RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 USP42Q9H9J4 1324 aaKnown RBP18.66■□□□□ 0.58
NPHP4-211ENST00000622020 GTF2F1P35269 517 aaKnown RBP eCLIP18.66■□□□□ 0.582e-6■■■■■ 27.9
NPHP4-211ENST00000622020 GUCY1B3Q02153 619 aa18.66■□□□□ 0.58
NPHP4-211ENST00000622020 PSME1Q06323 249 aa18.66■□□□□ 0.58
NPHP4-211ENST00000622020 ESCO1Q5FWF5 840 aa18.66■□□□□ 0.58
NPHP4-211ENST00000622020 EPHA10Q5JZY3 1008 aa18.66■□□□□ 0.58
NPHP4-211ENST00000622020 BABAM1Q9NWV8 329 aa18.66■□□□□ 0.58
NPHP4-211ENST00000622020 PXDNLA1KZ92 1463 aa18.65■□□□□ 0.58
NPHP4-211ENST00000622020 PDCP20941 246 aa18.65■□□□□ 0.58
NPHP4-211ENST00000622020 CEMIPQ8WUJ3 1361 aa18.65■□□□□ 0.58
NPHP4-211ENST00000622020 IP6K1Q92551 441 aa18.65■□□□□ 0.58
NPHP4-211ENST00000622020 ZSCAN20P17040 1043 aaPredicted RBP18.64■□□□□ 0.57
NPHP4-211ENST00000622020 CCDC144BQ3MJ40 725 aa18.64■□□□□ 0.57
NPHP4-211ENST00000622020 CCDC144CPQ8IYA2 1237 aa18.64■□□□□ 0.57
NPHP4-211ENST00000622020 SCAND2PQ9GZW5 306 aaPredicted RBP18.64■□□□□ 0.57
NPHP4-211ENST00000622020 CLIP2Q9UDT6 1046 aa18.64■□□□□ 0.57
NPHP4-211ENST00000622020 PIK3C2AO00443 1686 aa18.64■□□□□ 0.57
NPHP4-211ENST00000622020 MTX1Q13505 466 aa18.64■□□□□ 0.57
NPHP4-211ENST00000622020 Q6ZUG5 572 aa18.64■□□□□ 0.57
NPHP4-211ENST00000622020 NWD1Q149M9 1564 aa18.64■□□□□ 0.57
NPHP4-211ENST00000622020 RNMTO43148 476 aaKnown RBP18.63■□□□□ 0.57
NPHP4-211ENST00000622020 TNNT1P13805 278 aa18.63■□□□□ 0.57
NPHP4-211ENST00000622020 DDX46Q7L014 1031 aaKnown RBP18.63■□□□□ 0.57
NPHP4-211ENST00000622020 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.63■□□□□ 0.57
NPHP4-211ENST00000622020 PHF8Q9UPP1 1060 aa18.63■□□□□ 0.57
NPHP4-211ENST00000622020 V9GYY5 206 aaPredicted RBP18.63■□□□□ 0.57
NPHP4-211ENST00000622020 CCT2P78371 535 aaKnown RBP18.63■□□□□ 0.57
NPHP4-211ENST00000622020 TPD52L1Q16890 204 aaPredicted RBP18.63■□□□□ 0.57
NPHP4-211ENST00000622020 PLEKHO1Q53GL0 409 aaPredicted RBP18.63■□□□□ 0.57
NPHP4-211ENST00000622020 AKAP4Q5JQC9 854 aa18.63■□□□□ 0.57
NPHP4-211ENST00000622020 ZSCAN25Q6NSZ9 544 aa18.63■□□□□ 0.57
NPHP4-211ENST00000622020 CHST3Q7LGC8 479 aa18.63■□□□□ 0.57
NPHP4-211ENST00000622020 CACTINQ8WUQ7 758 aaKnown RBP18.63■□□□□ 0.57
NPHP4-211ENST00000622020 ZNF75DP51815 510 aa18.63■□□□□ 0.57
NPHP4-211ENST00000622020 FILIP1Q7Z7B0 1213 aa18.63■□□□□ 0.57
NPHP4-211ENST00000622020 MYD88Q99836 296 aa18.63■□□□□ 0.57
NPHP4-211ENST00000622020 TOPAZ1Q8N9V7 1692 aa18.62■□□□□ 0.57
NPHP4-211ENST00000622020 IGKV5-2P06315 115 aa18.62■□□□□ 0.57
NPHP4-211ENST00000622020 KCNB2Q92953 911 aa18.62■□□□□ 0.57
NPHP4-211ENST00000622020 ALDH1L1O75891 902 aa18.62■□□□□ 0.57
NPHP4-211ENST00000622020 TBX22Q9Y458 520 aa18.62■□□□□ 0.57
NPHP4-211ENST00000622020 NPHP3Q7Z494 1330 aa18.62■□□□□ 0.57
NPHP4-211ENST00000622020 TAF5LO75529 589 aa18.61■□□□□ 0.57
NPHP4-211ENST00000622020 LINS1Q8NG48 757 aa18.61■□□□□ 0.57
NPHP4-211ENST00000622020 TRMT1Q9NXH9 659 aaKnown RBP18.61■□□□□ 0.57
NPHP4-211ENST00000622020 NEK1Q96PY6 1258 aa18.61■□□□□ 0.57
NPHP4-211ENST00000622020 CLSTN2Q9H4D0 955 aa18.61■□□□□ 0.57
NPHP4-211ENST00000622020 USP16Q9Y5T5 823 aa18.61■□□□□ 0.57
NPHP4-211ENST00000622020 ATP5J2-PTCD1G3V325 749 aa18.6■□□□□ 0.57
NPHP4-211ENST00000622020 NPHP1O15259 732 aa18.6■□□□□ 0.57
NPHP4-211ENST00000622020 PTCD1O75127 700 aaKnown RBP18.6■□□□□ 0.57
NPHP4-211ENST00000622020 ANKRD1Q15327 319 aa18.6■□□□□ 0.57
NPHP4-211ENST00000622020 C11orf57Q6ZUT1 292 aaPredicted RBP18.6■□□□□ 0.57
NPHP4-211ENST00000622020 A0A0G2JLW4 131 aa18.6■□□□□ 0.57
NPHP4-211ENST00000622020 USP27XA6NNY8 438 aa18.6■□□□□ 0.57
NPHP4-211ENST00000622020 TPM3P06753 285 aa18.6■□□□□ 0.57
NPHP4-211ENST00000622020 TFCP2Q12800 502 aa18.6■□□□□ 0.57
NPHP4-211ENST00000622020 SYTL4Q96C24 671 aaPredicted RBP18.6■□□□□ 0.57
NPHP4-211ENST00000622020 NCOA5Q9HCD5 579 aaKnown RBP18.6■□□□□ 0.57
NPHP4-211ENST00000622020 GOLGA6L19H0YKK7 550 aa18.6■□□□□ 0.57
NPHP4-211ENST00000622020 HIP1O00291 1037 aa18.6■□□□□ 0.57
NPHP4-211ENST00000622020 DBNLQ9UJU6 430 aaKnown RBP18.6■□□□□ 0.57
NPHP4-211ENST00000622020 DIP2AQ14689 1571 aa18.6■□□□□ 0.57
NPHP4-211ENST00000622020 NPHP4O75161 1426 aaPredicted RBP18.59■□□□□ 0.57
NPHP4-211ENST00000622020 HOXB7P09629 217 aa18.59■□□□□ 0.57
NPHP4-211ENST00000622020 COPS6Q7L5N1 327 aa18.59■□□□□ 0.57
NPHP4-211ENST00000622020 DDX19AQ9NUU7 478 aaKnown RBP18.59■□□□□ 0.57
NPHP4-211ENST00000622020 COL15A1P39059 1388 aa18.59■□□□□ 0.57
NPHP4-211ENST00000622020 XAGE3Q8WTP9 111 aa18.59■□□□□ 0.57
NPHP4-211ENST00000622020 UBR1Q8IWV7 1749 aa18.59■□□□□ 0.57
NPHP4-211ENST00000622020 ELP1O95163 1332 aa18.58■□□□□ 0.57
NPHP4-211ENST00000622020 CYP21A2P08686 494 aa18.58■□□□□ 0.57
NPHP4-211ENST00000622020 DDX58O95786 925 aaKnown RBP18.58■□□□□ 0.56
NPHP4-211ENST00000622020 NCBP1Q09161 790 aaKnown RBP18.58■□□□□ 0.56
NPHP4-211ENST00000622020 SCRN1Q12765 414 aa18.58■□□□□ 0.56
NPHP4-211ENST00000622020 DBNDD2Q9BQY9 259 aa18.58■□□□□ 0.56
NPHP4-211ENST00000622020 LRRC37A3O60309 1634 aa18.58■□□□□ 0.56
NPHP4-211ENST00000622020 APOBRQ0VD83 1088 aa18.58■□□□□ 0.56
NPHP4-211ENST00000622020 UBE3BQ7Z3V4 1068 aa18.58■□□□□ 0.56
NPHP4-211ENST00000622020 GTF3C6Q969F1 213 aa18.58■□□□□ 0.56
NPHP4-211ENST00000622020 NEUROD6Q96NK8 337 aa18.58■□□□□ 0.56
NPHP4-211ENST00000622020 CACNA1FO60840 1977 aa18.57■□□□□ 0.56
NPHP4-211ENST00000622020 DMTNQ08495 405 aa18.57■□□□□ 0.56
NPHP4-211ENST00000622020 PLA2G4DQ86XP0 818 aa18.57■□□□□ 0.56
NPHP4-211ENST00000622020 CCAR1Q8IX12 1150 aaKnown RBP18.57■□□□□ 0.56
NPHP4-211ENST00000622020 BECN2A8MW95 431 aa18.57■□□□□ 0.56
NPHP4-211ENST00000622020 NEXNQ0ZGT2 675 aa18.57■□□□□ 0.56
NPHP4-211ENST00000622020 RESTQ13127 1097 aa18.56■□□□□ 0.56
NPHP4-211ENST00000622020 RAB11FIP4Q86YS3 637 aa18.56■□□□□ 0.56
NPHP4-211ENST00000622020 AXIN2Q9Y2T1 843 aa18.56■□□□□ 0.56
NPHP4-211ENST00000622020 PXDNQ92626 1479 aa18.56■□□□□ 0.56
NPHP4-211ENST00000622020 CCDC112Q8NEF3 446 aa18.55■□□□□ 0.56
NPHP4-211ENST00000622020 ANKRD24Q8TF21 1146 aa18.55■□□□□ 0.56
NPHP4-211ENST00000622020 FMNL2Q96PY5 1086 aa18.55■□□□□ 0.56
NPHP4-211ENST00000622020 GOLPH3LQ9H4A5 285 aa18.55■□□□□ 0.56
NPHP4-211ENST00000622020 PDIA6Q15084 440 aa18.55■□□□□ 0.56
NPHP4-211ENST00000622020 OTUD7BQ6GQQ9 843 aa18.55■□□□□ 0.56
NPHP4-211ENST00000622020 NFATC2IPQ8NCF5 419 aa18.55■□□□□ 0.56
NPHP4-211ENST00000622020 NEURL1BA8MQ27 555 aa18.55■□□□□ 0.56
NPHP4-211ENST00000622020 ME1P48163 572 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 770.2 ms