RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 PHAXQ9H814 394 aaKnown RBP12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 IL1RAPL2Q9NP60 686 aa12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 CETN3O15182 167 aa12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 AKR1B10O60218 316 aa12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 SMARCA5O60264 1052 aaPredicted RBP12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 CTNNA2P26232 953 aa12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 LRRC23Q53EV4 343 aaPredicted RBP12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 SNX21Q969T3 373 aa12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 CABS1Q96KC9 395 aa12.43□□□□□ -0.42
KCNMA1-259ENST00000639406 LIG3P49916 1009 aa12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 TRIM68Q6AZZ1 485 aa12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 CCDC110Q8TBZ0 833 aa12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 TACO1Q9BSH4 297 aaKnown RBP12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 NACAP1Q9BZK3 213 aa12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 DHX29Q7Z478 1369 aaKnown RBP12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 HNRNPMP52272 730 aaKnown RBP eCLIP12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 WWC2Q6AWC2 1192 aa12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 LUC7L3O95232 432 aaKnown RBP12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 MIER3Q7Z3K6 550 aa12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 DDX54Q8TDD1 881 aaKnown RBP12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 TSC1Q92574 1164 aa12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 AQRO60306 1485 aaKnown RBP eCLIP12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 ERCC3P19447 782 aa12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 RAB11FIP4Q86YS3 637 aa12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 CNPY4Q8N129 248 aa12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 TMX3Q96JJ7 454 aa12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 RRP15Q9Y3B9 282 aaKnown RBP12.42□□□□□ -0.42
KCNMA1-259ENST00000639406 RAB11FIP3O75154 756 aa12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 GIGYF1O75420 1035 aaPredicted RBP12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 ALDH3A1P30838 453 aa12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 MORC4Q8TE76 937 aa12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 UBLCP1Q8WVY7 318 aaPredicted RBP12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 SCAPERQ9BY12 1400 aa12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 TLDC2A0PJX2 215 aa12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 KRT83P78385 493 aa12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 SNCBQ16143 134 aa12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 SREK1Q8WXA9 508 aaKnown RBP12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 KRT86O43790 486 aa12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 C8orf34Q49A92 452 aa12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 PHLDB2Q86SQ0 1253 aa12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 CARD6Q9BX69 1037 aa12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 CCDC196A0A1B0GTZ2 297 aa12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 CCDC40Q4G0X9 1142 aa12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 CCDC102BQ68D86 513 aa12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 GUCA1BQ9UMX6 200 aa12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 JRKLQ9Y4A0 524 aa12.41□□□□□ -0.42
KCNMA1-259ENST00000639406 SRGAP3O43295 1099 aa12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 KANK3Q6NY19 840 aa12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 TSNARE1Q96NA8 513 aa12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 UTP14AQ9BVJ6 771 aaKnown RBP12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 DACT1Q9NYF0 836 aa12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 MINK1Q8N4C8 1332 aaPredicted RBP12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 LRRD1A4D1F6 860 aa12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 TRIM21P19474 475 aaKnown RBP12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 CHMP4BP1P59074 171 aa12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 WHAMMQ8TF30 809 aa12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 USH1CQ9Y6N9 552 aa12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 WIZO95785 1651 aa12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 PSMC4P43686 418 aa12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 MUM1Q2TAK8 710 aa12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 TMCO4Q5TGY1 634 aa12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 CCDC97Q96F63 343 aaPredicted RBP12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 GRIN2BQ13224 1484 aa12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 PSMD1Q99460 953 aa12.4□□□□□ -0.42
KCNMA1-259ENST00000639406 HSP90AA4PQ58FG1 418 aa12.4□□□□□ -0.43
KCNMA1-259ENST00000639406 ARHGEF2Q92974 986 aaKnown RBP12.4□□□□□ -0.43
KCNMA1-259ENST00000639406 GGNBP2Q9H3C7 697 aa12.4□□□□□ -0.43
KCNMA1-259ENST00000639406 PRKAR2BP31323 418 aa12.39□□□□□ -0.43
KCNMA1-259ENST00000639406 BMP2KLQ5H9B9 411 aa12.39□□□□□ -0.43
KCNMA1-259ENST00000639406 PRC1O43663 620 aa12.39□□□□□ -0.43
KCNMA1-259ENST00000639406 ZSCAN25Q6NSZ9 544 aa12.39□□□□□ -0.43
KCNMA1-259ENST00000639406 COG7P83436 770 aa12.39□□□□□ -0.43
KCNMA1-259ENST00000639406 SMC5Q8IY18 1101 aa12.39□□□□□ -0.43
KCNMA1-259ENST00000639406 TBC1D31Q96DN5 1066 aa12.39□□□□□ -0.43
KCNMA1-259ENST00000639406 MRFAP1Q9Y605 127 aa12.39□□□□□ -0.43
KCNMA1-259ENST00000639406 E7EVH7 732 aa12.39□□□□□ -0.43
KCNMA1-259ENST00000639406 IGHDP01880 384 aa12.39□□□□□ -0.43
KCNMA1-259ENST00000639406 KRT13P13646 458 aa12.39□□□□□ -0.43
KCNMA1-259ENST00000639406 MAP7D1Q3KQU3 841 aa12.39□□□□□ -0.43
KCNMA1-259ENST00000639406 LRRC45Q96CN5 670 aa12.39□□□□□ -0.43
KCNMA1-259ENST00000639406 ZSCAN16Q9H4T2 348 aaPredicted RBP12.39□□□□□ -0.43
KCNMA1-259ENST00000639406 FAF1Q9UNN5 650 aaPredicted RBP12.39□□□□□ -0.43
KCNMA1-259ENST00000639406 GOLGA6BA6NDN3 693 aa12.38□□□□□ -0.43
KCNMA1-259ENST00000639406 TUBB2AQ13885 445 aa12.38□□□□□ -0.43
KCNMA1-259ENST00000639406 GKAP1Q5VSY0 366 aaPredicted RBP12.38□□□□□ -0.43
KCNMA1-259ENST00000639406 TUBB2BQ9BVA1 445 aa12.38□□□□□ -0.43
KCNMA1-259ENST00000639406 ZNF500O60304 480 aaPredicted RBP12.38□□□□□ -0.43
KCNMA1-259ENST00000639406 KIF5AQ12840 1032 aa12.38□□□□□ -0.43
KCNMA1-259ENST00000639406 SPATS2Q86XZ4 545 aaKnown RBP12.38□□□□□ -0.43
KCNMA1-259ENST00000639406 RRBP1Q9P2E9 1410 aaKnown RBP12.38□□□□□ -0.43
KCNMA1-259ENST00000639406 PIK3R5Q8WYR1 880 aa12.38□□□□□ -0.43
KCNMA1-259ENST00000639406 IFNKQ9P0W0 207 aa12.38□□□□□ -0.43
KCNMA1-259ENST00000639406 TXNDC9O14530 226 aa12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 RPSAP08865 295 aaKnown RBP12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 CCDC170Q8IYT3 715 aa12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 MCUR1Q96AQ8 359 aa12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 NKTRP30414 1462 aaKnown RBP12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 BIRC2Q13490 618 aa12.37□□□□□ -0.43
KCNMA1-259ENST00000639406 E2F4Q16254 413 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms