PHGDH-223ENST00000641597 FAM184AQ8NB25 1140 aa19.95■□□□□ 0.78
PHGDH-223ENST00000641597 H7C1W4 665 aa19.95■□□□□ 0.78
PHGDH-223ENST00000641597 TPM2P07951 284 aa19.95■□□□□ 0.78
PHGDH-223ENST00000641597 CCT2P78371 535 aaKnown RBP19.95■□□□□ 0.78
PHGDH-223ENST00000641597 LUZP1Q86V48 1076 aa19.95■□□□□ 0.78
PHGDH-223ENST00000641597 PGBD1Q96JS3 809 aa19.95■□□□□ 0.78
PHGDH-223ENST00000641597 SPATA32Q96LK8 384 aa19.95■□□□□ 0.78
PHGDH-223ENST00000641597 HMG20BQ9P0W2 317 aa19.95■□□□□ 0.78
PHGDH-223ENST00000641597 NAP1L2Q9ULW6 460 aaPredicted RBP19.95■□□□□ 0.78
PHGDH-223ENST00000641597 APOBRQ0VD83 1088 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms