RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 PAK3O75914 559 aaPredicted RBP8.32□□□□□ -1.08
RTTN-215ENST00000639487 ARID4AP29374 1257 aaPredicted RBP8.32□□□□□ -1.08
RTTN-215ENST00000639487 BSDC1Q9NW68 430 aaPredicted RBP8.32□□□□□ -1.08
RTTN-215ENST00000639487 PAXIP1Q6ZW49 1069 aaPredicted RBP8.32□□□□□ -1.08
RTTN-215ENST00000639487 RTKN2Q8IZC4 609 aa8.32□□□□□ -1.08
RTTN-215ENST00000639487 MASTLQ96GX5 879 aa8.32□□□□□ -1.08
RTTN-215ENST00000639487 MORC2Q9Y6X9 1032 aaPredicted RBP8.32□□□□□ -1.08
RTTN-215ENST00000639487 IPO8O15397 1037 aaKnown RBP8.31□□□□□ -1.08
RTTN-215ENST00000639487 GRIN3BO60391 1043 aa8.31□□□□□ -1.08
RTTN-215ENST00000639487 SRGNP10124 158 aa8.31□□□□□ -1.08
RTTN-215ENST00000639487 ALDH1B1P30837 517 aa8.31□□□□□ -1.08
RTTN-215ENST00000639487 PRIM1P49642 420 aaKnown RBP8.31□□□□□ -1.08
RTTN-215ENST00000639487 ZC3H15Q8WU90 426 aaKnown RBP8.31□□□□□ -1.08
RTTN-215ENST00000639487 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.31□□□□□ -1.08
RTTN-215ENST00000639487 WDR81Q562E7 1941 aa8.31□□□□□ -1.08
RTTN-215ENST00000639487 RPAP2Q8IXW5 612 aaPredicted RBP8.31□□□□□ -1.08
RTTN-215ENST00000639487 KCNB2Q92953 911 aa8.31□□□□□ -1.08
RTTN-215ENST00000639487 SLC45A1Q9Y2W3 748 aa8.31□□□□□ -1.08
RTTN-215ENST00000639487 PDE8AO60658 829 aa8.3□□□□□ -1.08
RTTN-215ENST00000639487 CNKSR1Q969H4 720 aa8.3□□□□□ -1.08
RTTN-215ENST00000639487 ATP6V0A2Q9Y487 856 aa8.3□□□□□ -1.08
RTTN-215ENST00000639487 WDR19Q8NEZ3 1342 aa8.3□□□□□ -1.08
RTTN-215ENST00000639487 FSTL1Q12841 308 aa8.3□□□□□ -1.08
RTTN-215ENST00000639487 SAFB2Q14151 953 aaKnown RBP eCLIP8.3□□□□□ -1.08
RTTN-215ENST00000639487 TRAPPC3LQ5T215 181 aa8.3□□□□□ -1.08
RTTN-215ENST00000639487 ARHGEF1Q92888 912 aaKnown RBP8.3□□□□□ -1.08
RTTN-215ENST00000639487 DDR1Q08345 913 aa8.3□□□□□ -1.08
RTTN-215ENST00000639487 ANKRD44Q8N8A2 993 aa8.3□□□□□ -1.08
RTTN-215ENST00000639487 DPF2Q92785 391 aa8.3□□□□□ -1.08
RTTN-215ENST00000639487 GMLQ99445 158 aa8.3□□□□□ -1.08
RTTN-215ENST00000639487 ANKRD2Q9GZV1 360 aa8.3□□□□□ -1.08
RTTN-215ENST00000639487 GAKO14976 1311 aa8.3□□□□□ -1.08
RTTN-215ENST00000639487 FKBP4Q02790 459 aaKnown RBP eCLIP8.29□□□□□ -1.08
RTTN-215ENST00000639487 GRAPQ13588 217 aa8.29□□□□□ -1.08
RTTN-215ENST00000639487 GRAPLQ8TC17 118 aaPredicted RBP8.29□□□□□ -1.08
RTTN-215ENST00000639487 FGRP09769 529 aa8.29□□□□□ -1.08
RTTN-215ENST00000639487 FKBP1BP68106 108 aa8.29□□□□□ -1.08
RTTN-215ENST00000639487 RALGAPA2Q2PPJ7 1873 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 ARID2Q68CP9 1835 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 IGHA2P01877 340 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 U2AF1L5P0DN76 240 aaPredicted RBP8.28□□□□□ -1.08
RTTN-215ENST00000639487 U2AF1Q01081 240 aaKnown RBP eCLIP8.28□□□□□ -1.08
RTTN-215ENST00000639487 TEFQ10587 303 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 NFATC2IPQ8NCF5 419 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 SPON1Q9HCB6 807 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 TSHZ2Q9NRE2 1034 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 ASAP1Q9ULH1 1129 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 PASKQ96RG2 1323 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 LOC102724159A0A0B4J2E5 919 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 IGKV5-2P06315 115 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 NKX3-2P78367 333 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 GCKRQ14397 625 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 PWP2Q15269 919 aaKnown RBP8.28□□□□□ -1.08
RTTN-215ENST00000639487 ALDH8A1Q9H2A2 487 aaPredicted RBP8.28□□□□□ -1.08
RTTN-215ENST00000639487 TBC1D12O60347 775 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 GHRHRQ02643 423 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 UBE4AQ14139 1066 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 EZH2Q15910 746 aaKnown RBP8.28□□□□□ -1.08
RTTN-215ENST00000639487 NOL9Q5SY16 702 aaKnown RBP8.28□□□□□ -1.08
RTTN-215ENST00000639487 GIMAP6Q6P9H5 292 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 ZBTB40Q9NUA8 1239 aa8.28□□□□□ -1.08
RTTN-215ENST00000639487 TTC41PQ6P2S7 1318 aa8.27□□□□□ -1.09
RTTN-215ENST00000639487 TESPA1A2RU30 521 aaPredicted RBP8.27□□□□□ -1.09
RTTN-215ENST00000639487 GNAI3P08754 354 aa8.27□□□□□ -1.09
RTTN-215ENST00000639487 RBM10P98175 930 aaKnown RBP8.27□□□□□ -1.09
RTTN-215ENST00000639487 TWISTNBQ3B726 338 aaPredicted RBP8.27□□□□□ -1.09
RTTN-215ENST00000639487 TTC5Q8N0Z6 440 aa8.27□□□□□ -1.09
RTTN-215ENST00000639487 KIAA1217Q5T5P2 1943 aa8.27□□□□□ -1.09
RTTN-215ENST00000639487 ZBTB7BO15156 539 aaPredicted RBP8.27□□□□□ -1.09
RTTN-215ENST00000639487 PCP11498 1178 aaKnown RBP8.27□□□□□ -1.09
RTTN-215ENST00000639487 DEKP35659 375 aaKnown RBP8.27□□□□□ -1.09
RTTN-215ENST00000639487 PRR5LQ6MZQ0 368 aa8.27□□□□□ -1.09
RTTN-215ENST00000639487 AGBL3Q8NEM8 1001 aa8.27□□□□□ -1.09
RTTN-215ENST00000639487 SF3B2Q13435 895 aaKnown RBP8.26□□□□□ -1.09
RTTN-215ENST00000639487 ATP2B4P23634 1241 aa8.26□□□□□ -1.09
RTTN-215ENST00000639487 CC2D1BQ5T0F9 858 aaKnown RBP8.26□□□□□ -1.09
RTTN-215ENST00000639487 KIF6Q6ZMV9 814 aa8.26□□□□□ -1.09
RTTN-215ENST00000639487 ERC1Q8IUD2 1116 aa8.26□□□□□ -1.09
RTTN-215ENST00000639487 RBM46Q8TBY0 533 aaKnown RBP8.26□□□□□ -1.09
RTTN-215ENST00000639487 RBM17Q96I25 401 aaKnown RBP8.26□□□□□ -1.09
RTTN-215ENST00000639487 KAZALD1Q96I82 304 aa8.26□□□□□ -1.09
RTTN-215ENST00000639487 ADAMTS2O95450 1211 aa8.26□□□□□ -1.09
RTTN-215ENST00000639487 XPCQ01831 940 aaPredicted RBP8.26□□□□□ -1.09
RTTN-215ENST00000639487 ATF7IPQ6VMQ6 1270 aa8.26□□□□□ -1.09
RTTN-215ENST00000639487 HSP90AB4PQ58FF6 505 aa8.25□□□□□ -1.09
RTTN-215ENST00000639487 FBXO33Q7Z6M2 555 aa8.25□□□□□ -1.09
RTTN-215ENST00000639487 SMC5Q8IY18 1101 aa8.25□□□□□ -1.09
RTTN-215ENST00000639487 SAMD3Q8N6K7 520 aa8.25□□□□□ -1.09
RTTN-215ENST00000639487 DNAAF4Q8WXU2 420 aa8.25□□□□□ -1.09
RTTN-215ENST00000639487 RBM33Q96EV2 1170 aaKnown RBP8.25□□□□□ -1.09
RTTN-215ENST00000639487 TSPYL4Q9UJ04 414 aa8.25□□□□□ -1.09
RTTN-215ENST00000639487 RIPOR2Q9Y4F9 1068 aa8.25□□□□□ -1.09
RTTN-215ENST00000639487 SH3TC1Q8TE82 1336 aa8.25□□□□□ -1.09
RTTN-215ENST00000639487 RAD50Q92878 1312 aa8.25□□□□□ -1.09
RTTN-215ENST00000639487 APBA3O96018 575 aa8.25□□□□□ -1.09
RTTN-215ENST00000639487 RCAN1P53805 252 aa8.25□□□□□ -1.09
RTTN-215ENST00000639487 FLIIQ13045 1269 aa8.25□□□□□ -1.09
RTTN-215ENST00000639487 CWC25Q9NXE8 425 aaPredicted RBP8.25□□□□□ -1.09
RTTN-215ENST00000639487 MYPNQ86TC9 1320 aa8.25□□□□□ -1.09
RTTN-215ENST00000639487 CTSWP56202 376 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms