RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 SRCIN1Q9C0H9 1055 aa11.25□□□□□ -0.61
CHD2-216ENST00000629104 ZNF219Q9P2Y4 722 aaPredicted RBP11.25□□□□□ -0.61
CHD2-216ENST00000629104 ABCC4O15439 1325 aa11.25□□□□□ -0.61
CHD2-216ENST00000629104 KIF16BQ96L93 1317 aa11.25□□□□□ -0.61
CHD2-216ENST00000629104 COL4A1P02462 1669 aa11.24□□□□□ -0.61
CHD2-216ENST00000629104 LRRC37AA6NMS7 1700 aa11.24□□□□□ -0.61
CHD2-216ENST00000629104 BCAR3O75815 825 aa11.24□□□□□ -0.61
CHD2-216ENST00000629104 CASP7P55210 303 aa11.24□□□□□ -0.61
CHD2-216ENST00000629104 SOGA3Q5TF21 947 aa11.24□□□□□ -0.61
CHD2-216ENST00000629104 DDX46Q7L014 1031 aaKnown RBP11.24□□□□□ -0.61
CHD2-216ENST00000629104 SPEF2Q9C093 1822 aa11.23□□□□□ -0.61
CHD2-216ENST00000629104 DICER1Q9UPY3 1922 aaKnown RBP11.23□□□□□ -0.61
CHD2-216ENST00000629104 NFKBIEO00221 500 aa11.23□□□□□ -0.61
CHD2-216ENST00000629104 GRM8O00222 908 aa11.23□□□□□ -0.61
CHD2-216ENST00000629104 PPEF1O14829 653 aaPredicted RBP11.23□□□□□ -0.61
CHD2-216ENST00000629104 CTSWP56202 376 aa11.23□□□□□ -0.61
CHD2-216ENST00000629104 GRAPQ13588 217 aa11.23□□□□□ -0.61
CHD2-216ENST00000629104 CCDC93Q567U6 631 aa11.23□□□□□ -0.61
CHD2-216ENST00000629104 GRAPLQ8TC17 118 aaPredicted RBP11.23□□□□□ -0.61
CHD2-216ENST00000629104 ARHGAP45Q92619 1136 aa11.23□□□□□ -0.61
CHD2-216ENST00000629104 PLA2G12BQ9BX93 195 aa11.23□□□□□ -0.61
CHD2-216ENST00000629104 API5Q9BZZ5 524 aaKnown RBP11.23□□□□□ -0.61
CHD2-216ENST00000629104 SNED1Q8TER0 1413 aa11.23□□□□□ -0.61
CHD2-216ENST00000629104 BBOX1O75936 387 aa11.22□□□□□ -0.61
CHD2-216ENST00000629104 YY1P25490 414 aa11.22□□□□□ -0.61
CHD2-216ENST00000629104 RASSF7Q02833 373 aa11.22□□□□□ -0.61
CHD2-216ENST00000629104 CCDC152Q4G0S7 254 aa11.22□□□□□ -0.61
CHD2-216ENST00000629104 OLFM4Q6UX06 510 aa11.22□□□□□ -0.61
CHD2-216ENST00000629104 TIAM2Q8IVF5 1701 aa11.22□□□□□ -0.61
CHD2-216ENST00000629104 C9orf78Q9NZ63 289 aaPredicted RBP11.22□□□□□ -0.61
CHD2-216ENST00000629104 UTYO14607 1347 aa11.21□□□□□ -0.61
CHD2-216ENST00000629104 LTBP3Q9NS15 1303 aa11.21□□□□□ -0.61
CHD2-216ENST00000629104 IPO8O15397 1037 aaKnown RBP11.21□□□□□ -0.61
CHD2-216ENST00000629104 CCT4P50991 539 aaKnown RBP11.21□□□□□ -0.61
CHD2-216ENST00000629104 PRELPP51888 382 aa11.21□□□□□ -0.61
CHD2-216ENST00000629104 CC2D2BQ6DHV5 1058 aa11.21□□□□□ -0.61
CHD2-216ENST00000629104 SLC51AQ86UW1 340 aa11.21□□□□□ -0.61
CHD2-216ENST00000629104 RTKN2Q8IZC4 609 aa11.21□□□□□ -0.61
CHD2-216ENST00000629104 TTLL11Q8NHH1 800 aa11.21□□□□□ -0.61
CHD2-216ENST00000629104 FRAT1Q92837 279 aaPredicted RBP11.21□□□□□ -0.61
CHD2-216ENST00000629104 CELF1Q92879 486 aaKnown RBP11.21□□□□□ -0.61
CHD2-216ENST00000629104 YTHDC1Q96MU7 727 aaKnown RBP11.21□□□□□ -0.61
CHD2-216ENST00000629104 CCDC85AQ96PX6 553 aaPredicted RBP11.21□□□□□ -0.61
CHD2-216ENST00000629104 TAOK3Q9H2K8 898 aa11.21□□□□□ -0.61
CHD2-216ENST00000629104 SEC31BQ9NQW1 1179 aa11.21□□□□□ -0.61
CHD2-216ENST00000629104 ATP6V0A2Q9Y487 856 aa11.21□□□□□ -0.61
CHD2-216ENST00000629104 RTL9Q8NET4 1388 aa11.2□□□□□ -0.62
CHD2-216ENST00000629104 CSF1RP07333 972 aa11.2□□□□□ -0.62
CHD2-216ENST00000629104 NBPF7P0C2Y1 421 aaPredicted RBP11.2□□□□□ -0.62
CHD2-216ENST00000629104 TRIM27P14373 513 aa11.2□□□□□ -0.62
CHD2-216ENST00000629104 LMNB1P20700 586 aa11.2□□□□□ -0.62
CHD2-216ENST00000629104 FOXO4P98177 505 aa11.2□□□□□ -0.62
CHD2-216ENST00000629104 GRIPAP1Q4V328 841 aa11.2□□□□□ -0.62
CHD2-216ENST00000629104 ATF7IPQ6VMQ6 1270 aa11.2□□□□□ -0.62
CHD2-216ENST00000629104 TMC4Q7Z404 712 aa11.2□□□□□ -0.62
CHD2-216ENST00000629104 SP8Q8IXZ3 490 aa11.2□□□□□ -0.62
CHD2-216ENST00000629104 LTBP1Q14766 1721 aa11.19□□□□□ -0.62
CHD2-216ENST00000629104 RPS8P62241 208 aaKnown RBP11.19□□□□□ -0.62
CHD2-216ENST00000629104 FKBP4Q02790 459 aaKnown RBP eCLIP11.19□□□□□ -0.62
CHD2-216ENST00000629104 C9orf131Q5VYM1 1079 aa11.19□□□□□ -0.62
CHD2-216ENST00000629104 ZKSCAN2Q63HK3 967 aa11.19□□□□□ -0.62
CHD2-216ENST00000629104 USP44Q9H0E7 712 aa11.19□□□□□ -0.62
CHD2-216ENST00000629104 TMX4Q9H1E5 349 aaPredicted RBP11.19□□□□□ -0.62
CHD2-216ENST00000629104 GREM2Q9H772 168 aa11.19□□□□□ -0.62
CHD2-216ENST00000629104 RNF181Q9P0P0 153 aa11.19□□□□□ -0.62
CHD2-216ENST00000629104 TNNQ9UQP3 1299 aa11.19□□□□□ -0.62
CHD2-216ENST00000629104 FAM161AQ3B820 660 aa11.18□□□□□ -0.62
CHD2-216ENST00000629104 EPHA10Q5JZY3 1008 aa11.18□□□□□ -0.62
CHD2-216ENST00000629104 INTS3Q68E01 1043 aaKnown RBP11.18□□□□□ -0.62
CHD2-216ENST00000629104 KAZALD1Q96I82 304 aa11.18□□□□□ -0.62
CHD2-216ENST00000629104 SUCLG2Q96I99 432 aa11.18□□□□□ -0.62
CHD2-216ENST00000629104 CDC5LQ99459 802 aaKnown RBP11.18□□□□□ -0.62
CHD2-216ENST00000629104 PSMD1Q99460 953 aa11.18□□□□□ -0.62
CHD2-216ENST00000629104 DUOX1Q9NRD9 1551 aa11.18□□□□□ -0.62
CHD2-216ENST00000629104 ITGA6P23229 1130 aa11.17□□□□□ -0.62
CHD2-216ENST00000629104 LMBR1LQ6UX01 489 aa11.17□□□□□ -0.62
CHD2-216ENST00000629104 ANKRD18AQ8IVF6 992 aa11.17□□□□□ -0.62
CHD2-216ENST00000629104 RCAN3Q9UKA8 241 aa11.17□□□□□ -0.62
CHD2-216ENST00000629104 A0A1B0GUL6 1792 aa11.17□□□□□ -0.62
CHD2-216ENST00000629104 ZC3H4Q9UPT8 1303 aaKnown RBP11.16□□□□□ -0.62
CHD2-216ENST00000629104 RABL6Q3YEC7 729 aaPredicted RBP11.16□□□□□ -0.62
CHD2-216ENST00000629104 DPP8Q6V1X1 898 aaPredicted RBP11.16□□□□□ -0.62
CHD2-216ENST00000629104 MPNDQ8N594 471 aa11.16□□□□□ -0.62
CHD2-216ENST00000629104 CLUAP1Q96AJ1 413 aa11.16□□□□□ -0.62
CHD2-216ENST00000629104 RTFDC1Q9BY42 306 aaPredicted RBP11.16□□□□□ -0.62
CHD2-216ENST00000629104 BICC1Q9H694 974 aaKnown RBP11.16□□□□□ -0.62
CHD2-216ENST00000629104 ZNF277Q9NRM2 450 aaPredicted RBP11.16□□□□□ -0.62
CHD2-216ENST00000629104 CHMP3Q9Y3E7 222 aa11.16□□□□□ -0.62
CHD2-216ENST00000629104 ANKRD18BA2A2Z9 1011 aa11.15□□□□□ -0.62
CHD2-216ENST00000629104 UBTFL1P0CB47 393 aaPredicted RBP11.15□□□□□ -0.62
CHD2-216ENST00000629104 IGHMBP2P38935 993 aaKnown RBP11.15□□□□□ -0.62
CHD2-216ENST00000629104 IARSP41252 1262 aaKnown RBP11.15□□□□□ -0.62
CHD2-216ENST00000629104 GPSM2P81274 684 aa11.15□□□□□ -0.62
CHD2-216ENST00000629104 IFIT5Q13325 482 aaKnown RBP11.15□□□□□ -0.62
CHD2-216ENST00000629104 TMEM57Q8N5G2 664 aa11.15□□□□□ -0.62
CHD2-216ENST00000629104 ANKRD44Q8N8A2 993 aa11.15□□□□□ -0.62
CHD2-216ENST00000629104 ZNF784Q8NCA9 323 aaPredicted RBP11.15□□□□□ -0.62
CHD2-216ENST00000629104 MEIS3Q99687 375 aa11.15□□□□□ -0.62
CHD2-216ENST00000629104 BSDC1Q9NW68 430 aaPredicted RBP11.15□□□□□ -0.62
CHD2-216ENST00000629104 COL4A5P29400 1685 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms