RNA–Protein interactions for RNA: ENST00000641588.1

CASC19-243, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-243ENST00000641588 CLSTN1O94985 981 aa8.19□□□□□ -1.1
CASC19-243ENST00000641588 ZRANB2O95218 330 aaKnown RBP eCLIP8.19□□□□□ -1.1
CASC19-243ENST00000641588 HMGB1P09429 215 aaKnown RBP8.19□□□□□ -1.1
CASC19-243ENST00000641588 CCDC192P0DO97 292 aa8.19□□□□□ -1.1
CASC19-243ENST00000641588 ACTN2P35609 894 aa8.19□□□□□ -1.1
CASC19-243ENST00000641588 NR6A1Q15406 480 aa8.19□□□□□ -1.1
CASC19-243ENST00000641588 PTPN14Q15678 1187 aa8.19□□□□□ -1.1
CASC19-243ENST00000641588 TPD52L1Q16890 204 aaPredicted RBP8.19□□□□□ -1.1
CASC19-243ENST00000641588 DESI1Q6ICB0 168 aa8.19□□□□□ -1.1
CASC19-243ENST00000641588 BRICD5Q6PL45 260 aa8.19□□□□□ -1.1
CASC19-243ENST00000641588 TMCO3Q6UWJ1 677 aa8.19□□□□□ -1.1
CASC19-243ENST00000641588 STAG1Q8WVM7 1258 aa8.19□□□□□ -1.1
CASC19-243ENST00000641588 L2HGDHQ9H9P8 463 aa8.19□□□□□ -1.1
CASC19-243ENST00000641588 IFT57Q9NWB7 429 aa8.19□□□□□ -1.1
CASC19-243ENST00000641588 MYOM2P54296 1465 aa8.18□□□□□ -1.1
CASC19-243ENST00000641588 NESP48681 1621 aa8.18□□□□□ -1.1
CASC19-243ENST00000641588 EPB41L2O43491 1005 aaKnown RBP8.18□□□□□ -1.1
CASC19-243ENST00000641588 ERCC3P19447 782 aa8.18□□□□□ -1.1
CASC19-243ENST00000641588 MAP2K2P36507 400 aa8.18□□□□□ -1.1
CASC19-243ENST00000641588 PLA2G4AP47712 749 aa8.18□□□□□ -1.1
CASC19-243ENST00000641588 SETQ01105 290 aaPredicted RBP8.18□□□□□ -1.1
CASC19-243ENST00000641588 WASHC4Q2M389 1173 aa8.18□□□□□ -1.1
CASC19-243ENST00000641588 NBPF9Q3BBW0 867 aa8.18□□□□□ -1.1
CASC19-243ENST00000641588 ATF7IPQ6VMQ6 1270 aa8.18□□□□□ -1.1
CASC19-243ENST00000641588 LEKR1Q6ZMV7 388 aa8.18□□□□□ -1.1
CASC19-243ENST00000641588 NYAP1Q6ZVC0 841 aa8.18□□□□□ -1.1
CASC19-243ENST00000641588 NBPF11Q86T75 865 aa8.18□□□□□ -1.1
CASC19-243ENST00000641588 SCUBE3Q8IX30 993 aa8.18□□□□□ -1.1
CASC19-243ENST00000641588 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.18□□□□□ -1.1
CASC19-243ENST00000641588 ANKRD20A12PQ8NF67 263 aa8.18□□□□□ -1.1
CASC19-243ENST00000641588 FAM200AQ8TCP9 573 aa8.18□□□□□ -1.1
CASC19-243ENST00000641588 IL17RAQ96F46 866 aa8.18□□□□□ -1.1
CASC19-243ENST00000641588 USB1Q9BQ65 265 aaKnown RBP8.18□□□□□ -1.1
CASC19-243ENST00000641588 ZNF215Q9UL58 517 aaPredicted RBP8.18□□□□□ -1.1
CASC19-243ENST00000641588 SUFUQ9UMX1 484 aa8.18□□□□□ -1.1
CASC19-243ENST00000641588 NSFL1CQ9UNZ2 370 aaKnown RBP8.18□□□□□ -1.1
CASC19-243ENST00000641588 MAGI2Q86UL8 1455 aa8.17□□□□□ -1.1
CASC19-243ENST00000641588 GOLIM4O00461 696 aa8.17□□□□□ -1.1
CASC19-243ENST00000641588 SGSM2O43147 1006 aa8.17□□□□□ -1.1
CASC19-243ENST00000641588 HCLS1P14317 486 aaPredicted RBP8.17□□□□□ -1.1
CASC19-243ENST00000641588 LIG1P18858 919 aa8.17□□□□□ -1.1
CASC19-243ENST00000641588 KCNJ6P48051 423 aa8.17□□□□□ -1.1
CASC19-243ENST00000641588 VAC14Q08AM6 782 aa8.17□□□□□ -1.1
CASC19-243ENST00000641588 ZKSCAN8Q15776 578 aaPredicted RBP8.17□□□□□ -1.1
CASC19-243ENST00000641588 HDGFL1Q5TGJ6 251 aa8.17□□□□□ -1.1
CASC19-243ENST00000641588 LYPD8Q6UX82 237 aa8.17□□□□□ -1.1
CASC19-243ENST00000641588 EFCAB13Q8IY85 973 aa8.17□□□□□ -1.1
CASC19-243ENST00000641588 CCDC146Q8IYE0 955 aa8.17□□□□□ -1.1
CASC19-243ENST00000641588 ADAMTS19Q8TE59 1207 aa8.17□□□□□ -1.1
CASC19-243ENST00000641588 TBC1D22AQ8WUA7 517 aa8.17□□□□□ -1.1
CASC19-243ENST00000641588 C16orf45Q96MC5 204 aaPredicted RBP8.17□□□□□ -1.1
CASC19-243ENST00000641588 TRERF1Q96PN7 1200 aa8.17□□□□□ -1.1
CASC19-243ENST00000641588 A1CFQ9NQ94 594 aaKnown RBP8.17□□□□□ -1.1
CASC19-243ENST00000641588 PCDHB3Q9Y5E6 796 aa8.17□□□□□ -1.1
CASC19-243ENST00000641588 IL16Q14005 1332 aa8.17□□□□□ -1.1
CASC19-243ENST00000641588 LAMC3Q9Y6N6 1575 aa8.16□□□□□ -1.1
CASC19-243ENST00000641588 TTC36A6NLP5 189 aa8.16□□□□□ -1.1
CASC19-243ENST00000641588 CORO7P57737 925 aa8.16□□□□□ -1.1
CASC19-243ENST00000641588 ANAPC15P60006 121 aa8.16□□□□□ -1.1
CASC19-243ENST00000641588 LRCH2Q5VUJ6 765 aa8.16□□□□□ -1.1
CASC19-243ENST00000641588 JAKMIP3Q5VZ66 844 aa8.16□□□□□ -1.1
CASC19-243ENST00000641588 ZSCAN25Q6NSZ9 544 aa8.16□□□□□ -1.1
CASC19-243ENST00000641588 NBPF10Q6P3W6 841 aaKnown RBP8.16□□□□□ -1.1
CASC19-243ENST00000641588 GPATCH11Q8N954 259 aa8.16□□□□□ -1.1
CASC19-243ENST00000641588 CHMP4CQ96CF2 233 aa8.16□□□□□ -1.1
CASC19-243ENST00000641588 THAP11Q96EK4 314 aa8.16□□□□□ -1.1
CASC19-243ENST00000641588 IQSEC2Q5JU85 1478 aa8.16□□□□□ -1.1
CASC19-243ENST00000641588 SHANK2Q9UPX8 1470 aa8.16□□□□□ -1.1
CASC19-243ENST00000641588 ABCC11Q96J66 1382 aa8.16□□□□□ -1.1
CASC19-243ENST00000641588 PDS5BQ9NTI5 1447 aa8.15□□□□□ -1.1
CASC19-243ENST00000641588 CCP110O43303 1012 aa8.15□□□□□ -1.1
CASC19-243ENST00000641588 NR1I2O75469 434 aa8.15□□□□□ -1.1
CASC19-243ENST00000641588 PTGS1P23219 599 aa8.15□□□□□ -1.1
CASC19-243ENST00000641588 SRPK2P78362 688 aaKnown RBP8.15□□□□□ -1.1
CASC19-243ENST00000641588 PKP1Q13835 747 aa8.15□□□□□ -1.1
CASC19-243ENST00000641588 ELF2Q15723 593 aa8.15□□□□□ -1.1
CASC19-243ENST00000641588 C11orf91Q3C1V1 193 aa8.15□□□□□ -1.1
CASC19-243ENST00000641588 ALDH1L2Q3SY69 923 aa8.15□□□□□ -1.1
CASC19-243ENST00000641588 USP48Q86UV5 1035 aa8.15□□□□□ -1.1
CASC19-243ENST00000641588 ITPRIPQ8IWB1 547 aa8.15□□□□□ -1.1
CASC19-243ENST00000641588 JMYQ8N9B5 988 aa8.15□□□□□ -1.1
CASC19-243ENST00000641588 NFATC2IPQ8NCF5 419 aa8.15□□□□□ -1.1
CASC19-243ENST00000641588 DRC1Q96MC2 740 aa8.15□□□□□ -1.1
CASC19-243ENST00000641588 LNPKQ9C0E8 428 aa8.15□□□□□ -1.1
CASC19-243ENST00000641588 WBP1LQ9NX94 342 aa8.15□□□□□ -1.1
CASC19-243ENST00000641588 NUP155O75694 1391 aa8.15□□□□□ -1.11
CASC19-243ENST00000641588 A0A087WUV0 522 aaPredicted RBP8.14□□□□□ -1.11
CASC19-243ENST00000641588 CCDC189A1A4V9 331 aa8.14□□□□□ -1.11
CASC19-243ENST00000641588 C21orf2O43822 256 aa8.14□□□□□ -1.11
CASC19-243ENST00000641588 FMNL1O95466 1100 aaPredicted RBP8.14□□□□□ -1.11
CASC19-243ENST00000641588 EIF5P55010 431 aaKnown RBP8.14□□□□□ -1.11
CASC19-243ENST00000641588 TUBB4BP68371 445 aa8.14□□□□□ -1.11
CASC19-243ENST00000641588 CCDC186Q7Z3E2 898 aa8.14□□□□□ -1.11
CASC19-243ENST00000641588 PLA2G4DQ86XP0 818 aa8.14□□□□□ -1.11
CASC19-243ENST00000641588 ERC1Q8IUD2 1116 aa8.14□□□□□ -1.11
CASC19-243ENST00000641588 ZGPATQ8N5A5 531 aaKnown RBP8.14□□□□□ -1.11
CASC19-243ENST00000641588 NEK11Q8NG66 645 aa8.14□□□□□ -1.11
CASC19-243ENST00000641588 ZBTB9Q96C00 473 aa8.14□□□□□ -1.11
CASC19-243ENST00000641588 FAM210AQ96ND0 272 aa8.14□□□□□ -1.11
CASC19-243ENST00000641588 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms