RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 UTYO14607 1347 aa23.41■■□□□ 1.34
CIRBP-245ENST00000621399 C21orf2O43822 256 aa23.41■■□□□ 1.34
CIRBP-245ENST00000621399 DZIP1LQ8IYY4 767 aaKnown RBP23.41■■□□□ 1.34
CIRBP-245ENST00000621399 DLEC1Q9Y238 1755 aa23.41■■□□□ 1.34
CIRBP-245ENST00000621399 DDX60Q8IY21 1712 aaKnown RBP23.41■■□□□ 1.34
CIRBP-245ENST00000621399 TTLL11Q8NHH1 800 aa23.4■■□□□ 1.34
CIRBP-245ENST00000621399 GRAPQ13588 217 aa23.39■■□□□ 1.33
CIRBP-245ENST00000621399 ARHGAP27Q6ZUM4 889 aa23.39■■□□□ 1.33
CIRBP-245ENST00000621399 TMEM57Q8N5G2 664 aa23.39■■□□□ 1.33
CIRBP-245ENST00000621399 GRAPLQ8TC17 118 aaPredicted RBP23.39■■□□□ 1.33
CIRBP-245ENST00000621399 PLIN1O60240 522 aa23.38■■□□□ 1.33
CIRBP-245ENST00000621399 BBOX1O75936 387 aa23.38■■□□□ 1.33
CIRBP-245ENST00000621399 MS4A1P11836 297 aa23.38■■□□□ 1.33
CIRBP-245ENST00000621399 FOXO4P98177 505 aa23.38■■□□□ 1.33
CIRBP-245ENST00000621399 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.38■■□□□ 1.33
CIRBP-245ENST00000621399 SUCLG2Q96I99 432 aa23.38■■□□□ 1.33
CIRBP-245ENST00000621399 BRCA1P38398 1863 aaKnown RBP23.38■■□□□ 1.33
CIRBP-245ENST00000621399 PPEF1O14829 653 aaPredicted RBP23.37■■□□□ 1.33
CIRBP-245ENST00000621399 CSF1RP07333 972 aa23.37■■□□□ 1.33
CIRBP-245ENST00000621399 C7orf43Q8WVR3 580 aa23.37■■□□□ 1.33
CIRBP-245ENST00000621399 SEC31BQ9NQW1 1179 aa23.37■■□□□ 1.33
CIRBP-245ENST00000621399 UBTFL1P0CB47 393 aaPredicted RBP23.36■■□□□ 1.33
CIRBP-245ENST00000621399 RLBP1P12271 317 aa23.36■■□□□ 1.33
CIRBP-245ENST00000621399 EPHA10Q5JZY3 1008 aa23.36■■□□□ 1.33
CIRBP-245ENST00000621399 SOGA3Q5TF21 947 aa23.36■■□□□ 1.33
CIRBP-245ENST00000621399 CELF1Q92879 486 aaKnown RBP23.36■■□□□ 1.33
CIRBP-245ENST00000621399 TMX4Q9H1E5 349 aaPredicted RBP23.36■■□□□ 1.33
CIRBP-245ENST00000621399 GREM2Q9H772 168 aa23.36■■□□□ 1.33
CIRBP-245ENST00000621399 LAMB2P55268 1798 aa23.36■■□□□ 1.33
CIRBP-245ENST00000621399 LMBR1LQ6UX01 489 aa23.35■■□□□ 1.33
CIRBP-245ENST00000621399 PANK1Q8TE04 598 aa23.35■■□□□ 1.33
CIRBP-245ENST00000621399 KAZALD1Q96I82 304 aa23.35■■□□□ 1.33
CIRBP-245ENST00000621399 CHMP3Q9Y3E7 222 aa23.35■■□□□ 1.33
CIRBP-245ENST00000621399 RPS8P62241 208 aaKnown RBP23.34■■□□□ 1.33
CIRBP-245ENST00000621399 OLFM4Q6UX06 510 aa23.34■■□□□ 1.33
CIRBP-245ENST00000621399 ITPRIPQ8IWB1 547 aa23.34■■□□□ 1.33
CIRBP-245ENST00000621399 MEIS3Q99687 375 aa23.34■■□□□ 1.33
CIRBP-245ENST00000621399 HDAC5Q9UQL6 1122 aa23.34■■□□□ 1.33
CIRBP-245ENST00000621399 SLX4Q8IY92 1834 aa23.33■■□□□ 1.33
CIRBP-245ENST00000621399 RTL9Q8NET4 1388 aa23.33■■□□□ 1.33
CIRBP-245ENST00000621399 GNAI3P08754 354 aa23.33■■□□□ 1.33
CIRBP-245ENST00000621399 FAM161AQ3B820 660 aa23.33■■□□□ 1.33
CIRBP-245ENST00000621399 CCDC93Q567U6 631 aa23.33■■□□□ 1.33
CIRBP-245ENST00000621399 CDC5LQ99459 802 aaKnown RBP23.33■■□□□ 1.33
CIRBP-245ENST00000621399 BICC1Q9H694 974 aaKnown RBP23.33■■□□□ 1.33
CIRBP-245ENST00000621399 ATP6V0A2Q9Y487 856 aa23.33■■□□□ 1.33
CIRBP-245ENST00000621399 ITGA6P23229 1130 aa23.32■■□□□ 1.32
CIRBP-245ENST00000621399 CC2D2BQ6DHV5 1058 aa23.32■■□□□ 1.32
CIRBP-245ENST00000621399 TMC4Q7Z404 712 aa23.32■■□□□ 1.32
CIRBP-245ENST00000621399 ANKRD18AQ8IVF6 992 aa23.32■■□□□ 1.32
CIRBP-245ENST00000621399 UTRNP46939 3433 aa23.31■■□□□ 1.32
CIRBP-245ENST00000621399 ANKRD18BA2A2Z9 1011 aa23.31■■□□□ 1.32
CIRBP-245ENST00000621399 IFIT5Q13325 482 aaKnown RBP23.31■■□□□ 1.32
CIRBP-245ENST00000621399 SP8Q8IXZ3 490 aa23.31■■□□□ 1.32
CIRBP-245ENST00000621399 RTKN2Q8IZC4 609 aa23.31■■□□□ 1.32
CIRBP-245ENST00000621399 CCDC57Q2TAC2 916 aa23.3■■□□□ 1.32
CIRBP-245ENST00000621399 ANKRD44Q8N8A2 993 aa23.3■■□□□ 1.32
CIRBP-245ENST00000621399 ARFGEF1Q9Y6D6 1849 aa23.3■■□□□ 1.32
CIRBP-245ENST00000621399 IGHMBP2P38935 993 aaKnown RBP23.29■■□□□ 1.32
CIRBP-245ENST00000621399 PDE3AQ14432 1141 aa23.29■■□□□ 1.32
CIRBP-245ENST00000621399 RABL6Q3YEC7 729 aaPredicted RBP23.29■■□□□ 1.32
CIRBP-245ENST00000621399 SLC51AQ86UW1 340 aa23.29■■□□□ 1.32
CIRBP-245ENST00000621399 LRRFIP2Q9Y608 721 aaKnown RBP23.29■■□□□ 1.32
CIRBP-245ENST00000621399 NFKBIEO00221 500 aa23.28■■□□□ 1.32
CIRBP-245ENST00000621399 RASSF7Q02833 373 aa23.28■■□□□ 1.32
CIRBP-245ENST00000621399 GRIPAP1Q4V328 841 aa23.28■■□□□ 1.32
CIRBP-245ENST00000621399 TAOK3Q9H2K8 898 aa23.28■■□□□ 1.32
CIRBP-245ENST00000621399 CACNA1SQ13698 1873 aa23.28■■□□□ 1.32
CIRBP-245ENST00000621399 GNAI2P04899 355 aa23.27■■□□□ 1.32
CIRBP-245ENST00000621399 RRP1P56182 461 aaKnown RBP23.27■■□□□ 1.32
CIRBP-245ENST00000621399 TAF7LQ5H9L4 462 aa23.27■■□□□ 1.32
CIRBP-245ENST00000621399 C20orf194Q5TEA3 1177 aa23.27■■□□□ 1.32
CIRBP-245ENST00000621399 COG6Q9Y2V7 657 aa23.27■■□□□ 1.32
CIRBP-245ENST00000621399 ZBTB7BO15156 539 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-245ENST00000621399 MVPQ14764 893 aaKnown RBP23.26■■□□□ 1.31
CIRBP-245ENST00000621399 MPHOSPH8Q99549 860 aa23.26■■□□□ 1.31
CIRBP-245ENST00000621399 BSDC1Q9NW68 430 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-245ENST00000621399 COL4A1P02462 1669 aa23.25■■□□□ 1.31
CIRBP-245ENST00000621399 FKBP4Q02790 459 aaKnown RBP eCLIP23.25■■□□□ 1.31
CIRBP-245ENST00000621399 DPP8Q6V1X1 898 aaPredicted RBP23.25■■□□□ 1.31
CIRBP-245ENST00000621399 MPNDQ8N594 471 aa23.25■■□□□ 1.31
CIRBP-245ENST00000621399 MYH3P11055 1940 aa23.25■■□□□ 1.31
CIRBP-245ENST00000621399 TAF1P21675 1872 aa23.24■■□□□ 1.31
CIRBP-245ENST00000621399 DDX19BQ9UMR2 479 aa23.24■■□□□ 1.31
CIRBP-245ENST00000621399 NSFL1CQ9UNZ2 370 aaKnown RBP23.24■■□□□ 1.31
CIRBP-245ENST00000621399 LTBP3Q9NS15 1303 aa23.24■■□□□ 1.31
CIRBP-245ENST00000621399 LMNB1P20700 586 aa23.23■■□□□ 1.31
CIRBP-245ENST00000621399 ZNF594Q96JF6 807 aaPredicted RBP23.23■■□□□ 1.31
CIRBP-245ENST00000621399 PSMD1Q99460 953 aa23.23■■□□□ 1.31
CIRBP-245ENST00000621399 GPSM2P81274 684 aa23.22■■□□□ 1.31
CIRBP-245ENST00000621399 C9orf131Q5VYM1 1079 aa23.22■■□□□ 1.31
CIRBP-245ENST00000621399 ZNF277Q9NRM2 450 aaPredicted RBP23.22■■□□□ 1.31
CIRBP-245ENST00000621399 ANKIB1Q9P2G1 1089 aa23.22■■□□□ 1.31
CIRBP-245ENST00000621399 MINPP1Q9UNW1 487 aa23.22■■□□□ 1.31
CIRBP-245ENST00000621399 LDHAL6AQ6ZMR3 332 aa23.21■■□□□ 1.31
CIRBP-245ENST00000621399 CHMP4BQ9H444 224 aaKnown RBP23.21■■□□□ 1.31
CIRBP-245ENST00000621399 RNF181Q9P0P0 153 aa23.21■■□□□ 1.31
CIRBP-245ENST00000621399 SNED1Q8TER0 1413 aa23.21■■□□□ 1.31
CIRBP-245ENST00000621399 PRELPP51888 382 aa23.2■■□□□ 1.3
CIRBP-245ENST00000621399 SUPT20HQ8NEM7 779 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms