RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 SAMD15Q9P1V8 674 aa10.15□□□□□ -0.78
GABRB3-216ENST00000628124 RTEL1-TNFRSF6BF6WH68 1400 aa10.15□□□□□ -0.78
GABRB3-216ENST00000628124 PSMA7O14818 248 aa10.15□□□□□ -0.78
GABRB3-216ENST00000628124 ZNF165P49910 485 aa10.15□□□□□ -0.78
GABRB3-216ENST00000628124 PLCB3Q01970 1234 aa10.15□□□□□ -0.78
GABRB3-216ENST00000628124 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.15□□□□□ -0.78
GABRB3-216ENST00000628124 RSRC1Q96IZ7 334 aaKnown RBP10.15□□□□□ -0.78
GABRB3-216ENST00000628124 PFDN4Q9NQP4 134 aa10.15□□□□□ -0.78
GABRB3-216ENST00000628124 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.15□□□□□ -0.78
GABRB3-216ENST00000628124 TACC3Q9Y6A5 838 aa10.15□□□□□ -0.78
GABRB3-216ENST00000628124 SATB1Q01826 763 aa10.15□□□□□ -0.78
GABRB3-216ENST00000628124 CCDC85AQ96PX6 553 aaPredicted RBP10.15□□□□□ -0.78
GABRB3-216ENST00000628124 TEX13AQ9BXU3 409 aaPredicted RBP10.15□□□□□ -0.78
GABRB3-216ENST00000628124 CSRNP2Q9H175 543 aa10.15□□□□□ -0.78
GABRB3-216ENST00000628124 BOLA2Q9H3K6 86 aa10.15□□□□□ -0.78
GABRB3-216ENST00000628124 MRVI1Q9Y6F6 885 aa10.15□□□□□ -0.78
GABRB3-216ENST00000628124 EBAG9O00559 213 aa10.15□□□□□ -0.79
GABRB3-216ENST00000628124 NFE2L2Q16236 605 aa10.15□□□□□ -0.79
GABRB3-216ENST00000628124 ANKLE2Q86XL3 938 aa10.15□□□□□ -0.79
GABRB3-216ENST00000628124 EVI5LQ96CN4 794 aa10.15□□□□□ -0.79
GABRB3-216ENST00000628124 USP16Q9Y5T5 823 aa10.15□□□□□ -0.79
GABRB3-216ENST00000628124 POLA1P09884 1462 aaPredicted RBP10.15□□□□□ -0.79
GABRB3-216ENST00000628124 EEF2P13639 858 aaKnown RBP10.15□□□□□ -0.79
GABRB3-216ENST00000628124 MFSD6Q6ZSS7 791 aa10.15□□□□□ -0.79
GABRB3-216ENST00000628124 CDCA7LQ96GN5 454 aa10.15□□□□□ -0.79
GABRB3-216ENST00000628124 TRMT112Q9UI30 125 aaKnown RBP10.15□□□□□ -0.79
GABRB3-216ENST00000628124 HFM1A2PYH4 1435 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 KRT86O43790 486 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 CRCPO75575 148 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 INF2Q27J81 1249 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 CACNA2D3Q8IZS8 1091 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 RBM27Q9P2N5 1060 aaKnown RBP10.14□□□□□ -0.79
GABRB3-216ENST00000628124 MTUS1Q9ULD2 1270 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 C6orf229H3BNL8 230 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 CLUL1Q15846 466 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 NBPF1Q3BBV0 1214 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 NCOA7Q8NI08 942 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 VTI1AQ96AJ9 217 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 IFT74Q96LB3 600 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 CRNKL1Q9BZJ0 848 aaKnown RBP10.14□□□□□ -0.79
GABRB3-216ENST00000628124 ANKRD50Q9ULJ7 1429 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 METAP2P50579 478 aaKnown RBP eCLIP10.14□□□□□ -0.79
GABRB3-216ENST00000628124 VPS52Q8N1B4 723 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 C6orf50Q9HD87 102 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 ORC3Q9UBD5 711 aaPredicted RBP10.14□□□□□ -0.79
GABRB3-216ENST00000628124 FAM13AO94988 1023 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 GUCY1B3Q02153 619 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 CPLX4Q7Z7G2 160 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 SLC52A1Q9NWF4 448 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 EXOC6BQ9Y2D4 811 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 ATP6V0A2Q9Y487 856 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 CUX1P39880 1505 aa10.14□□□□□ -0.79
GABRB3-216ENST00000628124 STMN1P16949 149 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 CALCOCO2Q13137 446 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 ZGPATQ8N5A5 531 aaKnown RBP10.13□□□□□ -0.79
GABRB3-216ENST00000628124 SELENOSQ9BQE4 189 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 TCHPQ9BT92 498 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 HDAC9Q9UKV0 1011 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 GIPC1O14908 333 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 UQCRFS1P1P0C7P4 283 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 RRAGBQ5VZM2 374 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 CCDC89Q8N998 374 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 TRERF1Q96PN7 1200 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 HAUS2Q9NVX0 235 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 STAT6P42226 847 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 CFAP70Q5T0N1 1121 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 GPR161Q8N6U8 529 aaKnown RBP10.13□□□□□ -0.79
GABRB3-216ENST00000628124 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.13□□□□□ -0.79
GABRB3-216ENST00000628124 NUF2Q9BZD4 464 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 RSPH14Q9UHP6 348 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 ABCC8Q09428 1581 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 TTC36A6NLP5 189 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 RFC1P35251 1148 aaPredicted RBP10.13□□□□□ -0.79
GABRB3-216ENST00000628124 ALDH1L2Q3SY69 923 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 HS2ST1Q7LGA3 356 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 CCDC50Q8IVM0 306 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 MYD88Q99836 296 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 NKIRAS1Q9NYS0 192 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 CABP1Q9NZU7 370 aa10.13□□□□□ -0.79
GABRB3-216ENST00000628124 UBE2HP62256 183 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 DNAJC21Q5F1R6 531 aaKnown RBP10.12□□□□□ -0.79
GABRB3-216ENST00000628124 KRT23Q9C075 422 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 VCXQ9H320 206 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 TMX1Q9H3N1 280 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 VAV2P52735 878 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 UBASH3AP57075 661 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 TNNC1P63316 161 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 INTS8Q75QN2 995 aaKnown RBP10.12□□□□□ -0.79
GABRB3-216ENST00000628124 C10orf67Q8IYJ2 551 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 KCNG4Q8TDN1 519 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 HAUS7Q99871 368 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 MMRN2Q9H8L6 949 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 BICDL2A1A5D9 508 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 CTAGE9A4FU28 777 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 BIN1O00499 593 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 MGEA5O60502 916 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 SYKP43405 635 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 SH2D4BQ5SQS7 431 aa10.12□□□□□ -0.79
GABRB3-216ENST00000628124 SEC62Q99442 399 aaKnown RBP10.12□□□□□ -0.79
GABRB3-216ENST00000628124 DHX29Q7Z478 1369 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms