RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 HDAC5Q9UQL6 1122 aa12.11□□□□□ -0.47
ATM-226ENST00000638443 UBN2Q6ZU65 1347 aa12.11□□□□□ -0.47
ATM-226ENST00000638443 GTPBP6O43824 516 aaPredicted RBP12.11□□□□□ -0.47
ATM-226ENST00000638443 CLASRPQ8N2M8 674 aaKnown RBP12.11□□□□□ -0.47
ATM-226ENST00000638443 CCDC87Q9NVE4 849 aa12.11□□□□□ -0.47
ATM-226ENST00000638443 COL15A1P39059 1388 aa12.11□□□□□ -0.47
ATM-226ENST00000638443 IL6STP40189 918 aaPredicted RBP12.1□□□□□ -0.47
ATM-226ENST00000638443 LINC00116Q8NCU8 138 aa12.1□□□□□ -0.47
ATM-226ENST00000638443 KIF2CQ99661 725 aa12.1□□□□□ -0.47
ATM-226ENST00000638443 COL5A3P25940 1745 aaPredicted RBP12.1□□□□□ -0.47
ATM-226ENST00000638443 ANKRD36CQ5JPF3 1778 aa12.1□□□□□ -0.47
ATM-226ENST00000638443 EIF5P55010 431 aaKnown RBP12.1□□□□□ -0.47
ATM-226ENST00000638443 TFCP2Q12800 502 aa12.1□□□□□ -0.47
ATM-226ENST00000638443 NLRP10Q86W26 655 aa12.1□□□□□ -0.47
ATM-226ENST00000638443 COPRSQ9NQ92 184 aa12.1□□□□□ -0.47
ATM-226ENST00000638443 RREB1Q92766 1687 aa12.09□□□□□ -0.47
ATM-226ENST00000638443 BTAF1O14981 1849 aa12.09□□□□□ -0.47
ATM-226ENST00000638443 FAM177BA6PVY3 158 aa12.09□□□□□ -0.47
ATM-226ENST00000638443 ERC1Q8IUD2 1116 aa12.09□□□□□ -0.47
ATM-226ENST00000638443 HS6ST3Q8IZP7 471 aa12.09□□□□□ -0.47
ATM-226ENST00000638443 ATRNO75882 1429 aa12.09□□□□□ -0.47
ATM-226ENST00000638443 NUP98P52948 1817 aa12.09□□□□□ -0.47
ATM-226ENST00000638443 CICQ96RK0 1608 aaPredicted RBP12.08□□□□□ -0.47
ATM-226ENST00000638443 IFIT2P09913 472 aaKnown RBP12.08□□□□□ -0.47
ATM-226ENST00000638443 LRRC24Q50LG9 513 aa12.08□□□□□ -0.47
ATM-226ENST00000638443 CERS3Q8IU89 383 aa12.08□□□□□ -0.47
ATM-226ENST00000638443 TBC1D2Q9BYX2 928 aa12.08□□□□□ -0.47
ATM-226ENST00000638443 NHSQ6T4R5 1651 aa12.08□□□□□ -0.48
ATM-226ENST00000638443 AOX1Q06278 1338 aa12.08□□□□□ -0.48
ATM-226ENST00000638443 SEPT12Q8IYM1 358 aa12.08□□□□□ -0.48
ATM-226ENST00000638443 KCNV2Q8TDN2 545 aa12.08□□□□□ -0.48
ATM-226ENST00000638443 ZNF592Q92610 1267 aa12.08□□□□□ -0.48
ATM-226ENST00000638443 PUS3Q9BZE2 481 aaKnown RBP12.08□□□□□ -0.48
ATM-226ENST00000638443 USP42Q9H9J4 1324 aaKnown RBP12.07□□□□□ -0.48
ATM-226ENST00000638443 PCCAP05165 728 aaPredicted RBP12.07□□□□□ -0.48
ATM-226ENST00000638443 CHMLP26374 656 aa12.07□□□□□ -0.48
ATM-226ENST00000638443 ATG9AQ7Z3C6 839 aa12.07□□□□□ -0.48
ATM-226ENST00000638443 NDUFB9Q9Y6M9 179 aa12.07□□□□□ -0.48
ATM-226ENST00000638443 CAMTA2O94983 1202 aa12.07□□□□□ -0.48
ATM-226ENST00000638443 CD2BP2O95400 341 aaKnown RBP12.07□□□□□ -0.48
ATM-226ENST00000638443 TRIM28Q13263 835 aaKnown RBP12.07□□□□□ -0.48
ATM-226ENST00000638443 AMIGO3Q86WK7 504 aa12.07□□□□□ -0.48
ATM-226ENST00000638443 ZBTB38Q8NAP3 1195 aaPredicted RBP12.07□□□□□ -0.48
ATM-226ENST00000638443 ECHDC1Q9NTX5 307 aa12.07□□□□□ -0.48
ATM-226ENST00000638443 DBNLQ9UJU6 430 aaKnown RBP12.07□□□□□ -0.48
ATM-226ENST00000638443 TNNI3KQ59H18 835 aa12.06□□□□□ -0.48
ATM-226ENST00000638443 SMARCC1Q92922 1105 aaPredicted RBP12.06□□□□□ -0.48
ATM-226ENST00000638443 EDC3Q96F86 508 aaKnown RBP12.06□□□□□ -0.48
ATM-226ENST00000638443 ESYT1Q9BSJ8 1104 aa12.06□□□□□ -0.48
ATM-226ENST00000638443 USP26Q9BXU7 913 aa12.06□□□□□ -0.48
ATM-226ENST00000638443 TRMT112Q9UI30 125 aaKnown RBP12.06□□□□□ -0.48
ATM-226ENST00000638443 TRPC5Q9UL62 973 aaPredicted RBP12.06□□□□□ -0.48
ATM-226ENST00000638443 FPGT-TNNI3KV9GXZ4 949 aa12.06□□□□□ -0.48
ATM-226ENST00000638443 TTC41PQ6P2S7 1318 aa12.06□□□□□ -0.48
ATM-226ENST00000638443 CASC1Q6TDU7 716 aa12.05□□□□□ -0.48
ATM-226ENST00000638443 DBNDD2Q9BQY9 259 aa12.05□□□□□ -0.48
ATM-226ENST00000638443 AK9Q5TCS8 1911 aa12.05□□□□□ -0.48
ATM-226ENST00000638443 ERVV-1B6SEH8 477 aa12.05□□□□□ -0.48
ATM-226ENST00000638443 ERC2O15083 957 aa12.05□□□□□ -0.48
ATM-226ENST00000638443 GLRX3O76003 335 aaKnown RBP12.05□□□□□ -0.48
ATM-226ENST00000638443 SUSD4Q5VX71 490 aa12.05□□□□□ -0.48
ATM-226ENST00000638443 TMED8Q6PL24 325 aaPredicted RBP12.05□□□□□ -0.48
ATM-226ENST00000638443 ZNF34Q8IZ26 560 aa12.05□□□□□ -0.48
ATM-226ENST00000638443 BOLA2Q9H3K6 86 aa12.05□□□□□ -0.48
ATM-226ENST00000638443 GREM2Q9H772 168 aa12.05□□□□□ -0.48
ATM-226ENST00000638443 QTRT2Q9H974 415 aaKnown RBP12.05□□□□□ -0.48
ATM-226ENST00000638443 IRS4O14654 1257 aaPredicted RBP12.04□□□□□ -0.48
ATM-226ENST00000638443 HSP90AB3PQ58FF7 597 aa12.04□□□□□ -0.48
ATM-226ENST00000638443 ANP32EQ9BTT0 268 aa12.04□□□□□ -0.48
ATM-226ENST00000638443 SLKQ9H2G2 1235 aaPredicted RBP12.04□□□□□ -0.48
ATM-226ENST00000638443 CHGBP05060 677 aa12.04□□□□□ -0.48
ATM-226ENST00000638443 HCLS1P14317 486 aaPredicted RBP12.04□□□□□ -0.48
ATM-226ENST00000638443 CNTROBQ8N137 903 aa12.04□□□□□ -0.48
ATM-226ENST00000638443 WDR70Q9NW82 654 aa12.04□□□□□ -0.48
ATM-226ENST00000638443 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.04□□□□□ -0.48
ATM-226ENST00000638443 SBF2Q86WG5 1849 aa12.03□□□□□ -0.48
ATM-226ENST00000638443 BCORQ6W2J9 1755 aa12.03□□□□□ -0.48
ATM-226ENST00000638443 TTLL11Q8NHH1 800 aa12.03□□□□□ -0.48
ATM-226ENST00000638443 PLA2G12BQ9BX93 195 aa12.03□□□□□ -0.48
ATM-226ENST00000638443 ANO2Q9NQ90 1003 aa12.03□□□□□ -0.48
ATM-226ENST00000638443 CDHR2Q9BYE9 1310 aa12.03□□□□□ -0.48
ATM-226ENST00000638443 COL4A1P02462 1669 aa12.03□□□□□ -0.48
ATM-226ENST00000638443 ZNF609O15014 1411 aa12.03□□□□□ -0.48
ATM-226ENST00000638443 EYA2O00167 538 aa12.02□□□□□ -0.48
ATM-226ENST00000638443 CTSWP56202 376 aa12.02□□□□□ -0.48
ATM-226ENST00000638443 TIMM10P62072 90 aa12.02□□□□□ -0.48
ATM-226ENST00000638443 CCDC57Q2TAC2 916 aa12.02□□□□□ -0.48
ATM-226ENST00000638443 CWC27Q6UX04 472 aaKnown RBP12.02□□□□□ -0.48
ATM-226ENST00000638443 GPATCH3Q96I76 525 aa12.02□□□□□ -0.48
ATM-226ENST00000638443 CCNL1Q9UK58 526 aaPredicted RBP12.02□□□□□ -0.48
ATM-226ENST00000638443 PALD1Q9ULE6 856 aa12.02□□□□□ -0.48
ATM-226ENST00000638443 NIP7Q9Y221 180 aaKnown RBP eCLIP12.02□□□□□ -0.48
ATM-226ENST00000638443 ZNF831Q5JPB2 1677 aa12.02□□□□□ -0.49
ATM-226ENST00000638443 RIC1Q4ADV7 1423 aa12.02□□□□□ -0.49
ATM-226ENST00000638443 ONECUT3O60422 494 aaPredicted RBP12.02□□□□□ -0.49
ATM-226ENST00000638443 CSF1RP07333 972 aa12.02□□□□□ -0.49
ATM-226ENST00000638443 ITGA6P23229 1130 aa12.02□□□□□ -0.49
ATM-226ENST00000638443 BECN1Q14457 450 aa12.02□□□□□ -0.49
ATM-226ENST00000638443 SRP68Q9UHB9 627 aaKnown RBP12.02□□□□□ -0.49
ATM-226ENST00000638443 GNPATO15228 680 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms