RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 CCDC146Q8IYE0 955 aa14.38□□□□□ -0.11
LINC00963-214ENST00000622680 PDE4DIPQ5VU43 2346 aa14.37□□□□□ -0.11
LINC00963-214ENST00000622680 SHTN1A0MZ66 631 aa14.37□□□□□ -0.11
LINC00963-214ENST00000622680 NEUROD2Q15784 382 aa14.37□□□□□ -0.11
LINC00963-214ENST00000622680 DPP8Q6V1X1 898 aaPredicted RBP14.37□□□□□ -0.11
LINC00963-214ENST00000622680 RTFDC1Q9BY42 306 aaPredicted RBP14.37□□□□□ -0.11
LINC00963-214ENST00000622680 GLIS2Q9BZE0 524 aaPredicted RBP14.37□□□□□ -0.11
LINC00963-214ENST00000622680 TMX4Q9H1E5 349 aaPredicted RBP14.37□□□□□ -0.11
LINC00963-214ENST00000622680 ADARB2Q9NS39 739 aaKnown RBP14.37□□□□□ -0.11
LINC00963-214ENST00000622680 TRMT112Q9UI30 125 aaKnown RBP14.37□□□□□ -0.11
LINC00963-214ENST00000622680 TSKSQ9UJT2 592 aa14.37□□□□□ -0.11
LINC00963-214ENST00000622680 ZNRF3Q9ULT6 936 aa14.37□□□□□ -0.11
LINC00963-214ENST00000622680 AOC2O75106 756 aa14.36□□□□□ -0.11
LINC00963-214ENST00000622680 RAD17O75943 681 aa14.36□□□□□ -0.11
LINC00963-214ENST00000622680 MAP2K1Q02750 393 aaPredicted RBP14.36□□□□□ -0.11
LINC00963-214ENST00000622680 MPNDQ8N594 471 aa14.36□□□□□ -0.11
LINC00963-214ENST00000622680 CHPF2Q9P2E5 772 aa14.36□□□□□ -0.11
LINC00963-214ENST00000622680 TLL2Q9Y6L7 1015 aa14.36□□□□□ -0.11
LINC00963-214ENST00000622680 A0A1B0GUL6 1792 aa14.36□□□□□ -0.11
LINC00963-214ENST00000622680 SH3TC1Q8TE82 1336 aa14.36□□□□□ -0.11
LINC00963-214ENST00000622680 CACNA1FO60840 1977 aa14.35□□□□□ -0.11
LINC00963-214ENST00000622680 YDJCA8MPS7 323 aa14.35□□□□□ -0.11
LINC00963-214ENST00000622680 LMOD3Q0VAK6 560 aa14.35□□□□□ -0.11
LINC00963-214ENST00000622680 KIAA2012Q0VF49 1180 aa14.35□□□□□ -0.11
LINC00963-214ENST00000622680 TCIRG1Q13488 830 aa14.35□□□□□ -0.11
LINC00963-214ENST00000622680 HSP90AB3PQ58FF7 597 aa14.35□□□□□ -0.11
LINC00963-214ENST00000622680 CIAPIN1Q6FI81 312 aa14.35□□□□□ -0.11
LINC00963-214ENST00000622680 SP8Q8IXZ3 490 aa14.35□□□□□ -0.11
LINC00963-214ENST00000622680 SUPT20HQ8NEM7 779 aa14.35□□□□□ -0.11
LINC00963-214ENST00000622680 TRPM4Q8TD43 1214 aa14.35□□□□□ -0.11
LINC00963-214ENST00000622680 GPR101Q96P66 508 aaPredicted RBP14.35□□□□□ -0.11
LINC00963-214ENST00000622680 LAS1LQ9Y4W2 734 aaKnown RBP14.35□□□□□ -0.11
LINC00963-214ENST00000622680 CELF2O95319 508 aaKnown RBP14.34□□□□□ -0.11
LINC00963-214ENST00000622680 ECE1P42892 770 aa14.34□□□□□ -0.11
LINC00963-214ENST00000622680 GRAPQ13588 217 aa14.34□□□□□ -0.11
LINC00963-214ENST00000622680 DDX46Q7L014 1031 aaKnown RBP14.34□□□□□ -0.11
LINC00963-214ENST00000622680 GRAPLQ8TC17 118 aaPredicted RBP14.34□□□□□ -0.11
LINC00963-214ENST00000622680 ABHD8Q96I13 439 aa14.34□□□□□ -0.11
LINC00963-214ENST00000622680 BCL2L13Q9BXK5 485 aa14.34□□□□□ -0.11
LINC00963-214ENST00000622680 ZNF408Q9H9D4 720 aa14.34□□□□□ -0.11
LINC00963-214ENST00000622680 BABAM1Q9NWV8 329 aa14.34□□□□□ -0.11
LINC00963-214ENST00000622680 BBOX1O75936 387 aa14.33□□□□□ -0.12
LINC00963-214ENST00000622680 HIRAP54198 1017 aaPredicted RBP14.33□□□□□ -0.12
LINC00963-214ENST00000622680 VPS33BQ9H267 617 aa14.33□□□□□ -0.12
LINC00963-214ENST00000622680 CDHR2Q9BYE9 1310 aa14.33□□□□□ -0.12
LINC00963-214ENST00000622680 ECM29Q5VYK3 1845 aa14.32□□□□□ -0.12
LINC00963-214ENST00000622680 RALBP1Q15311 655 aa14.32□□□□□ -0.12
LINC00963-214ENST00000622680 HDGFL1Q5TGJ6 251 aa14.32□□□□□ -0.12
LINC00963-214ENST00000622680 DLK2Q6UY11 383 aa14.32□□□□□ -0.12
LINC00963-214ENST00000622680 SAPCD2Q86UD0 394 aa14.32□□□□□ -0.12
LINC00963-214ENST00000622680 CELF1Q92879 486 aaKnown RBP14.32□□□□□ -0.12
LINC00963-214ENST00000622680 BEGAINQ9BUH8 593 aa14.32□□□□□ -0.12
LINC00963-214ENST00000622680 TRIM35Q9UPQ4 493 aa14.32□□□□□ -0.12
LINC00963-214ENST00000622680 ATP5J2-PTCD1G3V325 749 aa14.31□□□□□ -0.12
LINC00963-214ENST00000622680 CHL1O00533 1208 aa14.31□□□□□ -0.12
LINC00963-214ENST00000622680 RTL5Q5HYW3 569 aaPredicted RBP14.31□□□□□ -0.12
LINC00963-214ENST00000622680 MICALL2Q8IY33 904 aa14.31□□□□□ -0.12
LINC00963-214ENST00000622680 FAM89AQ96GI7 184 aa14.31□□□□□ -0.12
LINC00963-214ENST00000622680 DBNDD1Q9H9R9 158 aa14.31□□□□□ -0.12
LINC00963-214ENST00000622680 ZBTB12Q9Y330 459 aaPredicted RBP14.31□□□□□ -0.12
LINC00963-214ENST00000622680 MYBBP1AQ9BQG0 1328 aaKnown RBP14.31□□□□□ -0.12
LINC00963-214ENST00000622680 PSMD14O00487 310 aa14.3□□□□□ -0.12
LINC00963-214ENST00000622680 TNIP1Q15025 636 aa14.3□□□□□ -0.12
LINC00963-214ENST00000622680 PLBD2Q8NHP8 589 aa14.3□□□□□ -0.12
LINC00963-214ENST00000622680 PGAP2Q9UHJ9 254 aa14.3□□□□□ -0.12
LINC00963-214ENST00000622680 CNOT7Q9UIV1 285 aaKnown RBP14.3□□□□□ -0.12
LINC00963-214ENST00000622680 RIMBP2O15034 1052 aa14.29□□□□□ -0.12
LINC00963-214ENST00000622680 EGFRP00533 1210 aa14.29□□□□□ -0.12
LINC00963-214ENST00000622680 FAM161AQ3B820 660 aa14.29□□□□□ -0.12
LINC00963-214ENST00000622680 SAMD7Q7Z3H4 446 aa14.29□□□□□ -0.12
LINC00963-214ENST00000622680 ISCA1Q9BUE6 129 aa14.29□□□□□ -0.12
LINC00963-214ENST00000622680 RTL9Q8NET4 1388 aa14.29□□□□□ -0.12
LINC00963-214ENST00000622680 GPSM2P81274 684 aa14.28□□□□□ -0.12
LINC00963-214ENST00000622680 TBC1D10BQ4KMP7 808 aaPredicted RBP14.28□□□□□ -0.12
LINC00963-214ENST00000622680 ANKRD13DQ6ZTN6 518 aa14.28□□□□□ -0.12
LINC00963-214ENST00000622680 TMC4Q7Z404 712 aa14.28□□□□□ -0.12
LINC00963-214ENST00000622680 RUNDC1Q96C34 613 aa14.28□□□□□ -0.12
LINC00963-214ENST00000622680 ZIC5Q96T25 663 aa14.28□□□□□ -0.12
LINC00963-214ENST00000622680 KCNQ5Q9NR82 932 aa14.28□□□□□ -0.12
LINC00963-214ENST00000622680 POLLQ9UGP5 575 aa14.28□□□□□ -0.12
LINC00963-214ENST00000622680 NSFL1CQ9UNZ2 370 aaKnown RBP14.28□□□□□ -0.12
LINC00963-214ENST00000622680 C6orf229H3BNL8 230 aa14.27□□□□□ -0.13
LINC00963-214ENST00000622680 H7C1D1 291 aa14.27□□□□□ -0.13
LINC00963-214ENST00000622680 ECE2O60344 883 aa14.27□□□□□ -0.13
LINC00963-214ENST00000622680 MAP2K2P36507 400 aa14.27□□□□□ -0.13
LINC00963-214ENST00000622680 DDX10Q13206 875 aaKnown RBP14.27□□□□□ -0.13
LINC00963-214ENST00000622680 WDR43Q15061 677 aaKnown RBP eCLIP14.27□□□□□ -0.13
LINC00963-214ENST00000622680 DOK7Q18PE1 504 aa14.27□□□□□ -0.13
LINC00963-214ENST00000622680 WASHC4Q2M389 1173 aa14.27□□□□□ -0.13
LINC00963-214ENST00000622680 CDC37L1Q7L3B6 337 aa14.27□□□□□ -0.13
LINC00963-214ENST00000622680 USP48Q86UV5 1035 aa14.27□□□□□ -0.13
LINC00963-214ENST00000622680 ZC3H15Q8WU90 426 aaKnown RBP14.27□□□□□ -0.13
LINC00963-214ENST00000622680 DBF4Q9UBU7 674 aaPredicted RBP14.27□□□□□ -0.13
LINC00963-214ENST00000622680 PAPPA2Q9BXP8 1791 aa14.27□□□□□ -0.13
LINC00963-214ENST00000622680 CCDC85CA6NKD9 419 aa14.26□□□□□ -0.13
LINC00963-214ENST00000622680 ADM5C9JUS6 153 aa14.26□□□□□ -0.13
LINC00963-214ENST00000622680 HOXB7P09629 217 aa14.26□□□□□ -0.13
LINC00963-214ENST00000622680 SF3B3Q15393 1217 aaKnown RBP14.26□□□□□ -0.13
LINC00963-214ENST00000622680 DUSP27Q5VZP5 1158 aa14.26□□□□□ -0.13
LINC00963-214ENST00000622680 HHIPL1Q96JK4 782 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms