RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 IFT81Q8WYA0 676 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 PAXBP1Q9Y5B6 917 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 RPGRIP1LQ68CZ1 1315 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 IRX3P78415 501 aaPredicted RBP6.84□□□□□ -1.31
RFX3-212ENST00000617270 SATB1Q01826 763 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 FAM69CQ0P6D2 419 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 MCM10Q7L590 875 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 USP16Q9Y5T5 823 aa6.84□□□□□ -1.31
RFX3-212ENST00000617270 ARID4AP29374 1257 aaPredicted RBP6.84□□□□□ -1.32
RFX3-212ENST00000617270 KIAA1524Q8TCG1 905 aa6.84□□□□□ -1.32
RFX3-212ENST00000617270 CDK19Q9BWU1 502 aa6.84□□□□□ -1.32
RFX3-212ENST00000617270 TTC12Q9H892 705 aaPredicted RBP6.84□□□□□ -1.32
RFX3-212ENST00000617270 VPS18Q9P253 973 aa6.84□□□□□ -1.32
RFX3-212ENST00000617270 TLDC2A0PJX2 215 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 TSPY2A6NKD2 308 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 METAP2P50579 478 aaKnown RBP eCLIP6.83□□□□□ -1.32
RFX3-212ENST00000617270 UAP1Q16222 522 aaPredicted RBP6.83□□□□□ -1.32
RFX3-212ENST00000617270 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.83□□□□□ -1.32
RFX3-212ENST00000617270 FAM169AQ9Y6X4 670 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 SCAPERQ9BY12 1400 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 CASQ2O14958 399 aaPredicted RBP6.83□□□□□ -1.32
RFX3-212ENST00000617270 SKILP12757 684 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 NBPF1Q3BBV0 1214 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 USP37Q86T82 979 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 HAUS7Q99871 368 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 THUMPD2Q9BTF0 503 aaKnown RBP6.83□□□□□ -1.32
RFX3-212ENST00000617270 IMPG2Q9BZV3 1241 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 TRMT112Q9UI30 125 aaKnown RBP6.83□□□□□ -1.32
RFX3-212ENST00000617270 PSMD6Q15008 389 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 TTC31Q49AM3 519 aaPredicted RBP6.83□□□□□ -1.32
RFX3-212ENST00000617270 CCDC110Q8TBZ0 833 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 SLC12A5Q9H2X9 1139 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 TMOD3Q9NYL9 352 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 ATP6V0A2Q9Y487 856 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 FCHSD2O94868 740 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 HCLS1P14317 486 aaPredicted RBP6.83□□□□□ -1.32
RFX3-212ENST00000617270 ERCC5P28715 1186 aaPredicted RBP6.83□□□□□ -1.32
RFX3-212ENST00000617270 CYLC1P35663 651 aaPredicted RBP6.83□□□□□ -1.32
RFX3-212ENST00000617270 STAT6P42226 847 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 PPFIBP2Q8ND30 876 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 C6orf229H3BNL8 230 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 ALDH3A1P30838 453 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 PRPHP41219 470 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 UBASH3AP57075 661 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 SLF2Q8IX21 1173 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.83□□□□□ -1.32
RFX3-212ENST00000617270 RMND1Q9NWS8 449 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 EBAG9O00559 213 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 ECM2O94769 699 aaPredicted RBP6.83□□□□□ -1.32
RFX3-212ENST00000617270 PPP1R7Q15435 360 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 PPP1R9BQ96SB3 815 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 CPSF2Q9P2I0 782 aaKnown RBP6.83□□□□□ -1.32
RFX3-212ENST00000617270 FAM184BQ9ULE4 1060 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 FYCO1Q9BQS8 1478 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 ATP2A2P16615 1042 aaKnown RBP6.83□□□□□ -1.32
RFX3-212ENST00000617270 PDE1CQ14123 709 aaPredicted RBP6.83□□□□□ -1.32
RFX3-212ENST00000617270 GBP6Q6ZN66 633 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 WDR63Q8IWG1 891 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 GBP7Q8N8V2 638 aaPredicted RBP6.83□□□□□ -1.32
RFX3-212ENST00000617270 FAM212AQ96EL1 285 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 MPHOSPH6Q99547 160 aaKnown RBP6.83□□□□□ -1.32
RFX3-212ENST00000617270 TACC1O75410 805 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 IRX5P78411 483 aaPredicted RBP6.83□□□□□ -1.32
RFX3-212ENST00000617270 PDE4BQ07343 736 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 TAF12Q16514 161 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 CEP85LQ5SZL2 805 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 PROCA1Q8NCQ7 364 aaPredicted RBP6.83□□□□□ -1.32
RFX3-212ENST00000617270 CABP5Q9NP86 173 aa6.83□□□□□ -1.32
RFX3-212ENST00000617270 ORC3Q9UBD5 711 aaPredicted RBP6.83□□□□□ -1.32
RFX3-212ENST00000617270 CTAGE9A4FU28 777 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 ASIC1P78348 528 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 MFSD6Q6ZSS7 791 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.82□□□□□ -1.32
RFX3-212ENST00000617270 CCT6BQ92526 530 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 LRRC27Q9C0I9 530 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 SNRKQ9NRH2 765 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 GNAT3A8MTJ3 354 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 CCDC170Q8IYT3 715 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 TCHPQ9BT92 498 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 PPP1R12CQ9BZL4 782 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 ZC3H6P61129 1189 aaKnown RBP6.82□□□□□ -1.32
RFX3-212ENST00000617270 SARNPP82979 210 aaKnown RBP6.82□□□□□ -1.32
RFX3-212ENST00000617270 LACTBP83111 547 aaPredicted RBP6.82□□□□□ -1.32
RFX3-212ENST00000617270 DUSP27Q5VZP5 1158 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 SKAP1Q86WV1 359 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 RHOXF2BP0C7M4 288 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 SYKP43405 635 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 KANK3Q6NY19 840 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 CCDC65Q8IXS2 484 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 MRRFQ96E11 262 aaKnown RBP6.82□□□□□ -1.32
RFX3-212ENST00000617270 RHOXF2Q9BQY4 288 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 ATP2B3Q16720 1220 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 CCDC14Q49A88 953 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 GIMAP6Q6P9H5 292 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 SIRT1Q96EB6 747 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 PYM1Q9BRP8 204 aaKnown RBP6.82□□□□□ -1.32
RFX3-212ENST00000617270 HLA-DOAP06340 250 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 INF2Q27J81 1249 aa6.82□□□□□ -1.32
RFX3-212ENST00000617270 INTS8Q75QN2 995 aaKnown RBP6.82□□□□□ -1.32
RFX3-212ENST00000617270 GUCA1BQ9UMX6 200 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms