RNA–Protein interactions for RNA: ENST00000621286.1

MADCAM1-208, Transcript of mucosal vascular addressin cell adhesion molecule 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MADCAM1, Length 1,203 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MADCAM1-208	ENST00000621286	DDX60	Q8IY21	1712 aa	Known RBP	27.89	■■■□□ 2.05
MADCAM1-208	ENST00000621286	IARS	P41252	1262 aa	Known RBP	27.88	■■■□□ 2.05
MADCAM1-208	ENST00000621286	CCDC152	Q4G0S7	254 aa		27.88	■■■□□ 2.05
MADCAM1-208	ENST00000621286	TMC4	Q7Z404	712 aa		27.88	■■■□□ 2.05
MADCAM1-208	ENST00000621286	LINS1	Q8NG48	757 aa		27.88	■■■□□ 2.05
MADCAM1-208	ENST00000621286	DICER1	Q9UPY3	1922 aa	Known RBP	27.87	■■■□□ 2.05
MADCAM1-208	ENST00000621286		F6X3S4	739 aa		27.87	■■■□□ 2.05
MADCAM1-208	ENST00000621286	KIF3C	O14782	793 aa		27.87	■■■□□ 2.05
MADCAM1-208	ENST00000621286	C16orf71	Q8IYS4	520 aa	Predicted RBP	27.87	■■■□□ 2.05
MADCAM1-208	ENST00000621286	GCKR	Q14397	625 aa		27.86	■■■□□ 2.05
MADCAM1-208	ENST00000621286	JDP2	Q8WYK2	163 aa		27.86	■■■□□ 2.05
MADCAM1-208	ENST00000621286	CDHR2	Q9BYE9	1310 aa		27.86	■■■□□ 2.05
MADCAM1-208	ENST00000621286	DPP8	Q6V1X1	898 aa	Predicted RBP	27.85	■■■□□ 2.05
MADCAM1-208	ENST00000621286	UBE3B	Q7Z3V4	1068 aa		27.85	■■■□□ 2.05
MADCAM1-208	ENST00000621286	MPND	Q8N594	471 aa		27.85	■■■□□ 2.05
MADCAM1-208	ENST00000621286	SUPT20H	Q8NEM7	779 aa		27.85	■■■□□ 2.05
MADCAM1-208	ENST00000621286	CELF1	Q92879	486 aa	Known RBP	27.85	■■■□□ 2.05
MADCAM1-208	ENST00000621286	CCDC85A	Q96PX6	553 aa	Predicted RBP	27.85	■■■□□ 2.05
MADCAM1-208	ENST00000621286	TIAM2	Q8IVF5	1701 aa		27.84	■■■□□ 2.05
MADCAM1-208	ENST00000621286		H7C1W4	665 aa		27.84	■■■□□ 2.05
MADCAM1-208	ENST00000621286	RPS8	P62241	208 aa	Known RBP	27.84	■■■□□ 2.05
MADCAM1-208	ENST00000621286	SLC4A10	Q6U841	1118 aa		27.84	■■■□□ 2.05
MADCAM1-208	ENST00000621286	TRMT2A	Q8IZ69	625 aa	Known RBP	27.84	■■■□□ 2.05
MADCAM1-208	ENST00000621286	TAF1	P21675	1872 aa		27.84	■■■□□ 2.05
MADCAM1-208	ENST00000621286	SLC51A	Q86UW1	340 aa		27.83	■■■□□ 2.05
MADCAM1-208	ENST00000621286	MRPL50	Q8N5N7	158 aa	Known RBP	27.83	■■■□□ 2.05
MADCAM1-208	ENST00000621286	HNRNPU	Q00839	825 aa	Known RBP eCLIP	27.82	■■■□□ 2.04
MADCAM1-208	ENST00000621286	LARGE2	Q8N3Y3	721 aa		27.82	■■■□□ 2.04
MADCAM1-208	ENST00000621286	SEC31B	Q9NQW1	1179 aa		27.82	■■■□□ 2.04
MADCAM1-208	ENST00000621286	VEGFA	P15692	232 aa	Predicted RBP	27.81	■■■□□ 2.04
MADCAM1-208	ENST00000621286	SSH1	Q8WYL5	1049 aa		27.81	■■■□□ 2.04
MADCAM1-208	ENST00000621286	TOMM70	O94826	608 aa		27.8	■■■□□ 2.04
MADCAM1-208	ENST00000621286	CTSW	P56202	376 aa		27.8	■■■□□ 2.04
MADCAM1-208	ENST00000621286	BEND3	Q5T5X7	828 aa		27.8	■■■□□ 2.04
MADCAM1-208	ENST00000621286	NSFL1C	Q9UNZ2	370 aa	Known RBP	27.8	■■■□□ 2.04
MADCAM1-208	ENST00000621286	PPIP5K2	O43314	1243 aa		27.79	■■■□□ 2.04
MADCAM1-208	ENST00000621286	DDN	O94850	711 aa	Predicted RBP	27.79	■■■□□ 2.04
MADCAM1-208	ENST00000621286	ALDH1L2	Q3SY69	923 aa		27.79	■■■□□ 2.04
MADCAM1-208	ENST00000621286	BCL2L13	Q9BXK5	485 aa		27.79	■■■□□ 2.04
MADCAM1-208	ENST00000621286	VPS33B	Q9H267	617 aa		27.79	■■■□□ 2.04
MADCAM1-208	ENST00000621286	SNED1	Q8TER0	1413 aa		27.78	■■■□□ 2.04
MADCAM1-208	ENST00000621286	CT47B1	P0C2W7	299 aa	Predicted RBP	27.78	■■■□□ 2.04
MADCAM1-208	ENST00000621286	EIF6	P56537	245 aa	Known RBP	27.78	■■■□□ 2.04
MADCAM1-208	ENST00000621286	ANKRD18A	Q8IVF6	992 aa		27.78	■■■□□ 2.04
MADCAM1-208	ENST00000621286	NIM1K	Q8IY84	436 aa		27.78	■■■□□ 2.04
MADCAM1-208	ENST00000621286	TTLL11	Q8NHH1	800 aa		27.78	■■■□□ 2.04
MADCAM1-208	ENST00000621286	SMC4	Q9NTJ3	1288 aa		27.78	■■■□□ 2.04
MADCAM1-208	ENST00000621286	CDC5L	Q99459	802 aa	Known RBP	27.77	■■■□□ 2.04
MADCAM1-208	ENST00000621286	SRCIN1	Q9C0H9	1055 aa		27.77	■■■□□ 2.04
MADCAM1-208	ENST00000621286	PTPRC	P08575	1304 aa		27.76	■■■□□ 2.03
MADCAM1-208	ENST00000621286	FZD9	O00144	591 aa		27.76	■■■□□ 2.03
MADCAM1-208	ENST00000621286	AOC3	Q16853	763 aa		27.76	■■■□□ 2.03
MADCAM1-208	ENST00000621286	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.76	■■■□□ 2.03
MADCAM1-208	ENST00000621286	C9orf78	Q9NZ63	289 aa	Predicted RBP	27.76	■■■□□ 2.03
MADCAM1-208	ENST00000621286	C6orf229	H3BNL8	230 aa		27.75	■■■□□ 2.03
MADCAM1-208	ENST00000621286	ALDH1L1	O75891	902 aa		27.75	■■■□□ 2.03
MADCAM1-208	ENST00000621286	PLA2G12B	Q9BX93	195 aa		27.74	■■■□□ 2.03
MADCAM1-208	ENST00000621286	GREM2	Q9H772	168 aa		27.74	■■■□□ 2.03
MADCAM1-208	ENST00000621286	ZNF541	Q9H0D2	1346 aa		27.73	■■■□□ 2.03
MADCAM1-208	ENST00000621286	CASP7	P55210	303 aa		27.73	■■■□□ 2.03
MADCAM1-208	ENST00000621286	GPSM2	P81274	684 aa		27.73	■■■□□ 2.03
MADCAM1-208	ENST00000621286	ANKIB1	Q9P2G1	1089 aa		27.73	■■■□□ 2.03
MADCAM1-208	ENST00000621286	GRM8	O00222	908 aa		27.72	■■■□□ 2.03
MADCAM1-208	ENST00000621286	GJA3	Q9Y6H8	435 aa		27.72	■■■□□ 2.03
MADCAM1-208	ENST00000621286	MYH3	P11055	1940 aa		27.71	■■■□□ 2.03
MADCAM1-208	ENST00000621286	RBM46	Q8TBY0	533 aa	Known RBP	27.71	■■■□□ 2.03
MADCAM1-208	ENST00000621286	IQCA1L	A6NCM1	817 aa		27.7	■■■□□ 2.02
MADCAM1-208	ENST00000621286	POTEC	B2RU33	542 aa		27.7	■■■□□ 2.02
MADCAM1-208	ENST00000621286	RIMBP2	O15034	1052 aa		27.7	■■■□□ 2.02
MADCAM1-208	ENST00000621286	KIAA2012	Q0VF49	1180 aa		27.7	■■■□□ 2.02
MADCAM1-208	ENST00000621286	WASHC4	Q2M389	1173 aa		27.7	■■■□□ 2.02
MADCAM1-208	ENST00000621286	EYA3	Q99504	573 aa		27.7	■■■□□ 2.02
MADCAM1-208	ENST00000621286	CHMP3	Q9Y3E7	222 aa		27.7	■■■□□ 2.02
MADCAM1-208	ENST00000621286	IGHMBP2	P38935	993 aa	Known RBP	27.69	■■■□□ 2.02
MADCAM1-208	ENST00000621286	GPC2	Q8N158	579 aa		27.69	■■■□□ 2.02
MADCAM1-208	ENST00000621286	ZNRF3	Q9ULT6	936 aa		27.69	■■■□□ 2.02
MADCAM1-208	ENST00000621286	WDR90	Q96KV7	1748 aa		27.68	■■■□□ 2.02
MADCAM1-208	ENST00000621286	CSF1R	P07333	972 aa		27.68	■■■□□ 2.02
MADCAM1-208	ENST00000621286	ITGA6	P23229	1130 aa		27.68	■■■□□ 2.02
MADCAM1-208	ENST00000621286	POLL	Q9UGP5	575 aa		27.68	■■■□□ 2.02
MADCAM1-208	ENST00000621286		G3V3G9	751 aa		27.67	■■■□□ 2.02
MADCAM1-208	ENST00000621286	DCAF8	Q5TAQ9	597 aa		27.67	■■■□□ 2.02
MADCAM1-208	ENST00000621286	TBC1D16	Q8TBP0	767 aa		27.67	■■■□□ 2.02
MADCAM1-208	ENST00000621286	MPHOSPH8	Q99549	860 aa		27.67	■■■□□ 2.02
MADCAM1-208	ENST00000621286	BSDC1	Q9NW68	430 aa	Predicted RBP	27.67	■■■□□ 2.02
MADCAM1-208	ENST00000621286	GGA1	Q9UJY5	639 aa		27.67	■■■□□ 2.02
MADCAM1-208	ENST00000621286	NOB1	Q9ULX3	412 aa	Known RBP	27.67	■■■□□ 2.02
MADCAM1-208	ENST00000621286	RTL9	Q8NET4	1388 aa		27.67	■■■□□ 2.02
MADCAM1-208	ENST00000621286	COL4A1	P02462	1669 aa		27.66	■■■□□ 2.02
MADCAM1-208	ENST00000621286	ANKRD18B	A2A2Z9	1011 aa		27.66	■■■□□ 2.02
MADCAM1-208	ENST00000621286	FAM161A	Q3B820	660 aa		27.66	■■■□□ 2.02
MADCAM1-208	ENST00000621286	SMC1B	Q8NDV3	1235 aa		27.66	■■■□□ 2.02
MADCAM1-208	ENST00000621286	L3MBTL3	Q96JM7	780 aa	Predicted RBP	27.66	■■■□□ 2.02
MADCAM1-208	ENST00000621286	ZC3H12C	Q9C0D7	883 aa	Known RBP	27.66	■■■□□ 2.02
MADCAM1-208	ENST00000621286	PODXL2	Q9NZ53	605 aa		27.66	■■■□□ 2.02
MADCAM1-208	ENST00000621286	LRRC37A	A6NMS7	1700 aa		27.66	■■■□□ 2.02
MADCAM1-208	ENST00000621286	UFL1	O94874	794 aa		27.65	■■■□□ 2.02
MADCAM1-208	ENST00000621286	FOXO4	P98177	505 aa		27.65	■■■□□ 2.02
MADCAM1-208	ENST00000621286	FSTL1	Q12841	308 aa		27.65	■■■□□ 2.02
MADCAM1-208	ENST00000621286	HACL1	Q9UJ83	578 aa		27.65	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms