RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 IL1RAPL2Q9NP60 686 aa12.79□□□□□ -0.36
VPS8-227ENST00000625842 NOP56O00567 594 aaKnown RBP12.79□□□□□ -0.36
VPS8-227ENST00000625842 JAKMIP1Q96N16 626 aaKnown RBP12.79□□□□□ -0.36
VPS8-227ENST00000625842 VAT1LQ9HCJ6 419 aa12.79□□□□□ -0.36
VPS8-227ENST00000625842 BACH1O14867 736 aa12.79□□□□□ -0.36
VPS8-227ENST00000625842 CTNNA2P26232 953 aa12.79□□□□□ -0.36
VPS8-227ENST00000625842 CWC27Q6UX04 472 aaKnown RBP12.79□□□□□ -0.36
VPS8-227ENST00000625842 GOLGA6L10A6NI86 522 aa12.78□□□□□ -0.36
VPS8-227ENST00000625842 IP6K1Q92551 441 aa12.78□□□□□ -0.36
VPS8-227ENST00000625842 EVI5LQ96CN4 794 aa12.78□□□□□ -0.36
VPS8-227ENST00000625842 ZEB2O60315 1214 aa12.78□□□□□ -0.36
VPS8-227ENST00000625842 BCAR3O75815 825 aa12.78□□□□□ -0.36
VPS8-227ENST00000625842 CASTP20810 708 aaKnown RBP12.78□□□□□ -0.36
VPS8-227ENST00000625842 CDC37L1Q7L3B6 337 aa12.78□□□□□ -0.36
VPS8-227ENST00000625842 BOLA2Q9H3K6 86 aa12.78□□□□□ -0.36
VPS8-227ENST00000625842 SMTNL1A8MU46 457 aa12.78□□□□□ -0.36
VPS8-227ENST00000625842 FAM200AQ8TCP9 573 aa12.78□□□□□ -0.36
VPS8-227ENST00000625842 TRIM5Q9C035 493 aa12.78□□□□□ -0.36
VPS8-227ENST00000625842 RAD50Q92878 1312 aa12.78□□□□□ -0.36
VPS8-227ENST00000625842 UBA7P41226 1012 aa12.78□□□□□ -0.36
VPS8-227ENST00000625842 EXOC6Q8TAG9 804 aa12.78□□□□□ -0.36
VPS8-227ENST00000625842 ADGRF5Q8IZF2 1346 aa12.77□□□□□ -0.36
VPS8-227ENST00000625842 MRPS9P82933 396 aaKnown RBP12.77□□□□□ -0.36
VPS8-227ENST00000625842 TMEM67Q5HYA8 995 aa12.77□□□□□ -0.36
VPS8-227ENST00000625842 NCOA7Q8NI08 942 aa12.77□□□□□ -0.36
VPS8-227ENST00000625842 KRT13P13646 458 aa12.77□□□□□ -0.37
VPS8-227ENST00000625842 MX1P20591 662 aa12.77□□□□□ -0.37
VPS8-227ENST00000625842 HOXD10P28358 340 aa12.77□□□□□ -0.37
VPS8-227ENST00000625842 STK3Q13188 491 aa12.77□□□□□ -0.37
VPS8-227ENST00000625842 TEX35Q5T0J7 233 aa12.77□□□□□ -0.37
VPS8-227ENST00000625842 ZNF354CQ86Y25 554 aa12.77□□□□□ -0.37
VPS8-227ENST00000625842 XAGE3Q8WTP9 111 aa12.77□□□□□ -0.37
VPS8-227ENST00000625842 SYNCQ9H7C4 482 aa12.77□□□□□ -0.37
VPS8-227ENST00000625842 ECHDC1Q9NTX5 307 aa12.77□□□□□ -0.37
VPS8-227ENST00000625842 ABCC5O15440 1437 aa12.77□□□□□ -0.37
VPS8-227ENST00000625842 SLU7O95391 586 aaKnown RBP12.77□□□□□ -0.37
VPS8-227ENST00000625842 DNM2P50570 870 aa12.77□□□□□ -0.37
VPS8-227ENST00000625842 SNX16P57768 344 aa12.77□□□□□ -0.37
VPS8-227ENST00000625842 C2CD5Q86YS7 1000 aa12.77□□□□□ -0.37
VPS8-227ENST00000625842 ZNF608Q9ULD9 1512 aaPredicted RBP12.77□□□□□ -0.37
VPS8-227ENST00000625842 CDK13Q14004 1512 aaKnown RBP12.76□□□□□ -0.37
VPS8-227ENST00000625842 KMT5BQ4FZB7 885 aa12.76□□□□□ -0.37
VPS8-227ENST00000625842 COPS6Q7L5N1 327 aa12.76□□□□□ -0.37
VPS8-227ENST00000625842 FAM114A1Q8IWE2 563 aa12.76□□□□□ -0.37
VPS8-227ENST00000625842 MAGEB6P1A0A0J9YX57 407 aa12.76□□□□□ -0.37
VPS8-227ENST00000625842 RBM6P78332 1123 aaKnown RBP12.76□□□□□ -0.37
VPS8-227ENST00000625842 CACNA2D4Q7Z3S7 1137 aa12.76□□□□□ -0.37
VPS8-227ENST00000625842 ZNF592Q92610 1267 aa12.76□□□□□ -0.37
VPS8-227ENST00000625842 AZI2Q9H6S1 392 aa12.76□□□□□ -0.37
VPS8-227ENST00000625842 MIS18AQ9NYP9 233 aa12.76□□□□□ -0.37
VPS8-227ENST00000625842 SCAF11Q99590 1463 aaKnown RBP12.76□□□□□ -0.37
VPS8-227ENST00000625842 IARSP41252 1262 aaKnown RBP12.76□□□□□ -0.37
VPS8-227ENST00000625842 CDAN1Q8IWY9 1227 aa12.76□□□□□ -0.37
VPS8-227ENST00000625842 C8orf76Q96K31 380 aa12.76□□□□□ -0.37
VPS8-227ENST00000625842 TSNARE1Q96NA8 513 aa12.76□□□□□ -0.37
VPS8-227ENST00000625842 SH2B1Q9NRF2 756 aaPredicted RBP12.76□□□□□ -0.37
VPS8-227ENST00000625842 STK24Q9Y6E0 443 aa12.76□□□□□ -0.37
VPS8-227ENST00000625842 CCDC91Q7Z6B0 441 aa12.76□□□□□ -0.37
VPS8-227ENST00000625842 PLVAPQ9BX97 442 aa12.76□□□□□ -0.37
VPS8-227ENST00000625842 RNF216Q9NWF9 866 aaPredicted RBP12.76□□□□□ -0.37
VPS8-227ENST00000625842 CALML3P27482 149 aa12.75□□□□□ -0.37
VPS8-227ENST00000625842 KSR2Q6VAB6 950 aa12.75□□□□□ -0.37
VPS8-227ENST00000625842 DDX12PQ92771 950 aa12.75□□□□□ -0.37
VPS8-227ENST00000625842 RRP36Q96EU6 259 aaKnown RBP12.75□□□□□ -0.37
VPS8-227ENST00000625842 SPON1Q9HCB6 807 aa12.75□□□□□ -0.37
VPS8-227ENST00000625842 HIBADHP31937 336 aaKnown RBP12.75□□□□□ -0.37
VPS8-227ENST00000625842 ABCC2Q92887 1545 aa12.75□□□□□ -0.37
VPS8-227ENST00000625842 STAMBPO95630 424 aa12.74□□□□□ -0.37
VPS8-227ENST00000625842 GNA11P29992 359 aa12.74□□□□□ -0.37
VPS8-227ENST00000625842 WTAPQ15007 396 aa12.74□□□□□ -0.37
VPS8-227ENST00000625842 MTIF3Q9H2K0 278 aaKnown RBP12.74□□□□□ -0.37
VPS8-227ENST00000625842 IFIT1BQ5T764 474 aaKnown RBP12.74□□□□□ -0.37
VPS8-227ENST00000625842 TEX11Q8IYF3 940 aa12.74□□□□□ -0.37
VPS8-227ENST00000625842 GOLGA1Q92805 767 aa12.74□□□□□ -0.37
VPS8-227ENST00000625842 HMG20BQ9P0W2 317 aa12.74□□□□□ -0.37
VPS8-227ENST00000625842 YTHDC2Q9H6S0 1430 aaKnown RBP12.74□□□□□ -0.37
VPS8-227ENST00000625842 PI4KAP2A4QPH2 592 aa12.74□□□□□ -0.37
VPS8-227ENST00000625842 PI4KAP1Q8N8J0 262 aa12.74□□□□□ -0.37
VPS8-227ENST00000625842 IPO9Q96P70 1041 aaKnown RBP12.74□□□□□ -0.37
VPS8-227ENST00000625842 C1orf115Q9H7X2 142 aa12.74□□□□□ -0.37
VPS8-227ENST00000625842 SLC4A4Q9Y6R1 1079 aa12.74□□□□□ -0.37
VPS8-227ENST00000625842 NFATC2IPQ8NCF5 419 aa12.74□□□□□ -0.37
VPS8-227ENST00000625842 C2orf69Q8N8R5 385 aa12.73□□□□□ -0.37
VPS8-227ENST00000625842 GOLIM4O00461 696 aa12.73□□□□□ -0.37
VPS8-227ENST00000625842 KANK3Q6NY19 840 aa12.73□□□□□ -0.37
VPS8-227ENST00000625842 CCDC191Q8NCU4 936 aa12.73□□□□□ -0.37
VPS8-227ENST00000625842 TMEM106CQ9BVX2 250 aa12.73□□□□□ -0.37
VPS8-227ENST00000625842 CEP83Q9Y592 693 aa12.73□□□□□ -0.37
VPS8-227ENST00000625842 PTPRKQ15262 1439 aa12.73□□□□□ -0.37
VPS8-227ENST00000625842 DUOX2Q9NRD8 1548 aa12.73□□□□□ -0.37
VPS8-227ENST00000625842 UQCRHP07919 91 aa12.73□□□□□ -0.37
VPS8-227ENST00000625842 PDE4AP27815 886 aa12.73□□□□□ -0.37
VPS8-227ENST00000625842 PRIM1P49642 420 aaKnown RBP12.73□□□□□ -0.37
VPS8-227ENST00000625842 SPA17Q15506 151 aa12.73□□□□□ -0.37
VPS8-227ENST00000625842 DALRD3Q5D0E6 543 aaKnown RBP12.73□□□□□ -0.37
VPS8-227ENST00000625842 LINS1Q8NG48 757 aa12.73□□□□□ -0.37
VPS8-227ENST00000625842 TRIM6Q9C030 488 aaPredicted RBP12.73□□□□□ -0.37
VPS8-227ENST00000625842 GOPCQ9HD26 462 aa12.73□□□□□ -0.37
VPS8-227ENST00000625842 MCM9Q9NXL9 1143 aa12.73□□□□□ -0.37
VPS8-227ENST00000625842 OSBPP22059 807 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms