RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 ZSCAN31Q96LW9 406 aaPredicted RBP20.42■□□□□ 0.86
CACNA1A-227ENST00000636549 EMILIN1Q9Y6C2 1016 aa20.42■□□□□ 0.86
CACNA1A-227ENST00000636549 PTPN14Q15678 1187 aa20.41■□□□□ 0.86
CACNA1A-227ENST00000636549 CCDC175P0C221 793 aa20.41■□□□□ 0.86
CACNA1A-227ENST00000636549 SFPQP23246 707 aaKnown RBP eCLIP20.41■□□□□ 0.86
CACNA1A-227ENST00000636549 CTR9Q6PD62 1173 aa20.41■□□□□ 0.86
CACNA1A-227ENST00000636549 C16orf45Q96MC5 204 aaPredicted RBP20.41■□□□□ 0.86
CACNA1A-227ENST00000636549 RPGRIP1LQ68CZ1 1315 aa20.41■□□□□ 0.86
CACNA1A-227ENST00000636549 CCDC196A0A1B0GTZ2 297 aa20.41■□□□□ 0.86
CACNA1A-227ENST00000636549 NIP7Q9Y221 180 aaKnown RBP eCLIP20.41■□□□□ 0.86
CACNA1A-227ENST00000636549 TCEANC2Q96MN5 208 aa20.4■□□□□ 0.86
CACNA1A-227ENST00000636549 CWC25Q9NXE8 425 aaPredicted RBP20.4■□□□□ 0.86
CACNA1A-227ENST00000636549 FAM83GA6ND36 823 aa20.4■□□□□ 0.86
CACNA1A-227ENST00000636549 RXRAP19793 462 aa20.4■□□□□ 0.86
CACNA1A-227ENST00000636549 KCNH5Q8NCM2 988 aa20.4■□□□□ 0.86
CACNA1A-227ENST00000636549 KRT5P13647 590 aa20.4■□□□□ 0.86
CACNA1A-227ENST00000636549 GJB2P29033 226 aa20.4■□□□□ 0.86
CACNA1A-227ENST00000636549 UBA7P41226 1012 aa20.4■□□□□ 0.86
CACNA1A-227ENST00000636549 CCDC117Q8IWD4 279 aaPredicted RBP20.4■□□□□ 0.86
CACNA1A-227ENST00000636549 RRAGBQ5VZM2 374 aa20.4■□□□□ 0.86
CACNA1A-227ENST00000636549 TAOK3Q9H2K8 898 aa20.4■□□□□ 0.86
CACNA1A-227ENST00000636549 TTLL3Q9Y4R7 772 aa20.4■□□□□ 0.86
CACNA1A-227ENST00000636549 BBXQ8WY36 941 aaPredicted RBP20.4■□□□□ 0.86
CACNA1A-227ENST00000636549 JDP2Q8WYK2 163 aa20.4■□□□□ 0.86
CACNA1A-227ENST00000636549 CRNKL1Q9BZJ0 848 aaKnown RBP20.4■□□□□ 0.86
CACNA1A-227ENST00000636549 NACA2Q9H009 215 aa20.39■□□□□ 0.86
CACNA1A-227ENST00000636549 RBM27Q9P2N5 1060 aaKnown RBP20.39■□□□□ 0.86
CACNA1A-227ENST00000636549 TTC36A6NLP5 189 aa20.39■□□□□ 0.85
CACNA1A-227ENST00000636549 ABL1P00519 1130 aa20.39■□□□□ 0.85
CACNA1A-227ENST00000636549 STAT6P42226 847 aa20.39■□□□□ 0.85
CACNA1A-227ENST00000636549 NAPAP54920 295 aa20.39■□□□□ 0.85
CACNA1A-227ENST00000636549 IQCGQ9H095 443 aaKnown RBP20.39■□□□□ 0.85
CACNA1A-227ENST00000636549 CRCPO75575 148 aa20.38■□□□□ 0.85
CACNA1A-227ENST00000636549 PPP4R4Q6NUP7 873 aa20.38■□□□□ 0.85
CACNA1A-227ENST00000636549 CCDC25Q86WR0 208 aa20.38■□□□□ 0.85
CACNA1A-227ENST00000636549 NECAB1Q8N987 351 aa20.38■□□□□ 0.85
CACNA1A-227ENST00000636549 TTC21AQ8NDW8 1320 aa20.38■□□□□ 0.85
CACNA1A-227ENST00000636549 ZKSCAN3Q9BRR0 538 aa20.38■□□□□ 0.85
CACNA1A-227ENST00000636549 AMOTL2Q9Y2J4 779 aa20.38■□□□□ 0.85
CACNA1A-227ENST00000636549 NSD3Q9BZ95 1437 aa20.38■□□□□ 0.85
CACNA1A-227ENST00000636549 SPATA24Q86W54 205 aa20.38■□□□□ 0.85
CACNA1A-227ENST00000636549 SELENOSQ9BQE4 189 aa20.38■□□□□ 0.85
CACNA1A-227ENST00000636549 NSFL1CQ9UNZ2 370 aaKnown RBP20.38■□□□□ 0.85
CACNA1A-227ENST00000636549 FGD6Q6ZV73 1430 aa20.37■□□□□ 0.85
CACNA1A-227ENST00000636549 IARSP41252 1262 aaKnown RBP20.37■□□□□ 0.85
CACNA1A-227ENST00000636549 SNX16P57768 344 aa20.37■□□□□ 0.85
CACNA1A-227ENST00000636549 SMC1BQ8NDV3 1235 aa20.37■□□□□ 0.85
CACNA1A-227ENST00000636549 CCDC114Q96M63 670 aa20.37■□□□□ 0.85
CACNA1A-227ENST00000636549 RNF41Q9H4P4 317 aaPredicted RBP20.37■□□□□ 0.85
CACNA1A-227ENST00000636549 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.37■□□□□ 0.85
CACNA1A-227ENST00000636549 NFE2L2Q16236 605 aa20.37■□□□□ 0.85
CACNA1A-227ENST00000636549 STXBP4Q6ZWJ1 553 aa20.37■□□□□ 0.85
CACNA1A-227ENST00000636549 PPANQ9NQ55 473 aaKnown RBP20.37■□□□□ 0.85
CACNA1A-227ENST00000636549 AMPD3Q01432 767 aa20.37■□□□□ 0.85
CACNA1A-227ENST00000636549 FBXO31Q5XUX0 539 aaPredicted RBP20.37■□□□□ 0.85
CACNA1A-227ENST00000636549 CAPZA3Q96KX2 299 aa20.37■□□□□ 0.85
CACNA1A-227ENST00000636549 IFRD2Q12894 506 aaPredicted RBP20.37■□□□□ 0.85
CACNA1A-227ENST00000636549 KIAA0753Q2KHM9 967 aa20.37■□□□□ 0.85
CACNA1A-227ENST00000636549 KMT5BQ4FZB7 885 aa20.36■□□□□ 0.85
CACNA1A-227ENST00000636549 MARCKSP29966 332 aaPredicted RBP20.36■□□□□ 0.85
CACNA1A-227ENST00000636549 LRRC45Q96CN5 670 aa20.36■□□□□ 0.85
CACNA1A-227ENST00000636549 TMPOP42166 694 aaKnown RBP20.36■□□□□ 0.85
CACNA1A-227ENST00000636549 CCDC152Q4G0S7 254 aa20.36■□□□□ 0.85
CACNA1A-227ENST00000636549 SF3A3Q12874 501 aaKnown RBP eCLIP20.36■□□□□ 0.85
CACNA1A-227ENST00000636549 CNGA1P29973 690 aa20.36■□□□□ 0.85
CACNA1A-227ENST00000636549 ANO10Q9NW15 660 aa20.36■□□□□ 0.85
CACNA1A-227ENST00000636549 CEP83Q9Y592 693 aa20.35■□□□□ 0.85
CACNA1A-227ENST00000636549 ANKRD24Q8TF21 1146 aa20.35■□□□□ 0.85
CACNA1A-227ENST00000636549 GTF3C6Q969F1 213 aa20.35■□□□□ 0.85
CACNA1A-227ENST00000636549 ERCC3P19447 782 aa20.35■□□□□ 0.85
CACNA1A-227ENST00000636549 FAM160A1Q05DH4 1040 aa20.35■□□□□ 0.85
CACNA1A-227ENST00000636549 RNF169Q8NCN4 708 aa20.35■□□□□ 0.85
CACNA1A-227ENST00000636549 MAP7D1Q3KQU3 841 aa20.35■□□□□ 0.85
CACNA1A-227ENST00000636549 MSL1Q68DK7 614 aa20.35■□□□□ 0.85
CACNA1A-227ENST00000636549 ATAD2BQ9ULI0 1458 aa20.35■□□□□ 0.85
CACNA1A-227ENST00000636549 TTC30BQ8N4P2 665 aa20.35■□□□□ 0.85
CACNA1A-227ENST00000636549 DNAAF4Q8WXU2 420 aa20.35■□□□□ 0.85
CACNA1A-227ENST00000636549 MYCLP12524 364 aaPredicted RBP20.34■□□□□ 0.85
CACNA1A-227ENST00000636549 TNNI2P48788 182 aa20.34■□□□□ 0.85
CACNA1A-227ENST00000636549 FBF1Q8TES7 1133 aa20.34■□□□□ 0.85
CACNA1A-227ENST00000636549 GPCPD1Q9NPB8 672 aa20.34■□□□□ 0.85
CACNA1A-227ENST00000636549 MAK16Q9BXY0 300 aaKnown RBP20.34■□□□□ 0.85
CACNA1A-227ENST00000636549 PHF8Q9UPP1 1060 aa20.34■□□□□ 0.85
CACNA1A-227ENST00000636549 SLU7O95391 586 aaKnown RBP20.34■□□□□ 0.85
CACNA1A-227ENST00000636549 DCAF17Q5H9S7 520 aaPredicted RBP20.34■□□□□ 0.85
CACNA1A-227ENST00000636549 GPHNQ9NQX3 736 aaPredicted RBP20.34■□□□□ 0.85
CACNA1A-227ENST00000636549 CCDC6Q16204 474 aa20.34■□□□□ 0.85
CACNA1A-227ENST00000636549 PHAXQ9H814 394 aaKnown RBP20.34■□□□□ 0.85
CACNA1A-227ENST00000636549 NBPF8Q3BBV2 869 aa20.33■□□□□ 0.85
CACNA1A-227ENST00000636549 NBPF14Q5TI25 921 aa20.33■□□□□ 0.85
CACNA1A-227ENST00000636549 CCDC12Q8WUD4 166 aaPredicted RBP20.33■□□□□ 0.85
CACNA1A-227ENST00000636549 POGZQ7Z3K3 1410 aa20.33■□□□□ 0.85
CACNA1A-227ENST00000636549 MCM7P33993 719 aa20.33■□□□□ 0.85
CACNA1A-227ENST00000636549 WTAPQ15007 396 aa20.33■□□□□ 0.85
CACNA1A-227ENST00000636549 PDCL2Q8N4E4 241 aa20.33■□□□□ 0.85
CACNA1A-227ENST00000636549 ANKRD30BQ9BXX2 1392 aa20.33■□□□□ 0.85
CACNA1A-227ENST00000636549 GLRX3O76003 335 aaKnown RBP20.33■□□□□ 0.85
CACNA1A-227ENST00000636549 SATB1Q01826 763 aa20.33■□□□□ 0.84
CACNA1A-227ENST00000636549 GTF2F1P35269 517 aaKnown RBP eCLIP20.33■□□□□ 0.84
CACNA1A-227ENST00000636549 GPR162Q16538 588 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms