RNA–Protein interactions for RNA: ENST00000619449.1

MALAT1-215, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 794 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-215ENST00000619449 CACNA1SQ13698 1873 aa22.95■■□□□ 1.26
MALAT1-215ENST00000619449 TTLL11Q8NHH1 800 aa22.95■■□□□ 1.26
MALAT1-215ENST00000619449 RBM17Q96I25 401 aaKnown RBP22.95■■□□□ 1.26
MALAT1-215ENST00000619449 KAZALD1Q96I82 304 aa22.95■■□□□ 1.26
MALAT1-215ENST00000619449 SNED1Q8TER0 1413 aa22.94■■□□□ 1.26
MALAT1-215ENST00000619449 GRIN3BO60391 1043 aa22.94■■□□□ 1.26
MALAT1-215ENST00000619449 CSF1RP07333 972 aa22.94■■□□□ 1.26
MALAT1-215ENST00000619449 CTSWP56202 376 aa22.94■■□□□ 1.26
MALAT1-215ENST00000619449 FOXO4P98177 505 aa22.94■■□□□ 1.26
MALAT1-215ENST00000619449 PELP1Q8IZL8 1130 aaKnown RBP22.94■■□□□ 1.26
MALAT1-215ENST00000619449 RTL9Q8NET4 1388 aa22.93■■□□□ 1.26
MALAT1-215ENST00000619449 C9orf78Q9NZ63 289 aaPredicted RBP22.93■■□□□ 1.26
MALAT1-215ENST00000619449 TAF1P21675 1872 aa22.93■■□□□ 1.26
MALAT1-215ENST00000619449 RLBP1P12271 317 aa22.92■■□□□ 1.26
MALAT1-215ENST00000619449 EPHA10Q5JZY3 1008 aa22.92■■□□□ 1.26
MALAT1-215ENST00000619449 GRAPQ13588 217 aa22.91■■□□□ 1.26
MALAT1-215ENST00000619449 CCDC152Q4G0S7 254 aa22.91■■□□□ 1.26
MALAT1-215ENST00000619449 DDX46Q7L014 1031 aaKnown RBP22.91■■□□□ 1.26
MALAT1-215ENST00000619449 GRAPLQ8TC17 118 aaPredicted RBP22.91■■□□□ 1.26
MALAT1-215ENST00000619449 CLUAP1Q96AJ1 413 aa22.91■■□□□ 1.26
MALAT1-215ENST00000619449 SUCLG2Q96I99 432 aa22.91■■□□□ 1.26
MALAT1-215ENST00000619449 DCAF8L1A6NGE4 600 aa22.9■■□□□ 1.26
MALAT1-215ENST00000619449 C21orf2O43822 256 aa22.9■■□□□ 1.26
MALAT1-215ENST00000619449 SLC51AQ86UW1 340 aa22.9■■□□□ 1.26
MALAT1-215ENST00000619449 CELF1Q92879 486 aaKnown RBP22.9■■□□□ 1.26
MALAT1-215ENST00000619449 SEC31BQ9NQW1 1179 aa22.9■■□□□ 1.26
MALAT1-215ENST00000619449 FER1L6Q2WGJ9 1857 aa22.9■■□□□ 1.26
MALAT1-215ENST00000619449 BBOX1O75936 387 aa22.89■■□□□ 1.25
MALAT1-215ENST00000619449 TMEM57Q8N5G2 664 aa22.89■■□□□ 1.25
MALAT1-215ENST00000619449 GREM2Q9H772 168 aa22.89■■□□□ 1.25
MALAT1-215ENST00000619449 RABL6Q3YEC7 729 aaPredicted RBP22.88■■□□□ 1.25
MALAT1-215ENST00000619449 OLFM4Q6UX06 510 aa22.88■■□□□ 1.25
MALAT1-215ENST00000619449 DZIP1LQ8IYY4 767 aaKnown RBP22.88■■□□□ 1.25
MALAT1-215ENST00000619449 LRRC37AA6NMS7 1700 aa22.88■■□□□ 1.25
MALAT1-215ENST00000619449 NFKBIEO00221 500 aa22.87■■□□□ 1.25
MALAT1-215ENST00000619449 PPEF1O14829 653 aaPredicted RBP22.87■■□□□ 1.25
MALAT1-215ENST00000619449 CCDC85AQ96PX6 553 aaPredicted RBP22.87■■□□□ 1.25
MALAT1-215ENST00000619449 MEIS3Q99687 375 aa22.87■■□□□ 1.25
MALAT1-215ENST00000619449 ANKRD44Q8N8A2 993 aa22.86■■□□□ 1.25
MALAT1-215ENST00000619449 ZNF219Q9P2Y4 722 aaPredicted RBP22.86■■□□□ 1.25
MALAT1-215ENST00000619449 ATP6V0A2Q9Y487 856 aa22.86■■□□□ 1.25
MALAT1-215ENST00000619449 PLIN1O60240 522 aa22.85■■□□□ 1.25
MALAT1-215ENST00000619449 PRELPP51888 382 aa22.85■■□□□ 1.25
MALAT1-215ENST00000619449 RPS8P62241 208 aaKnown RBP22.85■■□□□ 1.25
MALAT1-215ENST00000619449 FAM161AQ3B820 660 aa22.85■■□□□ 1.25
MALAT1-215ENST00000619449 SOGA3Q5TF21 947 aa22.85■■□□□ 1.25
MALAT1-215ENST00000619449 CC2D2BQ6DHV5 1058 aa22.85■■□□□ 1.25
MALAT1-215ENST00000619449 LMBR1LQ6UX01 489 aa22.85■■□□□ 1.25
MALAT1-215ENST00000619449 ARHGAP27Q6ZUM4 889 aa22.85■■□□□ 1.25
MALAT1-215ENST00000619449 SP8Q8IXZ3 490 aa22.85■■□□□ 1.25
MALAT1-215ENST00000619449 BICC1Q9H694 974 aaKnown RBP22.85■■□□□ 1.25
MALAT1-215ENST00000619449 LTBP3Q9NS15 1303 aa22.84■■□□□ 1.25
MALAT1-215ENST00000619449 CCDC93Q567U6 631 aa22.84■■□□□ 1.25
MALAT1-215ENST00000619449 TMC4Q7Z404 712 aa22.84■■□□□ 1.25
MALAT1-215ENST00000619449 ITGA6P23229 1130 aa22.83■■□□□ 1.25
MALAT1-215ENST00000619449 PANK1Q8TE04 598 aa22.83■■□□□ 1.25
MALAT1-215ENST00000619449 SBF1O95248 1867 aa22.83■■□□□ 1.24
MALAT1-215ENST00000619449 CHD4Q14839 1912 aa22.82■■□□□ 1.24
MALAT1-215ENST00000619449 UBTFL1P0CB47 393 aaPredicted RBP22.82■■□□□ 1.24
MALAT1-215ENST00000619449 FTSJ3Q8IY81 847 aaKnown RBP22.82■■□□□ 1.24
MALAT1-215ENST00000619449 LTBP1Q14766 1721 aa22.82■■□□□ 1.24
MALAT1-215ENST00000619449 ZBTB7BO15156 539 aaPredicted RBP22.81■■□□□ 1.24
MALAT1-215ENST00000619449 MS4A1P11836 297 aa22.81■■□□□ 1.24
MALAT1-215ENST00000619449 RASSF7Q02833 373 aa22.81■■□□□ 1.24
MALAT1-215ENST00000619449 GRIPAP1Q4V328 841 aa22.81■■□□□ 1.24
MALAT1-215ENST00000619449 RTKN2Q8IZC4 609 aa22.81■■□□□ 1.24
MALAT1-215ENST00000619449 CDC5LQ99459 802 aaKnown RBP22.81■■□□□ 1.24
MALAT1-215ENST00000619449 GNAI3P08754 354 aa22.8■■□□□ 1.24
MALAT1-215ENST00000619449 PDE3AQ14432 1141 aa22.8■■□□□ 1.24
MALAT1-215ENST00000619449 PSMD1Q99460 953 aa22.8■■□□□ 1.24
MALAT1-215ENST00000619449 DUOX1Q9NRD9 1551 aa22.8■■□□□ 1.24
MALAT1-215ENST00000619449 C20orf194Q5TEA3 1177 aa22.79■■□□□ 1.24
MALAT1-215ENST00000619449 ANKRD18AQ8IVF6 992 aa22.79■■□□□ 1.24
MALAT1-215ENST00000619449 RTFDC1Q9BY42 306 aaPredicted RBP22.79■■□□□ 1.24
MALAT1-215ENST00000619449 BSDC1Q9NW68 430 aaPredicted RBP22.79■■□□□ 1.24
MALAT1-215ENST00000619449 LRRFIP2Q9Y608 721 aaKnown RBP22.79■■□□□ 1.24
MALAT1-215ENST00000619449 ANKRD18BA2A2Z9 1011 aa22.78■■□□□ 1.24
MALAT1-215ENST00000619449 FKBP4Q02790 459 aaKnown RBP eCLIP22.78■■□□□ 1.24
MALAT1-215ENST00000619449 IFIT5Q13325 482 aaKnown RBP22.78■■□□□ 1.24
MALAT1-215ENST00000619449 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.78■■□□□ 1.24
MALAT1-215ENST00000619449 TAOK3Q9H2K8 898 aa22.78■■□□□ 1.24
MALAT1-215ENST00000619449 RFX5P48382 616 aaPredicted RBP22.77■■□□□ 1.24
MALAT1-215ENST00000619449 ITPRIPQ8IWB1 547 aa22.77■■□□□ 1.24
MALAT1-215ENST00000619449 SPEF2Q9C093 1822 aa22.76■■□□□ 1.23
MALAT1-215ENST00000619449 RRP1P56182 461 aaKnown RBP22.76■■□□□ 1.23
MALAT1-215ENST00000619449 MTX1Q13505 466 aa22.76■■□□□ 1.23
MALAT1-215ENST00000619449 MVPQ14764 893 aaKnown RBP22.76■■□□□ 1.23
MALAT1-215ENST00000619449 PODXL2Q9NZ53 605 aa22.76■■□□□ 1.23
MALAT1-215ENST00000619449 HDAC5Q9UQL6 1122 aa22.76■■□□□ 1.23
MALAT1-215ENST00000619449 LMNB1P20700 586 aa22.75■■□□□ 1.23
MALAT1-215ENST00000619449 GPSM2P81274 684 aa22.75■■□□□ 1.23
MALAT1-215ENST00000619449 CCDC57Q2TAC2 916 aa22.75■■□□□ 1.23
MALAT1-215ENST00000619449 MINPP1Q9UNW1 487 aa22.75■■□□□ 1.23
MALAT1-215ENST00000619449 CHMP3Q9Y3E7 222 aa22.75■■□□□ 1.23
MALAT1-215ENST00000619449 CCDC88AQ3V6T2 1871 aa22.75■■□□□ 1.23
MALAT1-215ENST00000619449 IGHMBP2P38935 993 aaKnown RBP22.74■■□□□ 1.23
MALAT1-215ENST00000619449 MPNDQ8N594 471 aa22.74■■□□□ 1.23
MALAT1-215ENST00000619449 ZNF594Q96JF6 807 aaPredicted RBP22.74■■□□□ 1.23
MALAT1-215ENST00000619449 COG6Q9Y2V7 657 aa22.74■■□□□ 1.23
MALAT1-215ENST00000619449 DICER1Q9UPY3 1922 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms