RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 NBR1Q14596 966 aa10.82□□□□□ -0.68
PHGDH-219ENST00000641513 PARP10Q53GL7 1025 aa10.82□□□□□ -0.68
PHGDH-219ENST00000641513 SUSD4Q5VX71 490 aa10.82□□□□□ -0.68
PHGDH-219ENST00000641513 BICDL1Q6ZP65 573 aa10.82□□□□□ -0.68
PHGDH-219ENST00000641513 TBC1D9Q6ZT07 1266 aa10.82□□□□□ -0.68
PHGDH-219ENST00000641513 CCDC8Q9H0W5 538 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-219ENST00000641513 STAP2Q9UGK3 403 aa10.82□□□□□ -0.68
PHGDH-219ENST00000641513 SH3TC1Q8TE82 1336 aa10.82□□□□□ -0.68
PHGDH-219ENST00000641513 SALL3Q9BXA9 1300 aa10.82□□□□□ -0.68
PHGDH-219ENST00000641513 ERC2O15083 957 aa10.81□□□□□ -0.68
PHGDH-219ENST00000641513 PDE8AO60658 829 aa10.81□□□□□ -0.68
PHGDH-219ENST00000641513 MAP4K4O95819 1239 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-219ENST00000641513 GTF2E1P29083 439 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-219ENST00000641513 RFC4P35249 363 aa10.81□□□□□ -0.68
PHGDH-219ENST00000641513 CTSWP56202 376 aa10.81□□□□□ -0.68
PHGDH-219ENST00000641513 TFCP2Q12800 502 aa10.81□□□□□ -0.68
PHGDH-219ENST00000641513 USPL1Q5W0Q7 1092 aa10.81□□□□□ -0.68
PHGDH-219ENST00000641513 PLA2G12BQ9BX93 195 aa10.81□□□□□ -0.68
PHGDH-219ENST00000641513 SRP68Q9UHB9 627 aaKnown RBP10.81□□□□□ -0.68
PHGDH-219ENST00000641513 TTC41PQ6P2S7 1318 aa10.81□□□□□ -0.68
PHGDH-219ENST00000641513 COL24A1Q17RW2 1714 aa10.81□□□□□ -0.68
PHGDH-219ENST00000641513 TNS1Q9HBL0 1735 aaKnown RBP10.81□□□□□ -0.68
PHGDH-219ENST00000641513 ANKRD18BA2A2Z9 1011 aa10.8□□□□□ -0.68
PHGDH-219ENST00000641513 HCLS1P14317 486 aaPredicted RBP10.8□□□□□ -0.68
PHGDH-219ENST00000641513 HSP90B1P14625 803 aaKnown RBP10.8□□□□□ -0.68
PHGDH-219ENST00000641513 IL15P40933 162 aaPredicted RBP10.8□□□□□ -0.68
PHGDH-219ENST00000641513 TRAPPC3LQ5T215 181 aa10.8□□□□□ -0.68
PHGDH-219ENST00000641513 CLEC4GQ6UXB4 293 aa10.8□□□□□ -0.68
PHGDH-219ENST00000641513 EAF2Q96CJ1 260 aaPredicted RBP10.8□□□□□ -0.68
PHGDH-219ENST00000641513 ECHDC1Q9NTX5 307 aa10.8□□□□□ -0.68
PHGDH-219ENST00000641513 NARFQ9UHQ1 456 aa10.8□□□□□ -0.68
PHGDH-219ENST00000641513 SRCAPQ6ZRS2 3230 aa10.79□□□□□ -0.68
PHGDH-219ENST00000641513 EYA2O00167 538 aa10.79□□□□□ -0.68
PHGDH-219ENST00000641513 NPHP1O15259 732 aa10.79□□□□□ -0.68
PHGDH-219ENST00000641513 GLRX3O76003 335 aaKnown RBP10.79□□□□□ -0.68
PHGDH-219ENST00000641513 CSF1RP07333 972 aa10.79□□□□□ -0.68
PHGDH-219ENST00000641513 ITGA6P23229 1130 aa10.79□□□□□ -0.68
PHGDH-219ENST00000641513 LRRC24Q50LG9 513 aa10.79□□□□□ -0.68
PHGDH-219ENST00000641513 TNNI3KQ59H18 835 aa10.79□□□□□ -0.68
PHGDH-219ENST00000641513 SLC27A3Q5K4L6 730 aa10.79□□□□□ -0.68
PHGDH-219ENST00000641513 CNTROBQ8N137 903 aa10.79□□□□□ -0.68
PHGDH-219ENST00000641513 TTLL11Q8NHH1 800 aa10.79□□□□□ -0.68
PHGDH-219ENST00000641513 ARHGEF1Q92888 912 aaKnown RBP10.79□□□□□ -0.68
PHGDH-219ENST00000641513 NEUROD6Q96NK8 337 aa10.79□□□□□ -0.68
PHGDH-219ENST00000641513 C22orf23Q9BZE7 217 aa10.79□□□□□ -0.68
PHGDH-219ENST00000641513 GREM2Q9H772 168 aa10.79□□□□□ -0.68
PHGDH-219ENST00000641513 LRRC4BQ9NT99 713 aa10.79□□□□□ -0.68
PHGDH-219ENST00000641513 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.79□□□□□ -0.68
PHGDH-219ENST00000641513 FPGT-TNNI3KV9GXZ4 949 aa10.79□□□□□ -0.68
PHGDH-219ENST00000641513 MYH7P12883 1935 aa10.79□□□□□ -0.68
PHGDH-219ENST00000641513 CIAO1O76071 339 aa10.78□□□□□ -0.68
PHGDH-219ENST00000641513 NTSR2O95665 410 aa10.78□□□□□ -0.68
PHGDH-219ENST00000641513 APBA3O96018 575 aa10.78□□□□□ -0.68
PHGDH-219ENST00000641513 NFKBIBQ15653 356 aa10.78□□□□□ -0.68
PHGDH-219ENST00000641513 TBC1D9BQ66K14 1250 aa10.78□□□□□ -0.68
PHGDH-219ENST00000641513 PI4K2BQ8TCG2 481 aa10.78□□□□□ -0.68
PHGDH-219ENST00000641513 SETDB2Q96T68 719 aa10.78□□□□□ -0.68
PHGDH-219ENST00000641513 PUS3Q9BZE2 481 aaKnown RBP10.78□□□□□ -0.68
PHGDH-219ENST00000641513 CNNM1Q9NRU3 951 aa10.78□□□□□ -0.68
PHGDH-219ENST00000641513 TLR7Q9NYK1 1049 aaKnown RBP10.78□□□□□ -0.68
PHGDH-219ENST00000641513 CEP126Q9P2H0 1117 aa10.78□□□□□ -0.68
PHGDH-219ENST00000641513 USP42Q9H9J4 1324 aaKnown RBP10.78□□□□□ -0.68
PHGDH-219ENST00000641513 A0A1B0GUL6 1792 aa10.77□□□□□ -0.68
PHGDH-219ENST00000641513 HMGB2P26583 209 aaKnown RBP10.77□□□□□ -0.69
PHGDH-219ENST00000641513 RBM25P49756 843 aaKnown RBP10.77□□□□□ -0.69
PHGDH-219ENST00000641513 TXNRD1Q16881 649 aa10.77□□□□□ -0.69
PHGDH-219ENST00000641513 ERFEQ4G0M1 354 aa10.77□□□□□ -0.69
PHGDH-219ENST00000641513 CCDC152Q4G0S7 254 aa10.77□□□□□ -0.69
PHGDH-219ENST00000641513 METTL24Q5JXM2 366 aa10.77□□□□□ -0.69
PHGDH-219ENST00000641513 POTEAQ6S8J7 498 aa10.77□□□□□ -0.69
PHGDH-219ENST00000641513 LDHAL6AQ6ZMR3 332 aa10.77□□□□□ -0.69
PHGDH-219ENST00000641513 ATG9AQ7Z3C6 839 aa10.77□□□□□ -0.69
PHGDH-219ENST00000641513 NYXQ9GZU5 481 aa10.77□□□□□ -0.69
PHGDH-219ENST00000641513 ZNF609O15014 1411 aa10.76□□□□□ -0.69
PHGDH-219ENST00000641513 ARAP2Q8WZ64 1704 aa10.76□□□□□ -0.69
PHGDH-219ENST00000641513 RGPD3A6NKT7 1758 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-219ENST00000641513 RGPD4Q7Z3J3 1758 aa10.76□□□□□ -0.69
PHGDH-219ENST00000641513 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.76□□□□□ -0.69
PHGDH-219ENST00000641513 DCAF8L1A6NGE4 600 aa10.76□□□□□ -0.69
PHGDH-219ENST00000641513 GORABQ5T7V8 394 aa10.76□□□□□ -0.69
PHGDH-219ENST00000641513 AMIGO3Q86WK7 504 aa10.76□□□□□ -0.69
PHGDH-219ENST00000641513 NBPF5PQ86XG9 351 aaPredicted RBP10.76□□□□□ -0.69
PHGDH-219ENST00000641513 DBNDD2Q9BQY9 259 aa10.76□□□□□ -0.69
PHGDH-219ENST00000641513 BOLA2Q9H3K6 86 aa10.76□□□□□ -0.69
PHGDH-219ENST00000641513 BCL2L12Q9HB09 334 aa10.76□□□□□ -0.69
PHGDH-219ENST00000641513 FBXO3Q9UK99 471 aa10.76□□□□□ -0.69
PHGDH-219ENST00000641513 AKAP2Q9Y2D5 859 aa10.76□□□□□ -0.69
PHGDH-219ENST00000641513 MYH13Q9UKX3 1938 aa10.76□□□□□ -0.69
PHGDH-219ENST00000641513 MYO5AQ9Y4I1 1855 aaKnown RBP10.75□□□□□ -0.69
PHGDH-219ENST00000641513 RGL2O15211 777 aa10.75□□□□□ -0.69
PHGDH-219ENST00000641513 REC8O95072 547 aa10.75□□□□□ -0.69
PHGDH-219ENST00000641513 TIMM10P62072 90 aa10.75□□□□□ -0.69
PHGDH-219ENST00000641513 MPHOSPH8Q99549 860 aa10.75□□□□□ -0.69
PHGDH-219ENST00000641513 ANTXR1Q9H6X2 564 aa10.75□□□□□ -0.69
PHGDH-219ENST00000641513 RGS17Q9UGC6 210 aaPredicted RBP10.75□□□□□ -0.69
PHGDH-219ENST00000641513 DBNLQ9UJU6 430 aaKnown RBP10.75□□□□□ -0.69
PHGDH-219ENST00000641513 A0A1B0GUL7 405 aa10.74□□□□□ -0.69
PHGDH-219ENST00000641513 CHMLP26374 656 aa10.74□□□□□ -0.69
PHGDH-219ENST00000641513 IGHMBP2P38935 993 aaKnown RBP10.74□□□□□ -0.69
PHGDH-219ENST00000641513 TPTE2Q6XPS3 522 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms