RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 CEP126Q9P2H0 1117 aa12□□□□□ -0.49
VTA1-205ENST00000620996 NMIQ13287 307 aaPredicted RBP12□□□□□ -0.49
VTA1-205ENST00000620996 SMIM5Q71RC9 77 aa11.99□□□□□ -0.49
VTA1-205ENST00000620996 CNNM1Q9NRU3 951 aa11.99□□□□□ -0.49
VTA1-205ENST00000620996 HSPA1LP34931 641 aa11.99□□□□□ -0.49
VTA1-205ENST00000620996 BICDL1Q6ZP65 573 aa11.99□□□□□ -0.49
VTA1-205ENST00000620996 PTF1AQ7RTS3 328 aa11.99□□□□□ -0.49
VTA1-205ENST00000620996 CERKQ8TCT0 537 aa11.99□□□□□ -0.49
VTA1-205ENST00000620996 SMARCC1Q92922 1105 aaPredicted RBP11.99□□□□□ -0.49
VTA1-205ENST00000620996 NRAPQ86VF7 1730 aa11.99□□□□□ -0.49
VTA1-205ENST00000620996 HCLS1P14317 486 aaPredicted RBP11.99□□□□□ -0.49
VTA1-205ENST00000620996 ATG9AQ7Z3C6 839 aa11.99□□□□□ -0.49
VTA1-205ENST00000620996 HSP90AA2PQ14568 343 aaPredicted RBP11.98□□□□□ -0.49
VTA1-205ENST00000620996 METTL24Q5JXM2 366 aa11.98□□□□□ -0.49
VTA1-205ENST00000620996 PRPF40BQ6NWY9 871 aaKnown RBP11.98□□□□□ -0.49
VTA1-205ENST00000620996 INTS5Q6P9B9 1019 aaKnown RBP11.98□□□□□ -0.49
VTA1-205ENST00000620996 GREM2Q9H772 168 aa11.98□□□□□ -0.49
VTA1-205ENST00000620996 GOLIM4O00461 696 aa11.98□□□□□ -0.49
VTA1-205ENST00000620996 ITGA6P23229 1130 aa11.98□□□□□ -0.49
VTA1-205ENST00000620996 LDHAL6AQ6ZMR3 332 aa11.98□□□□□ -0.49
VTA1-205ENST00000620996 A0A1B0GUL7 405 aa11.98□□□□□ -0.49
VTA1-205ENST00000620996 PTH1RQ03431 593 aa11.98□□□□□ -0.49
VTA1-205ENST00000620996 NAP1L5Q96NT1 182 aaPredicted RBP11.98□□□□□ -0.49
VTA1-205ENST00000620996 NIP7Q9Y221 180 aaKnown RBP eCLIP11.98□□□□□ -0.49
VTA1-205ENST00000620996 NUP188Q5SRE5 1749 aa11.97□□□□□ -0.49
VTA1-205ENST00000620996 A0A0D9SFI3 127 aa11.97□□□□□ -0.49
VTA1-205ENST00000620996 ANKRD18BA2A2Z9 1011 aa11.97□□□□□ -0.49
VTA1-205ENST00000620996 HIP1O00291 1037 aa11.97□□□□□ -0.49
VTA1-205ENST00000620996 FKBP4Q02790 459 aaKnown RBP eCLIP11.97□□□□□ -0.49
VTA1-205ENST00000620996 TRIM28Q13263 835 aaKnown RBP11.97□□□□□ -0.49
VTA1-205ENST00000620996 LARP6Q9BRS8 491 aaKnown RBP11.97□□□□□ -0.49
VTA1-205ENST00000620996 SNRKQ9NRH2 765 aa11.97□□□□□ -0.49
VTA1-205ENST00000620996 BCL9LQ86UU0 1499 aa11.97□□□□□ -0.49
VTA1-205ENST00000620996 UBN2Q6ZU65 1347 aa11.97□□□□□ -0.49
VTA1-205ENST00000620996 RAD50Q92878 1312 aa11.97□□□□□ -0.49
VTA1-205ENST00000620996 ATP5JP18859 108 aa11.97□□□□□ -0.49
VTA1-205ENST00000620996 EIF5P55010 431 aaKnown RBP11.97□□□□□ -0.49
VTA1-205ENST00000620996 CTSWP56202 376 aa11.97□□□□□ -0.49
VTA1-205ENST00000620996 LSG1Q9H089 658 aaKnown RBP11.97□□□□□ -0.49
VTA1-205ENST00000620996 COL15A1P39059 1388 aa11.97□□□□□ -0.49
VTA1-205ENST00000620996 AK9Q5TCS8 1911 aa11.97□□□□□ -0.49
VTA1-205ENST00000620996 CHGBP05060 677 aa11.96□□□□□ -0.49
VTA1-205ENST00000620996 IFIT1P09914 478 aaKnown RBP11.96□□□□□ -0.49
VTA1-205ENST00000620996 TTC39AQ5SRH9 613 aa11.96□□□□□ -0.49
VTA1-205ENST00000620996 LRP6O75581 1613 aa11.96□□□□□ -0.49
VTA1-205ENST00000620996 GTF2E1P29083 439 aaPredicted RBP11.96□□□□□ -0.49
VTA1-205ENST00000620996 FGD1P98174 961 aa11.96□□□□□ -0.49
VTA1-205ENST00000620996 FOXD4L5Q5VV16 416 aaPredicted RBP11.96□□□□□ -0.49
VTA1-205ENST00000620996 SUSD4Q5VX71 490 aa11.96□□□□□ -0.49
VTA1-205ENST00000620996 FOXD4L4Q8WXT5 416 aaPredicted RBP11.96□□□□□ -0.49
VTA1-205ENST00000620996 WNK3Q9BYP7 1800 aa11.96□□□□□ -0.49
VTA1-205ENST00000620996 AFF2P51816 1311 aa11.96□□□□□ -0.5
VTA1-205ENST00000620996 ERVV-1B6SEH8 477 aa11.96□□□□□ -0.5
VTA1-205ENST00000620996 CPA1P15085 419 aa11.96□□□□□ -0.5
VTA1-205ENST00000620996 ADORA1P30542 326 aa11.96□□□□□ -0.5
VTA1-205ENST00000620996 HSPA4P34932 840 aa11.96□□□□□ -0.5
VTA1-205ENST00000620996 TTLL11Q8NHH1 800 aa11.96□□□□□ -0.5
VTA1-205ENST00000620996 SPATA31A6Q5VVP1 1343 aa11.95□□□□□ -0.5
VTA1-205ENST00000620996 HELBQ8NG08 1087 aaPredicted RBP11.95□□□□□ -0.5
VTA1-205ENST00000620996 UTP14AQ9BVJ6 771 aaKnown RBP11.95□□□□□ -0.5
VTA1-205ENST00000620996 PDE8AO60658 829 aa11.95□□□□□ -0.5
VTA1-205ENST00000620996 CASTP20810 708 aaKnown RBP11.95□□□□□ -0.5
VTA1-205ENST00000620996 CCDC158Q5M9N0 1113 aa11.95□□□□□ -0.5
VTA1-205ENST00000620996 CCDC129Q6ZRS4 1044 aa11.95□□□□□ -0.5
VTA1-205ENST00000620996 RASEFQ8IZ41 740 aa11.95□□□□□ -0.5
VTA1-205ENST00000620996 FNBP4Q8N3X1 1017 aaPredicted RBP11.95□□□□□ -0.5
VTA1-205ENST00000620996 ZGPATQ8N5A5 531 aaKnown RBP11.95□□□□□ -0.5
VTA1-205ENST00000620996 LINC00116Q8NCU8 138 aa11.95□□□□□ -0.5
VTA1-205ENST00000620996 JAKMIP1Q96N16 626 aaKnown RBP11.95□□□□□ -0.5
VTA1-205ENST00000620996 SNX14Q9Y5W7 946 aa11.95□□□□□ -0.5
VTA1-205ENST00000620996 SH3TC1Q8TE82 1336 aa11.95□□□□□ -0.5
VTA1-205ENST00000620996 TJP1Q07157 1748 aa11.94□□□□□ -0.5
VTA1-205ENST00000620996 NPHP1O15259 732 aa11.94□□□□□ -0.5
VTA1-205ENST00000620996 ANAPC15P60006 121 aa11.94□□□□□ -0.5
VTA1-205ENST00000620996 ZKSCAN1P17029 563 aaPredicted RBP11.94□□□□□ -0.5
VTA1-205ENST00000620996 GSE1Q14687 1217 aa11.94□□□□□ -0.5
VTA1-205ENST00000620996 SLFNL1Q499Z3 407 aa11.94□□□□□ -0.5
VTA1-205ENST00000620996 SEC62Q99442 399 aaKnown RBP11.94□□□□□ -0.5
VTA1-205ENST00000620996 PAG1Q9NWQ8 432 aa11.94□□□□□ -0.5
VTA1-205ENST00000620996 AKAP2Q9Y2D5 859 aa11.94□□□□□ -0.5
VTA1-205ENST00000620996 RBM8AQ9Y5S9 174 aaKnown RBP11.94□□□□□ -0.5
VTA1-205ENST00000620996 CCDC171Q6TFL3 1326 aa11.94□□□□□ -0.5
VTA1-205ENST00000620996 CIAO1O76071 339 aa11.94□□□□□ -0.5
VTA1-205ENST00000620996 ATP2B3Q16720 1220 aa11.94□□□□□ -0.5
VTA1-205ENST00000620996 XAGE2Q96GT9 111 aa11.94□□□□□ -0.5
VTA1-205ENST00000620996 HAUS7Q99871 368 aa11.94□□□□□ -0.5
VTA1-205ENST00000620996 ZNF652Q9Y2D9 606 aa11.94□□□□□ -0.5
VTA1-205ENST00000620996 NWD2Q9ULI1 1742 aa11.94□□□□□ -0.5
VTA1-205ENST00000620996 PHF14O94880 888 aa11.93□□□□□ -0.5
VTA1-205ENST00000620996 CAMTA2O94983 1202 aa11.93□□□□□ -0.5
VTA1-205ENST00000620996 SSFA2P28290 1259 aa11.93□□□□□ -0.5
VTA1-205ENST00000620996 ZNF589Q86UQ0 364 aaPredicted RBP11.93□□□□□ -0.5
VTA1-205ENST00000620996 ZNF34Q8IZ26 560 aa11.93□□□□□ -0.5
VTA1-205ENST00000620996 TNPO1Q92973 898 aaKnown RBP11.93□□□□□ -0.5
VTA1-205ENST00000620996 TMX3Q96JJ7 454 aa11.93□□□□□ -0.5
VTA1-205ENST00000620996 MPHOSPH8Q99549 860 aa11.93□□□□□ -0.5
VTA1-205ENST00000620996 CCNL1Q9UK58 526 aaPredicted RBP11.93□□□□□ -0.5
VTA1-205ENST00000620996 CDHR2Q9BYE9 1310 aa11.93□□□□□ -0.5
VTA1-205ENST00000620996 GNPATO15228 680 aa11.93□□□□□ -0.5
VTA1-205ENST00000620996 GJD4Q96KN9 370 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms