RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 ASAP1Q9ULH1 1129 aa7.18□□□□□ -1.26
EBF1-211ENST00000622875 PRPF40BQ6NWY9 871 aaKnown RBP7.18□□□□□ -1.26
EBF1-211ENST00000622875 CABP1Q9NZU7 370 aa7.18□□□□□ -1.26
EBF1-211ENST00000622875 SUPT16HQ9Y5B9 1047 aaKnown RBP7.18□□□□□ -1.26
EBF1-211ENST00000622875 TBC1D8O95759 1140 aa7.17□□□□□ -1.26
EBF1-211ENST00000622875 FAM43AQ8N2R8 423 aa7.17□□□□□ -1.26
EBF1-211ENST00000622875 C2orf69Q8N8R5 385 aa7.17□□□□□ -1.26
EBF1-211ENST00000622875 CEP290O15078 2479 aa7.17□□□□□ -1.26
EBF1-211ENST00000622875 EIF6P56537 245 aaKnown RBP7.17□□□□□ -1.26
EBF1-211ENST00000622875 FKBP1BP68106 108 aa7.17□□□□□ -1.26
EBF1-211ENST00000622875 SHISA4Q96DD7 197 aa7.17□□□□□ -1.26
EBF1-211ENST00000622875 POLR2AP24928 1970 aaKnown RBP7.17□□□□□ -1.26
EBF1-211ENST00000622875 KIAA0100Q14667 2235 aaKnown RBP7.16□□□□□ -1.26
EBF1-211ENST00000622875 TATP17735 454 aaPredicted RBP7.16□□□□□ -1.26
EBF1-211ENST00000622875 MRE11P49959 708 aa7.16□□□□□ -1.26
EBF1-211ENST00000622875 TSPYL1Q9H0U9 437 aa7.16□□□□□ -1.26
EBF1-211ENST00000622875 A0A1W2PP64 1363 aa7.16□□□□□ -1.26
EBF1-211ENST00000622875 TNNT3P45378 269 aaPredicted RBP7.16□□□□□ -1.26
EBF1-211ENST00000622875 PUS7Q96PZ0 661 aaKnown RBP7.16□□□□□ -1.26
EBF1-211ENST00000622875 TMOD3Q9NYL9 352 aa7.16□□□□□ -1.26
EBF1-211ENST00000622875 NARFQ9UHQ1 456 aa7.16□□□□□ -1.26
EBF1-211ENST00000622875 SOS1Q07889 1333 aaPredicted RBP7.16□□□□□ -1.26
EBF1-211ENST00000622875 OS9Q13438 667 aaPredicted RBP7.15□□□□□ -1.26
EBF1-211ENST00000622875 MAFAQ8NHW3 353 aaPredicted RBP7.15□□□□□ -1.26
EBF1-211ENST00000622875 DDRGK1Q96HY6 314 aa7.15□□□□□ -1.26
EBF1-211ENST00000622875 TRIM17Q9Y577 477 aa7.15□□□□□ -1.26
EBF1-211ENST00000622875 PIEZO1Q92508 2521 aa7.15□□□□□ -1.26
EBF1-211ENST00000622875 TPM2P07951 284 aa7.15□□□□□ -1.26
EBF1-211ENST00000622875 SRGNP10124 158 aa7.15□□□□□ -1.26
EBF1-211ENST00000622875 MASTLQ96GX5 879 aa7.15□□□□□ -1.26
EBF1-211ENST00000622875 ERO1AQ96HE7 468 aa7.15□□□□□ -1.26
EBF1-211ENST00000622875 DDX60Q8IY21 1712 aaKnown RBP7.15□□□□□ -1.26
EBF1-211ENST00000622875 GRIPAP1Q4V328 841 aa7.15□□□□□ -1.27
EBF1-211ENST00000622875 DPF3Q92784 378 aa7.15□□□□□ -1.27
EBF1-211ENST00000622875 ZNF277Q9NRM2 450 aaPredicted RBP7.15□□□□□ -1.27
EBF1-211ENST00000622875 SBNO2Q9Y2G9 1366 aa7.14□□□□□ -1.27
EBF1-211ENST00000622875 RAPGEF4Q8WZA2 1011 aa7.14□□□□□ -1.27
EBF1-211ENST00000622875 BCL2L12Q9HB09 334 aa7.14□□□□□ -1.27
EBF1-211ENST00000622875 RANBP2P49792 3224 aaKnown RBP7.14□□□□□ -1.27
EBF1-211ENST00000622875 ALDH1A1P00352 501 aa7.14□□□□□ -1.27
EBF1-211ENST00000622875 CALD1Q05682 793 aaKnown RBP7.14□□□□□ -1.27
EBF1-211ENST00000622875 ZNF592Q92610 1267 aa7.14□□□□□ -1.27
EBF1-211ENST00000622875 VPS33BQ9H267 617 aa7.14□□□□□ -1.27
EBF1-211ENST00000622875 CRKLP46109 303 aaKnown RBP7.14□□□□□ -1.27
EBF1-211ENST00000622875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.14□□□□□ -1.27
EBF1-211ENST00000622875 KLRG2A4D1S0 409 aaPredicted RBP7.13□□□□□ -1.27
EBF1-211ENST00000622875 GOLGA6L3A6NEY3 463 aa7.13□□□□□ -1.27
EBF1-211ENST00000622875 NBPF11Q86T75 865 aa7.13□□□□□ -1.27
EBF1-211ENST00000622875 GPATCH11Q8N954 259 aa7.13□□□□□ -1.27
EBF1-211ENST00000622875 KCNH6Q9H252 994 aa7.13□□□□□ -1.27
EBF1-211ENST00000622875 KTN1Q86UP2 1357 aaKnown RBP7.13□□□□□ -1.27
EBF1-211ENST00000622875 ANP32CO43423 234 aa7.13□□□□□ -1.27
EBF1-211ENST00000622875 HOXC9P31274 260 aa7.13□□□□□ -1.27
EBF1-211ENST00000622875 USPL1Q5W0Q7 1092 aa7.13□□□□□ -1.27
EBF1-211ENST00000622875 INTS5Q6P9B9 1019 aaKnown RBP7.13□□□□□ -1.27
EBF1-211ENST00000622875 NKX2-3Q8TAU0 364 aa7.13□□□□□ -1.27
EBF1-211ENST00000622875 COL3A1P02461 1466 aaPredicted RBP7.13□□□□□ -1.27
EBF1-211ENST00000622875 SOX12O15370 315 aa7.13□□□□□ -1.27
EBF1-211ENST00000622875 BCAMP50895 628 aa7.13□□□□□ -1.27
EBF1-211ENST00000622875 SREBF2Q12772 1141 aa7.13□□□□□ -1.27
EBF1-211ENST00000622875 TDHQ8IZJ6 230 aa7.13□□□□□ -1.27
EBF1-211ENST00000622875 RBM28Q9NW13 759 aaKnown RBP7.13□□□□□ -1.27
EBF1-211ENST00000622875 ZPR1O75312 459 aa7.12□□□□□ -1.27
EBF1-211ENST00000622875 EDC4Q6P2E9 1401 aaKnown RBP7.12□□□□□ -1.27
EBF1-211ENST00000622875 KIF24Q5T7B8 1368 aa7.12□□□□□ -1.27
EBF1-211ENST00000622875 KIF7Q2M1P5 1343 aa7.12□□□□□ -1.27
EBF1-211ENST00000622875 HIRAP54198 1017 aaPredicted RBP7.12□□□□□ -1.27
EBF1-211ENST00000622875 MAP3K11Q16584 847 aa7.12□□□□□ -1.27
EBF1-211ENST00000622875 JDP2Q8WYK2 163 aa7.12□□□□□ -1.27
EBF1-211ENST00000622875 LRFN3Q9BTN0 628 aa7.12□□□□□ -1.27
EBF1-211ENST00000622875 ZNF408Q9H9D4 720 aa7.12□□□□□ -1.27
EBF1-211ENST00000622875 UBR2Q8IWV8 1755 aa7.12□□□□□ -1.27
EBF1-211ENST00000622875 CASC1Q6TDU7 716 aa7.11□□□□□ -1.27
EBF1-211ENST00000622875 NBPF6Q5VWK0 638 aa7.11□□□□□ -1.27
EBF1-211ENST00000622875 NBPF4Q96M43 638 aa7.11□□□□□ -1.27
EBF1-211ENST00000622875 STAP2Q9UGK3 403 aa7.11□□□□□ -1.27
EBF1-211ENST00000622875 RAB3GAP2Q9H2M9 1393 aa7.11□□□□□ -1.27
EBF1-211ENST00000622875 COL15A1P39059 1388 aa7.11□□□□□ -1.27
EBF1-211ENST00000622875 CC2D2BQ6DHV5 1058 aa7.11□□□□□ -1.27
EBF1-211ENST00000622875 ATXN2LQ8WWM7 1075 aaKnown RBP7.11□□□□□ -1.27
EBF1-211ENST00000622875 FAM205AQ6ZU69 1335 aa7.1□□□□□ -1.27
EBF1-211ENST00000622875 PRR5LQ6MZQ0 368 aa7.1□□□□□ -1.27
EBF1-211ENST00000622875 GJA3Q9Y6H8 435 aa7.1□□□□□ -1.27
EBF1-211ENST00000622875 WTIPA6NIX2 430 aaPredicted RBP7.1□□□□□ -1.27
EBF1-211ENST00000622875 USP48Q86UV5 1035 aa7.1□□□□□ -1.27
EBF1-211ENST00000622875 R3HDMLQ9H3Y0 253 aa7.1□□□□□ -1.27
EBF1-211ENST00000622875 ERVV-2B6SEH9 535 aa7.1□□□□□ -1.27
EBF1-211ENST00000622875 TAF1P21675 1872 aa7.1□□□□□ -1.27
EBF1-211ENST00000622875 KMT2BQ9UMN6 2715 aaPredicted RBP7.09□□□□□ -1.27
EBF1-211ENST00000622875 TTC28Q96AY4 2481 aa7.09□□□□□ -1.27
EBF1-211ENST00000622875 GOLGA6L6A8MZA4 724 aa7.09□□□□□ -1.27
EBF1-211ENST00000622875 GOLGA6L22H0YM25 854 aa7.09□□□□□ -1.27
EBF1-211ENST00000622875 SLC4A8Q2Y0W8 1093 aa7.09□□□□□ -1.27
EBF1-211ENST00000622875 CNPY4Q8N129 248 aa7.09□□□□□ -1.27
EBF1-211ENST00000622875 NRDCO43847 1150 aa7.09□□□□□ -1.27
EBF1-211ENST00000622875 GPR37L1O60883 481 aa7.09□□□□□ -1.27
EBF1-211ENST00000622875 NPR1P16066 1061 aa7.09□□□□□ -1.27
EBF1-211ENST00000622875 PDCL3Q9H2J4 239 aa7.09□□□□□ -1.27
EBF1-211ENST00000622875 WASHC2AQ641Q2 1341 aa7.09□□□□□ -1.27
EBF1-211ENST00000622875 IRS2Q9Y4H2 1338 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms