RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 RAB11FIP3O75154 756 aa24.57■■□□□ 1.52
PHGDH-210ENST00000641115 RFX5P48382 616 aaPredicted RBP24.57■■□□□ 1.52
PHGDH-210ENST00000641115 OS9Q13438 667 aaPredicted RBP24.57■■□□□ 1.52
PHGDH-210ENST00000641115 SLC10A5Q5PT55 438 aa24.57■■□□□ 1.52
PHGDH-210ENST00000641115 CHD1LQ86WJ1 897 aa24.57■■□□□ 1.52
PHGDH-210ENST00000641115 PA2G4Q9UQ80 394 aaKnown RBP24.57■■□□□ 1.52
PHGDH-210ENST00000641115 SERPINB2P05120 415 aa24.56■■□□□ 1.52
PHGDH-210ENST00000641115 IFIT5Q13325 482 aaKnown RBP24.56■■□□□ 1.52
PHGDH-210ENST00000641115 CCDC85AQ96PX6 553 aaPredicted RBP24.56■■□□□ 1.52
PHGDH-210ENST00000641115 COPRSQ9NQ92 184 aa24.56■■□□□ 1.52
PHGDH-210ENST00000641115 POLRMTO00411 1230 aaKnown RBP24.55■■□□□ 1.52
PHGDH-210ENST00000641115 DDR1Q08345 913 aa24.55■■□□□ 1.52
PHGDH-210ENST00000641115 LRRCC1Q9C099 1032 aa24.55■■□□□ 1.52
PHGDH-210ENST00000641115 NRXN2Q9P2S2 1712 aa24.55■■□□□ 1.52
PHGDH-210ENST00000641115 ST5P78524 1137 aa24.54■■□□□ 1.52
PHGDH-210ENST00000641115 PTPN12Q05209 780 aaKnown RBP24.54■■□□□ 1.52
PHGDH-210ENST00000641115 G3BP1Q13283 466 aaKnown RBP eCLIP24.54■■□□□ 1.529e-7■■■□□ 18.4
PHGDH-210ENST00000641115 CCDC152Q4G0S7 254 aa24.54■■□□□ 1.52
PHGDH-210ENST00000641115 ERC1Q8IUD2 1116 aa24.54■■□□□ 1.52
PHGDH-210ENST00000641115 KLHDC4Q8TBB5 520 aa24.54■■□□□ 1.52
PHGDH-210ENST00000641115 LNPKQ9C0E8 428 aa24.54■■□□□ 1.52
PHGDH-210ENST00000641115 GREM2Q9H772 168 aa24.54■■□□□ 1.52
PHGDH-210ENST00000641115 TAF7LQ5H9L4 462 aa24.53■■□□□ 1.52
PHGDH-210ENST00000641115 MSL1Q68DK7 614 aa24.53■■□□□ 1.52
PHGDH-210ENST00000641115 PRR5LQ6MZQ0 368 aa24.53■■□□□ 1.52
PHGDH-210ENST00000641115 SIL1Q9H173 461 aa24.53■■□□□ 1.52
PHGDH-210ENST00000641115 TNRC6CQ9HCJ0 1690 aaKnown RBP24.53■■□□□ 1.52
PHGDH-210ENST00000641115 RIC1Q4ADV7 1423 aa24.53■■□□□ 1.52
PHGDH-210ENST00000641115 ANKRD18BA2A2Z9 1011 aa24.53■■□□□ 1.52
PHGDH-210ENST00000641115 ITGA6P23229 1130 aa24.53■■□□□ 1.52
PHGDH-210ENST00000641115 KIF1BPQ96EK5 621 aa24.53■■□□□ 1.52
PHGDH-210ENST00000641115 NLRP3Q96P20 1036 aa24.53■■□□□ 1.52
PHGDH-210ENST00000641115 MMP10P09238 476 aa24.52■■□□□ 1.52
PHGDH-210ENST00000641115 PELP1Q8IZL8 1130 aaKnown RBP24.52■■□□□ 1.52
PHGDH-210ENST00000641115 PARP3Q9Y6F1 533 aa24.52■■□□□ 1.52
PHGDH-210ENST00000641115 RTL9Q8NET4 1388 aa24.52■■□□□ 1.52
PHGDH-210ENST00000641115 SKAP1Q86WV1 359 aa24.51■■□□□ 1.51
PHGDH-210ENST00000641115 RGS3P49796 1198 aa24.5■■□□□ 1.51
PHGDH-210ENST00000641115 SF3B3Q15393 1217 aaKnown RBP24.5■■□□□ 1.51
PHGDH-210ENST00000641115 CCDC24Q8N4L8 307 aa24.5■■□□□ 1.51
PHGDH-210ENST00000641115 RHPN1Q8TCX5 695 aa24.5■■□□□ 1.51
PHGDH-210ENST00000641115 SLC16A10Q8TF71 515 aa24.5■■□□□ 1.51
PHGDH-210ENST00000641115 SPEF2Q9C093 1822 aa24.49■■□□□ 1.51
PHGDH-210ENST00000641115 SMARCA5O60264 1052 aaPredicted RBP24.49■■□□□ 1.51
PHGDH-210ENST00000641115 ZNF594Q96JF6 807 aaPredicted RBP24.49■■□□□ 1.51
PHGDH-210ENST00000641115 BCL11AQ9H165 835 aa24.49■■□□□ 1.51
PHGDH-210ENST00000641115 FBXO3Q9UK99 471 aa24.49■■□□□ 1.51
PHGDH-210ENST00000641115 LRP5O75197 1615 aa24.48■■□□□ 1.51
PHGDH-210ENST00000641115 CIAO1O76071 339 aa24.47■■□□□ 1.51
PHGDH-210ENST00000641115 C3orf67Q6ZVT6 689 aa24.47■■□□□ 1.51
PHGDH-210ENST00000641115 PDGFDQ9GZP0 370 aaPredicted RBP24.47■■□□□ 1.51
PHGDH-210ENST00000641115 EYA2O00167 538 aa24.46■■□□□ 1.51
PHGDH-210ENST00000641115 ANKRD31Q8N7Z5 1873 aa24.46■■□□□ 1.51
PHGDH-210ENST00000641115 PDE4AP27815 886 aa24.46■■□□□ 1.51
PHGDH-210ENST00000641115 IL15P40933 162 aaPredicted RBP24.46■■□□□ 1.51
PHGDH-210ENST00000641115 CDC5LQ99459 802 aaKnown RBP24.46■■□□□ 1.51
PHGDH-210ENST00000641115 IL1RAPL2Q9NP60 686 aa24.46■■□□□ 1.51
PHGDH-210ENST00000641115 SASH1O94885 1247 aa24.45■■□□□ 1.5
PHGDH-210ENST00000641115 LDHAL6AQ6ZMR3 332 aa24.45■■□□□ 1.5
PHGDH-210ENST00000641115 CLASRPQ8N2M8 674 aaKnown RBP24.45■■□□□ 1.5
PHGDH-210ENST00000641115 IGHMBP2P38935 993 aaKnown RBP24.44■■□□□ 1.5
PHGDH-210ENST00000641115 SEC31BQ9NQW1 1179 aa24.44■■□□□ 1.5
PHGDH-210ENST00000641115 LRRC24Q50LG9 513 aa24.43■■□□□ 1.5
PHGDH-210ENST00000641115 ATG9AQ7Z3C6 839 aa24.43■■□□□ 1.5
PHGDH-210ENST00000641115 MPHOSPH8Q99549 860 aa24.43■■□□□ 1.5
PHGDH-210ENST00000641115 TAF1P21675 1872 aa24.43■■□□□ 1.5
PHGDH-210ENST00000641115 R3HDM1Q15032 1099 aaKnown RBP24.43■■□□□ 1.5
PHGDH-210ENST00000641115 PUS3Q9BZE2 481 aaKnown RBP24.43■■□□□ 1.5
PHGDH-210ENST00000641115 CNNM1Q9NRU3 951 aa24.43■■□□□ 1.5
PHGDH-210ENST00000641115 DDX46Q7L014 1031 aaKnown RBP24.42■■□□□ 1.5
PHGDH-210ENST00000641115 ANKRD18AQ8IVF6 992 aa24.42■■□□□ 1.5
PHGDH-210ENST00000641115 BRIP1Q9BX63 1249 aa24.42■■□□□ 1.5
PHGDH-210ENST00000641115 TFCP2Q12800 502 aa24.41■■□□□ 1.5
PHGDH-210ENST00000641115 C16orf71Q8IYS4 520 aaPredicted RBP24.41■■□□□ 1.5
PHGDH-210ENST00000641115 RPGRQ92834 1020 aaKnown RBP24.41■■□□□ 1.5
PHGDH-210ENST00000641115 CRY2Q49AN0 593 aa24.4■■□□□ 1.5
PHGDH-210ENST00000641115 CEP126Q9P2H0 1117 aa24.39■■□□□ 1.5
PHGDH-210ENST00000641115 PDE6BP35913 854 aa24.39■■□□□ 1.49
PHGDH-210ENST00000641115 RIPOR2Q9Y4F9 1068 aa24.39■■□□□ 1.49
PHGDH-210ENST00000641115 COL4A1P02462 1669 aa24.39■■□□□ 1.49
PHGDH-210ENST00000641115 MROH5Q6ZUA9 1318 aa24.38■■□□□ 1.49
PHGDH-210ENST00000641115 IFIT2P09913 472 aaKnown RBP24.38■■□□□ 1.49
PHGDH-210ENST00000641115 METTL24Q5JXM2 366 aa24.38■■□□□ 1.49
PHGDH-210ENST00000641115 AACSQ86V21 672 aa24.38■■□□□ 1.49
PHGDH-210ENST00000641115 PLEKHM2Q8IWE5 1019 aa24.38■■□□□ 1.49
PHGDH-210ENST00000641115 MTFR1LQ9H019 292 aa24.38■■□□□ 1.49
PHGDH-210ENST00000641115 KLRG2A4D1S0 409 aaPredicted RBP24.37■■□□□ 1.49
PHGDH-210ENST00000641115 MX1P20591 662 aa24.37■■□□□ 1.49
PHGDH-210ENST00000641115 OTUD7AQ8TE49 926 aaPredicted RBP24.37■■□□□ 1.49
PHGDH-210ENST00000641115 A0A1B0GUL6 1792 aa24.36■■□□□ 1.49
PHGDH-210ENST00000641115 COL11A2P13942 1736 aaPredicted RBP24.36■■□□□ 1.49
PHGDH-210ENST00000641115 ZBTB7AO95365 584 aa24.36■■□□□ 1.49
PHGDH-210ENST00000641115 TNNI3KQ59H18 835 aa24.36■■□□□ 1.49
PHGDH-210ENST00000641115 CELF1Q92879 486 aaKnown RBP24.36■■□□□ 1.49
PHGDH-210ENST00000641115 RBM17Q96I25 401 aaKnown RBP24.36■■□□□ 1.49
PHGDH-210ENST00000641115 GPR108Q9NPR9 543 aa24.36■■□□□ 1.49
PHGDH-210ENST00000641115 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.36■■□□□ 1.49
PHGDH-210ENST00000641115 FPGT-TNNI3KV9GXZ4 949 aa24.36■■□□□ 1.49
PHGDH-210ENST00000641115 RPS8P62241 208 aaKnown RBP24.35■■□□□ 1.49
PHGDH-210ENST00000641115 EAF2Q96CJ1 260 aaPredicted RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms