RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 CLASRPQ8N2M8 674 aaKnown RBP9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 LRRC4BQ9NT99 713 aa9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 STAP2Q9UGK3 403 aa9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 FBXO3Q9UK99 471 aa9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 PA2G4Q9UQ80 394 aaKnown RBP9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 NIP7Q9Y221 180 aaKnown RBP eCLIP9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 CHMP3Q9Y3E7 222 aa9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 EP400Q96L91 3159 aa9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 SH3TC1Q8TE82 1336 aa9.28□□□□□ -0.92
PTP4A1-206ENST00000627002 KAT6BQ8WYB5 2073 aa9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 EIF5BO60841 1220 aaKnown RBP9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 MX1P20591 662 aa9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 SSFA2P28290 1259 aa9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 RFC4P35249 363 aa9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 PDE1AP54750 535 aa9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 CTSWP56202 376 aa9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 TXNRD1Q16881 649 aa9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 CCDC57Q2TAC2 916 aa9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 TTC22Q5TAA0 569 aa9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 SUSD4Q5VX71 490 aa9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 ARHGEF1Q92888 912 aaKnown RBP9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 GPATCH3Q96I76 525 aa9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 NYXQ9GZU5 481 aa9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 RBM19Q9Y4C8 960 aaKnown RBP9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 C4BP0C0L5 1744 aa9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 SALL3Q9BXA9 1300 aa9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 USP42Q9H9J4 1324 aaKnown RBP9.27□□□□□ -0.93
PTP4A1-206ENST00000627002 CIAO1O76071 339 aa9.26□□□□□ -0.93
PTP4A1-206ENST00000627002 NTSR2O95665 410 aa9.26□□□□□ -0.93
PTP4A1-206ENST00000627002 IFIT2P09913 472 aaKnown RBP9.26□□□□□ -0.93
PTP4A1-206ENST00000627002 IFIT5Q13325 482 aaKnown RBP9.26□□□□□ -0.93
PTP4A1-206ENST00000627002 EZH2Q15910 746 aaKnown RBP9.26□□□□□ -0.93
PTP4A1-206ENST00000627002 USPL1Q5W0Q7 1092 aa9.26□□□□□ -0.93
PTP4A1-206ENST00000627002 OTUD7AQ8TE49 926 aaPredicted RBP9.26□□□□□ -0.93
PTP4A1-206ENST00000627002 SETDB2Q96T68 719 aa9.26□□□□□ -0.93
PTP4A1-206ENST00000627002 BCL11AQ9H165 835 aa9.26□□□□□ -0.93
PTP4A1-206ENST00000627002 SIL1Q9H173 461 aa9.26□□□□□ -0.93
PTP4A1-206ENST00000627002 IL1RAPL2Q9NP60 686 aa9.26□□□□□ -0.93
PTP4A1-206ENST00000627002 PPP1R1BQ9UD71 204 aaPredicted RBP9.26□□□□□ -0.93
PTP4A1-206ENST00000627002 ANKRD36CQ5JPF3 1778 aa9.26□□□□□ -0.93
PTP4A1-206ENST00000627002 TTC41PQ6P2S7 1318 aa9.26□□□□□ -0.93
PTP4A1-206ENST00000627002 SCN7AQ01118 1682 aa9.26□□□□□ -0.93
PTP4A1-206ENST00000627002 BCORQ6W2J9 1755 aa9.25□□□□□ -0.93
PTP4A1-206ENST00000627002 ANKRD18BA2A2Z9 1011 aa9.25□□□□□ -0.93
PTP4A1-206ENST00000627002 PHF14O94880 888 aa9.25□□□□□ -0.93
PTP4A1-206ENST00000627002 SASH1O94885 1247 aa9.25□□□□□ -0.93
PTP4A1-206ENST00000627002 PRR29P0C7W0 189 aa9.25□□□□□ -0.93
PTP4A1-206ENST00000627002 GSPT1P15170 499 aaKnown RBP9.25□□□□□ -0.93
PTP4A1-206ENST00000627002 IL15P40933 162 aaPredicted RBP9.25□□□□□ -0.93
PTP4A1-206ENST00000627002 TAF7LQ5H9L4 462 aa9.25□□□□□ -0.93
PTP4A1-206ENST00000627002 TBC1D9BQ66K14 1250 aa9.25□□□□□ -0.93
PTP4A1-206ENST00000627002 TTLL11Q8NHH1 800 aa9.25□□□□□ -0.93
PTP4A1-206ENST00000627002 KLHDC4Q8TBB5 520 aa9.25□□□□□ -0.93
PTP4A1-206ENST00000627002 SP7Q8TDD2 431 aaPredicted RBP9.25□□□□□ -0.93
PTP4A1-206ENST00000627002 BCL2L12Q9HB09 334 aa9.25□□□□□ -0.93
PTP4A1-206ENST00000627002 MYH14Q7Z406 1995 aaKnown RBP9.24□□□□□ -0.93
PTP4A1-206ENST00000627002 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.24□□□□□ -0.93
PTP4A1-206ENST00000627002 EYA2O00167 538 aa9.24□□□□□ -0.93
PTP4A1-206ENST00000627002 ERC2O15083 957 aa9.24□□□□□ -0.93
PTP4A1-206ENST00000627002 CDC45O75419 566 aa9.24□□□□□ -0.93
PTP4A1-206ENST00000627002 CCDC152Q4G0S7 254 aa9.24□□□□□ -0.93
PTP4A1-206ENST00000627002 CASC1Q6TDU7 716 aa9.24□□□□□ -0.93
PTP4A1-206ENST00000627002 AACSQ86V21 672 aa9.24□□□□□ -0.93
PTP4A1-206ENST00000627002 SYNE4Q8N205 404 aa9.24□□□□□ -0.93
PTP4A1-206ENST00000627002 PROM2Q8N271 834 aa9.24□□□□□ -0.93
PTP4A1-206ENST00000627002 FLAD1Q8NFF5 587 aa9.24□□□□□ -0.93
PTP4A1-206ENST00000627002 CAMKK2Q96RR4 588 aa9.24□□□□□ -0.93
PTP4A1-206ENST00000627002 UPF2Q9HAU5 1272 aaKnown RBP9.24□□□□□ -0.93
PTP4A1-206ENST00000627002 GPR108Q9NPR9 543 aa9.24□□□□□ -0.93
PTP4A1-206ENST00000627002 SRP68Q9UHB9 627 aaKnown RBP9.24□□□□□ -0.93
PTP4A1-206ENST00000627002 RTL9Q8NET4 1388 aa9.24□□□□□ -0.93
PTP4A1-206ENST00000627002 FAM177BA6PVY3 158 aa9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 HAX1O00165 279 aa9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 GLRX3O76003 335 aaKnown RBP9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 HCLS1P14317 486 aaPredicted RBP9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 ITGA6P23229 1130 aa9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 GTF2E1P29083 439 aaPredicted RBP9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 TFCP2Q12800 502 aa9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 SLC10A5Q5PT55 438 aa9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 TPTE2Q6XPS3 522 aa9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 BICDL1Q6ZP65 573 aa9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 ATG9AQ7Z3C6 839 aa9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 AMIGO3Q86WK7 504 aa9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 NBPF5PQ86XG9 351 aaPredicted RBP9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 NUTM1Q86Y26 1132 aa9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 GREM2Q9H772 168 aa9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 SPON1Q9HCB6 807 aa9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 ECHDC1Q9NTX5 307 aa9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 AKAP2Q9Y2D5 859 aa9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 NUP98P52948 1817 aa9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 TAF1LQ8IZX4 1826 aa9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 CARMIL3Q8ND23 1372 aa9.23□□□□□ -0.93
PTP4A1-206ENST00000627002 SDSP20132 328 aa9.22□□□□□ -0.93
PTP4A1-206ENST00000627002 ERFEQ4G0M1 354 aa9.22□□□□□ -0.93
PTP4A1-206ENST00000627002 TNNI3KQ59H18 835 aa9.22□□□□□ -0.93
PTP4A1-206ENST00000627002 LDHAL6AQ6ZMR3 332 aa9.22□□□□□ -0.93
PTP4A1-206ENST00000627002 SMIM5Q71RC9 77 aa9.22□□□□□ -0.93
PTP4A1-206ENST00000627002 EAF2Q96CJ1 260 aaPredicted RBP9.22□□□□□ -0.93
PTP4A1-206ENST00000627002 ZNF594Q96JF6 807 aaPredicted RBP9.22□□□□□ -0.93
PTP4A1-206ENST00000627002 TFCP2L1Q9NZI6 479 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms