RNA–Protein interactions for RNA: ENST00000639120.1

KCNMA1-252, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5 BASIC

Gene KCNMA1, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-252ENST00000639120 ZSWIM6Q9HCJ5 1215 aa24.33■■□□□ 1.49
KCNMA1-252ENST00000639120 TRMT1Q9NXH9 659 aaKnown RBP24.33■■□□□ 1.49
KCNMA1-252ENST00000639120 HOXC9P31274 260 aa24.33■■□□□ 1.48
KCNMA1-252ENST00000639120 IQCB1Q15051 598 aa24.33■■□□□ 1.48
KCNMA1-252ENST00000639120 TRERF1Q96PN7 1200 aa24.33■■□□□ 1.48
KCNMA1-252ENST00000639120 NFAT5O94916 1531 aa24.32■■□□□ 1.48
KCNMA1-252ENST00000639120 SOS1Q07889 1333 aaPredicted RBP24.32■■□□□ 1.48
KCNMA1-252ENST00000639120 BMS1Q14692 1282 aaKnown RBP24.32■■□□□ 1.48
KCNMA1-252ENST00000639120 CCAR2Q8N163 923 aaKnown RBP24.32■■□□□ 1.48
KCNMA1-252ENST00000639120 GTF3C6Q969F1 213 aa24.32■■□□□ 1.48
KCNMA1-252ENST00000639120 TFIP11Q9UBB9 837 aaKnown RBP24.32■■□□□ 1.48
KCNMA1-252ENST00000639120 LTBP4Q8N2S1 1624 aa24.32■■□□□ 1.48
KCNMA1-252ENST00000639120 SLIT3O75094 1523 aa24.32■■□□□ 1.48
KCNMA1-252ENST00000639120 NPHP1O15259 732 aa24.32■■□□□ 1.48
KCNMA1-252ENST00000639120 PDIA4P13667 645 aaKnown RBP24.32■■□□□ 1.48
KCNMA1-252ENST00000639120 PTH1RQ03431 593 aa24.32■■□□□ 1.48
KCNMA1-252ENST00000639120 MRFAP1L1Q96HT8 127 aa24.32■■□□□ 1.48
KCNMA1-252ENST00000639120 SPATA32Q96LK8 384 aa24.32■■□□□ 1.48
KCNMA1-252ENST00000639120 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.32■■□□□ 1.48
KCNMA1-252ENST00000639120 ALS2Q96Q42 1657 aa24.31■■□□□ 1.48
KCNMA1-252ENST00000639120 FAM208AQ9UK61 1670 aaKnown RBP24.31■■□□□ 1.48
KCNMA1-252ENST00000639120 SPATA31A3Q5VYP0 1347 aa24.31■■□□□ 1.48
KCNMA1-252ENST00000639120 LEO1Q8WVC0 666 aaPredicted RBP24.31■■□□□ 1.48
KCNMA1-252ENST00000639120 SCAND2PQ9GZW5 306 aaPredicted RBP24.3■■□□□ 1.48
KCNMA1-252ENST00000639120 TPCN1Q9ULQ1 816 aa24.3■■□□□ 1.48
KCNMA1-252ENST00000639120 CYP46A1Q9Y6A2 500 aa24.3■■□□□ 1.48
KCNMA1-252ENST00000639120 GOLGA6L4A6NEF3 574 aa24.3■■□□□ 1.48
KCNMA1-252ENST00000639120 CCDC69A6NI79 296 aa24.3■■□□□ 1.48
KCNMA1-252ENST00000639120 CNTROBQ8N137 903 aa24.3■■□□□ 1.48
KCNMA1-252ENST00000639120 LRRN4CLQ8ND94 238 aa24.3■■□□□ 1.48
KCNMA1-252ENST00000639120 DDX54Q8TDD1 881 aaKnown RBP24.3■■□□□ 1.48
KCNMA1-252ENST00000639120 PGBD1Q96JS3 809 aa24.3■■□□□ 1.48
KCNMA1-252ENST00000639120 ERCC6LQ2NKX8 1250 aa24.29■■□□□ 1.48
KCNMA1-252ENST00000639120 RNF20Q5VTR2 975 aa24.29■■□□□ 1.48
KCNMA1-252ENST00000639120 PRPF40BQ6NWY9 871 aaKnown RBP24.29■■□□□ 1.48
KCNMA1-252ENST00000639120 TRIM34Q9BYJ4 488 aa24.29■■□□□ 1.48
KCNMA1-252ENST00000639120 TM6SF1Q9BZW5 370 aa24.29■■□□□ 1.48
KCNMA1-252ENST00000639120 KCND1Q9NSA2 647 aa24.29■■□□□ 1.48
KCNMA1-252ENST00000639120 FEZ2Q9UHY8 353 aaPredicted RBP24.29■■□□□ 1.48
KCNMA1-252ENST00000639120 C11orf57Q6ZUT1 292 aaPredicted RBP24.29■■□□□ 1.48
KCNMA1-252ENST00000639120 IP6K1Q92551 441 aa24.29■■□□□ 1.48
KCNMA1-252ENST00000639120 KCNB2Q92953 911 aa24.29■■□□□ 1.48
KCNMA1-252ENST00000639120 USP16Q9Y5T5 823 aa24.29■■□□□ 1.48
KCNMA1-252ENST00000639120 PLA2G4AP47712 749 aa24.28■■□□□ 1.48
KCNMA1-252ENST00000639120 SSH3Q8TE77 659 aa24.28■■□□□ 1.48
KCNMA1-252ENST00000639120 CLCN6P51797 869 aa24.28■■□□□ 1.48
KCNMA1-252ENST00000639120 FLIIQ13045 1269 aa24.28■■□□□ 1.48
KCNMA1-252ENST00000639120 L2HGDHQ9H9P8 463 aa24.28■■□□□ 1.48
KCNMA1-252ENST00000639120 SOS2Q07890 1332 aaPredicted RBP24.27■■□□□ 1.48
KCNMA1-252ENST00000639120 PNMA6AP0CW24 399 aaPredicted RBP24.27■■□□□ 1.48
KCNMA1-252ENST00000639120 COL9A3Q14050 684 aaPredicted RBP24.27■■□□□ 1.48
KCNMA1-252ENST00000639120 CACNA1FO60840 1977 aa24.26■■□□□ 1.47
KCNMA1-252ENST00000639120 CAVIN2O95810 425 aa24.26■■□□□ 1.47
KCNMA1-252ENST00000639120 RAD51AP2Q09MP3 1159 aa24.26■■□□□ 1.47
KCNMA1-252ENST00000639120 RHPN1Q8TCX5 695 aa24.26■■□□□ 1.47
KCNMA1-252ENST00000639120 USP44Q9H0E7 712 aa24.26■■□□□ 1.47
KCNMA1-252ENST00000639120 TSPYL1Q9H0U9 437 aa24.26■■□□□ 1.47
KCNMA1-252ENST00000639120 TSPYL4Q9UJ04 414 aa24.26■■□□□ 1.47
KCNMA1-252ENST00000639120 LTN1O94822 1766 aa24.26■■□□□ 1.47
KCNMA1-252ENST00000639120 ARHGEF25Q86VW2 580 aa24.26■■□□□ 1.47
KCNMA1-252ENST00000639120 GOLGA6L19H0YKK7 550 aa24.25■■□□□ 1.47
KCNMA1-252ENST00000639120 RAB11FIP3O75154 756 aa24.25■■□□□ 1.47
KCNMA1-252ENST00000639120 FILIP1Q7Z7B0 1213 aa24.25■■□□□ 1.47
KCNMA1-252ENST00000639120 SURF6O75683 361 aaKnown RBP24.24■■□□□ 1.47
KCNMA1-252ENST00000639120 BICD2Q8TD16 824 aa24.24■■□□□ 1.47
KCNMA1-252ENST00000639120 LTV1Q96GA3 475 aaPredicted RBP24.24■■□□□ 1.47
KCNMA1-252ENST00000639120 RGPD1P0DJD0 1748 aa24.24■■□□□ 1.47
KCNMA1-252ENST00000639120 CCDC93Q567U6 631 aa24.24■■□□□ 1.47
KCNMA1-252ENST00000639120 LARP1Q6PKG0 1096 aaKnown RBP24.24■■□□□ 1.47
KCNMA1-252ENST00000639120 ADCY9O60503 1353 aa24.24■■□□□ 1.47
KCNMA1-252ENST00000639120 PDCP20941 246 aa24.23■■□□□ 1.47
KCNMA1-252ENST00000639120 STK31Q9BXU1 1019 aa24.23■■□□□ 1.47
KCNMA1-252ENST00000639120 KIF2AO00139 706 aaPredicted RBP24.23■■□□□ 1.47
KCNMA1-252ENST00000639120 NECTIN1Q15223 517 aa24.23■■□□□ 1.47
KCNMA1-252ENST00000639120 POLA2Q14181 598 aa24.22■■□□□ 1.47
KCNMA1-252ENST00000639120 MED1Q15648 1581 aaPredicted RBP24.22■■□□□ 1.47
KCNMA1-252ENST00000639120 ZRANB2O95218 330 aaKnown RBP eCLIP24.22■■□□□ 1.47
KCNMA1-252ENST00000639120 PPP1R42Q7Z4L9 355 aa24.22■■□□□ 1.47
KCNMA1-252ENST00000639120 EYA1Q99502 592 aa24.22■■□□□ 1.47
KCNMA1-252ENST00000639120 PHRF1Q9P1Y6 1649 aaKnown RBP24.21■■□□□ 1.47
KCNMA1-252ENST00000639120 UBTFL1P0CB47 393 aaPredicted RBP24.21■■□□□ 1.47
KCNMA1-252ENST00000639120 NFATC2IPQ8NCF5 419 aa24.21■■□□□ 1.47
KCNMA1-252ENST00000639120 IGSF1Q8N6C5 1336 aa24.21■■□□□ 1.47
KCNMA1-252ENST00000639120 ZC3H6P61129 1189 aaKnown RBP24.21■■□□□ 1.47
KCNMA1-252ENST00000639120 SNW1Q13573 536 aaKnown RBP24.21■■□□□ 1.47
KCNMA1-252ENST00000639120 E4F1Q66K89 784 aaPredicted RBP24.21■■□□□ 1.47
KCNMA1-252ENST00000639120 DHX40Q8IX18 779 aaKnown RBP24.21■■□□□ 1.47
KCNMA1-252ENST00000639120 NEK11Q8NG66 645 aa24.21■■□□□ 1.47
KCNMA1-252ENST00000639120 HTATSF1O43719 755 aaKnown RBP24.2■■□□□ 1.46
KCNMA1-252ENST00000639120 MYH15Q9Y2K3 1946 aa24.19■■□□□ 1.46
KCNMA1-252ENST00000639120 NHSL1Q5SYE7 1610 aa24.19■■□□□ 1.46
KCNMA1-252ENST00000639120 MAP3K5Q99683 1374 aa24.19■■□□□ 1.46
KCNMA1-252ENST00000639120 ARHGAP29Q52LW3 1261 aa24.19■■□□□ 1.46
KCNMA1-252ENST00000639120 CABLES1Q8TDN4 633 aa24.19■■□□□ 1.46
KCNMA1-252ENST00000639120 SYTL4Q96C24 671 aaPredicted RBP24.19■■□□□ 1.46
KCNMA1-252ENST00000639120 USP42Q9H9J4 1324 aaKnown RBP24.18■■□□□ 1.46
KCNMA1-252ENST00000639120 STX1AQ16623 288 aa24.18■■□□□ 1.46
KCNMA1-252ENST00000639120 SYT10Q6XYQ8 523 aa24.18■■□□□ 1.46
KCNMA1-252ENST00000639120 NECTIN2Q92692 538 aa24.18■■□□□ 1.46
KCNMA1-252ENST00000639120 PPP1R13BQ96KQ4 1090 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms