RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 PARP10Q53GL7 1025 aa9.39□□□□□ -0.91
VPS45-213ENST00000618148 HDAC5Q9UQL6 1122 aa9.39□□□□□ -0.91
VPS45-213ENST00000618148 PNPLA7Q6ZV29 1317 aa9.39□□□□□ -0.91
VPS45-213ENST00000618148 GNAI2P04899 355 aa9.39□□□□□ -0.91
VPS45-213ENST00000618148 PCCAP05165 728 aaPredicted RBP9.39□□□□□ -0.91
VPS45-213ENST00000618148 HDAC1Q13547 482 aaPredicted RBP9.39□□□□□ -0.91
VPS45-213ENST00000618148 SLC15A2Q16348 729 aa9.39□□□□□ -0.91
VPS45-213ENST00000618148 SMIM5Q71RC9 77 aa9.39□□□□□ -0.91
VPS45-213ENST00000618148 KAZALD1Q96I82 304 aa9.39□□□□□ -0.91
VPS45-213ENST00000618148 ZBTB47Q9UFB7 747 aaPredicted RBP9.39□□□□□ -0.91
VPS45-213ENST00000618148 SRP68Q9UHB9 627 aaKnown RBP9.39□□□□□ -0.91
VPS45-213ENST00000618148 KDM2BQ8NHM5 1336 aa9.38□□□□□ -0.91
VPS45-213ENST00000618148 CDHR2Q9BYE9 1310 aa9.38□□□□□ -0.91
VPS45-213ENST00000618148 ZPR1O75312 459 aa9.38□□□□□ -0.91
VPS45-213ENST00000618148 GYS1P13807 737 aa9.38□□□□□ -0.91
VPS45-213ENST00000618148 RFC4P35249 363 aa9.38□□□□□ -0.91
VPS45-213ENST00000618148 USPL1Q5W0Q7 1092 aa9.38□□□□□ -0.91
VPS45-213ENST00000618148 CEP85Q6P2H3 762 aa9.38□□□□□ -0.91
VPS45-213ENST00000618148 SIRT2Q8IXJ6 389 aa9.38□□□□□ -0.91
VPS45-213ENST00000618148 RPAP2Q8IXW5 612 aaPredicted RBP9.38□□□□□ -0.91
VPS45-213ENST00000618148 ANKRD44Q8N8A2 993 aa9.38□□□□□ -0.91
VPS45-213ENST00000618148 ZBTB38Q8NAP3 1195 aaPredicted RBP9.38□□□□□ -0.91
VPS45-213ENST00000618148 PLA2G12BQ9BX93 195 aa9.38□□□□□ -0.91
VPS45-213ENST00000618148 C9orf78Q9NZ63 289 aaPredicted RBP9.38□□□□□ -0.91
VPS45-213ENST00000618148 TFCP2L1Q9NZI6 479 aa9.38□□□□□ -0.91
VPS45-213ENST00000618148 LAMB2P55268 1798 aa9.37□□□□□ -0.91
VPS45-213ENST00000618148 RIC1Q4ADV7 1423 aa9.37□□□□□ -0.91
VPS45-213ENST00000618148 PHF14O94880 888 aa9.37□□□□□ -0.91
VPS45-213ENST00000618148 NTSR2O95665 410 aa9.37□□□□□ -0.91
VPS45-213ENST00000618148 RABL6Q3YEC7 729 aaPredicted RBP9.37□□□□□ -0.91
VPS45-213ENST00000618148 UBE3BQ7Z3V4 1068 aa9.37□□□□□ -0.91
VPS45-213ENST00000618148 COL23A1Q86Y22 540 aaPredicted RBP9.37□□□□□ -0.91
VPS45-213ENST00000618148 PLCD3Q8N3E9 789 aa9.37□□□□□ -0.91
VPS45-213ENST00000618148 LRRFIP2Q9Y608 721 aaKnown RBP9.37□□□□□ -0.91
VPS45-213ENST00000618148 GPTP24298 496 aa9.36□□□□□ -0.91
VPS45-213ENST00000618148 TBC1D9BQ66K14 1250 aa9.36□□□□□ -0.91
VPS45-213ENST00000618148 SUCLG2Q96I99 432 aa9.36□□□□□ -0.91
VPS45-213ENST00000618148 ARXQ96QS3 562 aa9.36□□□□□ -0.91
VPS45-213ENST00000618148 OCEL1Q9H607 264 aa9.36□□□□□ -0.91
VPS45-213ENST00000618148 C1orf115Q9H7X2 142 aa9.36□□□□□ -0.91
VPS45-213ENST00000618148 STK32BQ9NY57 414 aa9.36□□□□□ -0.91
VPS45-213ENST00000618148 NIP7Q9Y221 180 aaKnown RBP eCLIP9.36□□□□□ -0.91
VPS45-213ENST00000618148 CARMIL3Q8ND23 1372 aa9.36□□□□□ -0.91
VPS45-213ENST00000618148 TM4SF1P30408 202 aa9.36□□□□□ -0.91
VPS45-213ENST00000618148 NUBP1P53384 320 aa9.36□□□□□ -0.91
VPS45-213ENST00000618148 SUSD4Q5VX71 490 aa9.36□□□□□ -0.91
VPS45-213ENST00000618148 SSH3Q8TE77 659 aa9.36□□□□□ -0.91
VPS45-213ENST00000618148 CCDC136Q96JN2 1154 aa9.36□□□□□ -0.91
VPS45-213ENST00000618148 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.36□□□□□ -0.91
VPS45-213ENST00000618148 SH3TC1Q8TE82 1336 aa9.35□□□□□ -0.91
VPS45-213ENST00000618148 NRXN2Q9P2S2 1712 aa9.35□□□□□ -0.91
VPS45-213ENST00000618148 FOXO4P98177 505 aa9.35□□□□□ -0.91
VPS45-213ENST00000618148 ATP8B2P98198 1209 aa9.35□□□□□ -0.91
VPS45-213ENST00000618148 NFIXQ14938 502 aa9.35□□□□□ -0.91
VPS45-213ENST00000618148 EPHA10Q5JZY3 1008 aa9.35□□□□□ -0.91
VPS45-213ENST00000618148 B4GALNT3Q6L9W6 998 aa9.35□□□□□ -0.91
VPS45-213ENST00000618148 ILDR2Q71H61 639 aa9.35□□□□□ -0.91
VPS45-213ENST00000618148 CENPQQ7L2Z9 268 aaPredicted RBP9.35□□□□□ -0.91
VPS45-213ENST00000618148 PPP1R42Q7Z4L9 355 aa9.35□□□□□ -0.91
VPS45-213ENST00000618148 SMC5Q8IY18 1101 aa9.35□□□□□ -0.91
VPS45-213ENST00000618148 UTP14AQ9BVJ6 771 aaKnown RBP9.35□□□□□ -0.91
VPS45-213ENST00000618148 BICC1Q9H694 974 aaKnown RBP9.35□□□□□ -0.91
VPS45-213ENST00000618148 DDX60Q8IY21 1712 aaKnown RBP9.35□□□□□ -0.91
VPS45-213ENST00000618148 IGHDP01880 384 aa9.34□□□□□ -0.91
VPS45-213ENST00000618148 SLC10A5Q5PT55 438 aa9.34□□□□□ -0.91
VPS45-213ENST00000618148 NLGN1Q8N2Q7 840 aa9.34□□□□□ -0.91
VPS45-213ENST00000618148 FAM89AQ96GI7 184 aa9.34□□□□□ -0.91
VPS45-213ENST00000618148 SETDB2Q96T68 719 aa9.34□□□□□ -0.91
VPS45-213ENST00000618148 NYXQ9GZU5 481 aa9.34□□□□□ -0.91
VPS45-213ENST00000618148 RWDD1Q9H446 243 aaPredicted RBP9.34□□□□□ -0.91
VPS45-213ENST00000618148 TRMT112Q9UI30 125 aaKnown RBP9.34□□□□□ -0.91
VPS45-213ENST00000618148 CASZ1Q86V15 1759 aa9.34□□□□□ -0.91
VPS45-213ENST00000618148 RTL9Q8NET4 1388 aa9.34□□□□□ -0.91
VPS45-213ENST00000618148 PNMA6EA0A0J9YXQ4 647 aa9.33□□□□□ -0.92
VPS45-213ENST00000618148 HMMRO75330 724 aa9.33□□□□□ -0.92
VPS45-213ENST00000618148 CSF1RP07333 972 aa9.33□□□□□ -0.92
VPS45-213ENST00000618148 HSP90B1P14625 803 aaKnown RBP9.33□□□□□ -0.92
VPS45-213ENST00000618148 DCTPP1Q9H773 170 aa9.33□□□□□ -0.92
VPS45-213ENST00000618148 LRP5O75197 1615 aa9.33□□□□□ -0.92
VPS45-213ENST00000618148 MYH3P11055 1940 aa9.33□□□□□ -0.92
VPS45-213ENST00000618148 POLRMTO00411 1230 aaKnown RBP9.32□□□□□ -0.92
VPS45-213ENST00000618148 IRS4O14654 1257 aaPredicted RBP9.32□□□□□ -0.92
VPS45-213ENST00000618148 DDR1Q08345 913 aa9.32□□□□□ -0.92
VPS45-213ENST00000618148 SYNE4Q8N205 404 aa9.32□□□□□ -0.92
VPS45-213ENST00000618148 SLC16A10Q8TF71 515 aa9.32□□□□□ -0.92
VPS45-213ENST00000618148 FAM212AQ96EL1 285 aa9.32□□□□□ -0.92
VPS45-213ENST00000618148 NOP58Q9Y2X3 529 aaKnown RBP9.32□□□□□ -0.92
VPS45-213ENST00000618148 ABCC12Q96J65 1359 aa9.32□□□□□ -0.92
VPS45-213ENST00000618148 SRGAP3O43295 1099 aa9.32□□□□□ -0.92
VPS45-213ENST00000618148 PDE8AO60658 829 aa9.32□□□□□ -0.92
VPS45-213ENST00000618148 RFX5P48382 616 aaPredicted RBP9.32□□□□□ -0.92
VPS45-213ENST00000618148 CTSWP56202 376 aa9.32□□□□□ -0.92
VPS45-213ENST00000618148 JARID2Q92833 1246 aaPredicted RBP9.32□□□□□ -0.92
VPS45-213ENST00000618148 MARVELD3Q96A59 401 aa9.32□□□□□ -0.92
VPS45-213ENST00000618148 GCC1Q96CN9 775 aa9.32□□□□□ -0.92
VPS45-213ENST00000618148 LMBR1LQ6UX01 489 aa9.31□□□□□ -0.92
VPS45-213ENST00000618148 TPTE2Q6XPS3 522 aa9.31□□□□□ -0.92
VPS45-213ENST00000618148 NBPF5PQ86XG9 351 aaPredicted RBP9.31□□□□□ -0.92
VPS45-213ENST00000618148 TTLL11Q8NHH1 800 aa9.31□□□□□ -0.92
VPS45-213ENST00000618148 COPRSQ9NQ92 184 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms