RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 IKQ13123 557 aaPredicted RBP19.29■□□□□ 0.68
SCARB2-210ENST00000638567 CHAMP1Q96JM3 812 aa19.29■□□□□ 0.68
SCARB2-210ENST00000638567 USP19O94966 1318 aa19.29■□□□□ 0.68
SCARB2-210ENST00000638567 BCORL1Q5H9F3 1711 aa19.29■□□□□ 0.68
SCARB2-210ENST00000638567 SSRP1Q08945 709 aaKnown RBP19.29■□□□□ 0.68
SCARB2-210ENST00000638567 KIF4BQ2VIQ3 1234 aa19.29■□□□□ 0.68
SCARB2-210ENST00000638567 TMEM67Q5HYA8 995 aa19.29■□□□□ 0.68
SCARB2-210ENST00000638567 AOPEPQ8N6M6 819 aa19.29■□□□□ 0.68
SCARB2-210ENST00000638567 CCDC102AQ96A19 550 aa19.29■□□□□ 0.68
SCARB2-210ENST00000638567 ANKRD18BA2A2Z9 1011 aa19.28■□□□□ 0.68
SCARB2-210ENST00000638567 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.28■□□□□ 0.686e-6■■■■■ 38.2
SCARB2-210ENST00000638567 KRT18P05783 430 aaKnown RBP19.28■□□□□ 0.68
SCARB2-210ENST00000638567 TANGO6Q9C0B7 1094 aa19.28■□□□□ 0.68
SCARB2-210ENST00000638567 CCDC102BQ68D86 513 aa19.28■□□□□ 0.68
SCARB2-210ENST00000638567 BICC1Q9H694 974 aaKnown RBP19.28■□□□□ 0.68
SCARB2-210ENST00000638567 RANBP6O60518 1105 aaKnown RBP19.27■□□□□ 0.68
SCARB2-210ENST00000638567 SYKP43405 635 aa19.27■□□□□ 0.68
SCARB2-210ENST00000638567 ATP2B2Q01814 1243 aa19.27■□□□□ 0.68
SCARB2-210ENST00000638567 SOGA3Q5TF21 947 aa19.27■□□□□ 0.68
SCARB2-210ENST00000638567 RAD50Q92878 1312 aa19.27■□□□□ 0.68
SCARB2-210ENST00000638567 RTL1A6NKG5 1358 aa19.27■□□□□ 0.68
SCARB2-210ENST00000638567 BRD1O95696 1058 aa19.27■□□□□ 0.68
SCARB2-210ENST00000638567 BICDL1Q6ZP65 573 aa19.27■□□□□ 0.68
SCARB2-210ENST00000638567 ZHX3Q9H4I2 956 aa19.27■□□□□ 0.68
SCARB2-210ENST00000638567 H0YHG0 523 aa19.27■□□□□ 0.67
SCARB2-210ENST00000638567 CASQ1P31415 396 aa19.27■□□□□ 0.67
SCARB2-210ENST00000638567 CCDC181Q5TID7 509 aa19.27■□□□□ 0.67
SCARB2-210ENST00000638567 CCDC43Q96MW1 224 aaKnown RBP19.27■□□□□ 0.67
SCARB2-210ENST00000638567 POLR3GO15318 223 aaPredicted RBP19.26■□□□□ 0.67
SCARB2-210ENST00000638567 KIF5CO60282 957 aa19.26■□□□□ 0.67
SCARB2-210ENST00000638567 APOBRQ0VD83 1088 aa19.26■□□□□ 0.67
SCARB2-210ENST00000638567 HSP90AA4PQ58FG1 418 aa19.26■□□□□ 0.67
SCARB2-210ENST00000638567 CDR1P51861 262 aa19.26■□□□□ 0.67
SCARB2-210ENST00000638567 NFATC2IPQ8NCF5 419 aa19.26■□□□□ 0.67
SCARB2-210ENST00000638567 KCNG4Q8TDN1 519 aa19.26■□□□□ 0.67
SCARB2-210ENST00000638567 SLC26A6Q9BXS9 759 aa19.26■□□□□ 0.67
SCARB2-210ENST00000638567 PALD1Q9ULE6 856 aa19.26■□□□□ 0.67
SCARB2-210ENST00000638567 SAMD9LQ8IVG5 1584 aa19.26■□□□□ 0.67
SCARB2-210ENST00000638567 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.26■□□□□ 0.67
SCARB2-210ENST00000638567 V9GYY5 206 aaPredicted RBP19.26■□□□□ 0.67
SCARB2-210ENST00000638567 SSBP05455 408 aaKnown RBP eCLIP19.26■□□□□ 0.67
SCARB2-210ENST00000638567 MARCKSP29966 332 aaPredicted RBP19.26■□□□□ 0.67
SCARB2-210ENST00000638567 KIAA1328Q86T90 577 aa19.26■□□□□ 0.67
SCARB2-210ENST00000638567 SYNMO15061 1565 aa19.26■□□□□ 0.67
SCARB2-210ENST00000638567 PATL2C9JE40 543 aaKnown RBP19.25■□□□□ 0.67
SCARB2-210ENST00000638567 FAM193AP78312 1265 aa19.25■□□□□ 0.67
SCARB2-210ENST00000638567 C17orf53Q8N3J3 647 aaPredicted RBP19.25■□□□□ 0.67
SCARB2-210ENST00000638567 FSD2A1L4K1 749 aa19.25■□□□□ 0.67
SCARB2-210ENST00000638567 CCDC150Q8NCX0 1101 aa19.25■□□□□ 0.67
SCARB2-210ENST00000638567 FAM227BQ96M60 508 aa19.25■□□□□ 0.67
SCARB2-210ENST00000638567 KDM5DQ9BY66 1539 aa19.25■□□□□ 0.67
SCARB2-210ENST00000638567 TFCP2Q12800 502 aa19.25■□□□□ 0.67
SCARB2-210ENST00000638567 KLHDC4Q8TBB5 520 aa19.25■□□□□ 0.67
SCARB2-210ENST00000638567 PTPDC1A2A3K4 754 aa19.24■□□□□ 0.67
SCARB2-210ENST00000638567 CTCFLQ8NI51 663 aaPredicted RBP19.24■□□□□ 0.67
SCARB2-210ENST00000638567 ALG1Q9BT22 464 aa19.24■□□□□ 0.67
SCARB2-210ENST00000638567 PAG1Q9NWQ8 432 aa19.24■□□□□ 0.67
SCARB2-210ENST00000638567 LMOD1P29536 600 aaPredicted RBP19.24■□□□□ 0.67
SCARB2-210ENST00000638567 PRDM15P57071 1507 aaPredicted RBP19.24■□□□□ 0.67
SCARB2-210ENST00000638567 SLC5A1P13866 664 aa19.24■□□□□ 0.67
SCARB2-210ENST00000638567 HSPA4P34932 840 aa19.24■□□□□ 0.67
SCARB2-210ENST00000638567 IL15P40933 162 aaPredicted RBP19.24■□□□□ 0.67
SCARB2-210ENST00000638567 UBASH3AP57075 661 aa19.24■□□□□ 0.67
SCARB2-210ENST00000638567 IQCA1Q86XH1 822 aa19.24■□□□□ 0.67
SCARB2-210ENST00000638567 LGR6Q9HBX8 967 aa19.24■□□□□ 0.67
SCARB2-210ENST00000638567 UGGT1Q9NYU2 1555 aa19.23■□□□□ 0.67
SCARB2-210ENST00000638567 GNG11P61952 73 aa19.23■□□□□ 0.67
SCARB2-210ENST00000638567 DHX32Q7L7V1 743 aaKnown RBP19.23■□□□□ 0.67
SCARB2-210ENST00000638567 RNF41Q9H4P4 317 aaPredicted RBP19.23■□□□□ 0.67
SCARB2-210ENST00000638567 ABCA8O94911 1581 aa19.23■□□□□ 0.67
SCARB2-210ENST00000638567 HSP90AB3PQ58FF7 597 aa19.23■□□□□ 0.67
SCARB2-210ENST00000638567 DDX21Q9NR30 783 aaKnown RBP eCLIP19.23■□□□□ 0.67
SCARB2-210ENST00000638567 KIAA0232Q92628 1395 aa19.23■□□□□ 0.67
SCARB2-210ENST00000638567 ZFYP08048 801 aaPredicted RBP19.22■□□□□ 0.67
SCARB2-210ENST00000638567 CT47A1Q5JQC4 288 aaPredicted RBP19.22■□□□□ 0.67
SCARB2-210ENST00000638567 ZSWIM4Q9H7M6 989 aa19.22■□□□□ 0.67
SCARB2-210ENST00000638567 AOX1Q06278 1338 aa19.22■□□□□ 0.67
SCARB2-210ENST00000638567 KCNA6P17658 529 aa19.22■□□□□ 0.67
SCARB2-210ENST00000638567 TTF1Q15361 905 aaPredicted RBP19.22■□□□□ 0.67
SCARB2-210ENST00000638567 USP44Q9H0E7 712 aa19.22■□□□□ 0.67
SCARB2-210ENST00000638567 DNAI1Q9UI46 699 aa19.22■□□□□ 0.67
SCARB2-210ENST00000638567 SBNO1A3KN83 1393 aa19.22■□□□□ 0.67
SCARB2-210ENST00000638567 SLC27A2O14975 620 aa19.22■□□□□ 0.67
SCARB2-210ENST00000638567 SPTLC2O15270 562 aa19.22■□□□□ 0.67
SCARB2-210ENST00000638567 PRC1O43663 620 aa19.22■□□□□ 0.67
SCARB2-210ENST00000638567 LUC7LQ9NQ29 371 aaKnown RBP19.22■□□□□ 0.67
SCARB2-210ENST00000638567 KIF24Q5T7B8 1368 aa19.22■□□□□ 0.67
SCARB2-210ENST00000638567 RNMTO43148 476 aaKnown RBP19.21■□□□□ 0.67
SCARB2-210ENST00000638567 ZBTB43O43298 467 aa19.21■□□□□ 0.67
SCARB2-210ENST00000638567 GCP02774 474 aa19.21■□□□□ 0.67
SCARB2-210ENST00000638567 JAKMIP3Q5VZ66 844 aa19.21■□□□□ 0.67
SCARB2-210ENST00000638567 ATP2B3Q16720 1220 aa19.21■□□□□ 0.67
SCARB2-210ENST00000638567 IP6K1Q92551 441 aa19.21■□□□□ 0.67
SCARB2-210ENST00000638567 CTDP1Q9Y5B0 961 aaPredicted RBP19.21■□□□□ 0.67
SCARB2-210ENST00000638567 CCDC129Q6ZRS4 1044 aa19.21■□□□□ 0.67
SCARB2-210ENST00000638567 RPS6KB1P23443 525 aa19.2■□□□□ 0.66
SCARB2-210ENST00000638567 MFSD6Q6ZSS7 791 aa19.2■□□□□ 0.66
SCARB2-210ENST00000638567 PLXNC1O60486 1568 aa19.2■□□□□ 0.66
SCARB2-210ENST00000638567 CAVIN4Q5BKX8 364 aa19.2■□□□□ 0.66
SCARB2-210ENST00000638567 PPP1R9BQ96SB3 815 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms