RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 TIAM2Q8IVF5 1701 aa19.73■□□□□ 0.75
SRGAP2C-205ENST00000617209 GLTPD2A6NH11 291 aa19.73■□□□□ 0.75
SRGAP2C-205ENST00000617209 H7C1W4 665 aa19.73■□□□□ 0.75
SRGAP2C-205ENST00000617209 CWF19L2Q2TBE0 894 aaKnown RBP19.73■□□□□ 0.75
SRGAP2C-205ENST00000617209 CT47B1P0C2W7 299 aaPredicted RBP19.72■□□□□ 0.75
SRGAP2C-205ENST00000617209 GCKRQ14397 625 aa19.72■□□□□ 0.75
SRGAP2C-205ENST00000617209 DPY19L2Q6NUT2 758 aa19.72■□□□□ 0.75
SRGAP2C-205ENST00000617209 VPS33BQ9H267 617 aa19.72■□□□□ 0.75
SRGAP2C-205ENST00000617209 KIF3CO14782 793 aa19.71■□□□□ 0.75
SRGAP2C-205ENST00000617209 C1QTNF8P60827 252 aa19.71■□□□□ 0.75
SRGAP2C-205ENST00000617209 MYH3P11055 1940 aa19.7■□□□□ 0.74
SRGAP2C-205ENST00000617209 IARSP41252 1262 aaKnown RBP19.7■□□□□ 0.74
SRGAP2C-205ENST00000617209 ALDH1L2Q3SY69 923 aa19.7■□□□□ 0.74
SRGAP2C-205ENST00000617209 CCDC152Q4G0S7 254 aa19.7■□□□□ 0.74
SRGAP2C-205ENST00000617209 BEND3Q5T5X7 828 aa19.7■□□□□ 0.74
SRGAP2C-205ENST00000617209 MRPL50Q8N5N7 158 aaKnown RBP19.7■□□□□ 0.74
SRGAP2C-205ENST00000617209 ZNF277Q9NRM2 450 aaPredicted RBP19.7■□□□□ 0.74
SRGAP2C-205ENST00000617209 RPS8P62241 208 aaKnown RBP19.69■□□□□ 0.74
SRGAP2C-205ENST00000617209 SSH1Q8WYL5 1049 aa19.69■□□□□ 0.74
SRGAP2C-205ENST00000617209 JARID2Q92833 1246 aaPredicted RBP19.69■□□□□ 0.74
SRGAP2C-205ENST00000617209 RTFDC1Q9BY42 306 aaPredicted RBP19.69■□□□□ 0.74
SRGAP2C-205ENST00000617209 NMRK2Q9NPI5 230 aa19.69■□□□□ 0.74
SRGAP2C-205ENST00000617209 LRRC37AA6NMS7 1700 aa19.68■□□□□ 0.74
SRGAP2C-205ENST00000617209 F6X3S4 739 aa19.68■□□□□ 0.74
SRGAP2C-205ENST00000617209 CELF1Q92879 486 aaKnown RBP19.68■□□□□ 0.74
SRGAP2C-205ENST00000617209 PLA2G12BQ9BX93 195 aa19.68■□□□□ 0.74
SRGAP2C-205ENST00000617209 CASP7P55210 303 aa19.67■□□□□ 0.74
SRGAP2C-205ENST00000617209 UBE3BQ7Z3V4 1068 aa19.67■□□□□ 0.74
SRGAP2C-205ENST00000617209 MPNDQ8N594 471 aa19.67■□□□□ 0.74
SRGAP2C-205ENST00000617209 SUPT20HQ8NEM7 779 aa19.67■□□□□ 0.74
SRGAP2C-205ENST00000617209 TTLL11Q8NHH1 800 aa19.67■□□□□ 0.74
SRGAP2C-205ENST00000617209 PTPRCP08575 1304 aa19.67■□□□□ 0.74
SRGAP2C-205ENST00000617209 FZD9O00144 591 aa19.66■□□□□ 0.74
SRGAP2C-205ENST00000617209 ALDH1L1O75891 902 aa19.66■□□□□ 0.74
SRGAP2C-205ENST00000617209 TOMM70O94826 608 aa19.66■□□□□ 0.74
SRGAP2C-205ENST00000617209 CTSWP56202 376 aa19.66■□□□□ 0.74
SRGAP2C-205ENST00000617209 JDP2Q8WYK2 163 aa19.66■□□□□ 0.74
SRGAP2C-205ENST00000617209 RRAGCQ9HB90 399 aa19.66■□□□□ 0.74
SRGAP2C-205ENST00000617209 RTL9Q8NET4 1388 aa19.66■□□□□ 0.74
SRGAP2C-205ENST00000617209 VEGFAP15692 232 aaPredicted RBP19.65■□□□□ 0.74
SRGAP2C-205ENST00000617209 DPP8Q6V1X1 898 aaPredicted RBP19.65■□□□□ 0.74
SRGAP2C-205ENST00000617209 SLC51AQ86UW1 340 aa19.65■□□□□ 0.74
SRGAP2C-205ENST00000617209 SEC31BQ9NQW1 1179 aa19.65■□□□□ 0.74
SRGAP2C-205ENST00000617209 WDR90Q96KV7 1748 aa19.65■□□□□ 0.74
SRGAP2C-205ENST00000617209 CSF1RP07333 972 aa19.64■□□□□ 0.73
SRGAP2C-205ENST00000617209 BRPF1P55201 1214 aaPredicted RBP19.64■□□□□ 0.73
SRGAP2C-205ENST00000617209 POTECB2RU33 542 aa19.63■□□□□ 0.73
SRGAP2C-205ENST00000617209 HNRNPUQ00839 825 aaKnown RBP eCLIP19.63■□□□□ 0.73
SRGAP2C-205ENST00000617209 LARGE2Q8N3Y3 721 aa19.63■□□□□ 0.73
SRGAP2C-205ENST00000617209 SRCIN1Q9C0H9 1055 aa19.63■□□□□ 0.73
SRGAP2C-205ENST00000617209 COL4A1P02462 1669 aa19.62■□□□□ 0.73
SRGAP2C-205ENST00000617209 CDC5LQ99459 802 aaKnown RBP19.62■□□□□ 0.73
SRGAP2C-205ENST00000617209 GRM8O00222 908 aa19.61■□□□□ 0.73
SRGAP2C-205ENST00000617209 DDNO94850 711 aaPredicted RBP19.61■□□□□ 0.73
SRGAP2C-205ENST00000617209 KIAA2012Q0VF49 1180 aa19.61■□□□□ 0.73
SRGAP2C-205ENST00000617209 SLC4A10Q6U841 1118 aa19.61■□□□□ 0.73
SRGAP2C-205ENST00000617209 ANKRD18AQ8IVF6 992 aa19.61■□□□□ 0.73
SRGAP2C-205ENST00000617209 L3MBTL3Q96JM7 780 aaPredicted RBP19.61■□□□□ 0.73
SRGAP2C-205ENST00000617209 PODXL2Q9NZ53 605 aa19.61■□□□□ 0.73
SRGAP2C-205ENST00000617209 NSFL1CQ9UNZ2 370 aaKnown RBP19.61■□□□□ 0.73
SRGAP2C-205ENST00000617209 SCN4AP35499 1836 aa19.6■□□□□ 0.73
SRGAP2C-205ENST00000617209 LTBP1Q14766 1721 aa19.6■□□□□ 0.73
SRGAP2C-205ENST00000617209 COL4A5P29400 1685 aa19.6■□□□□ 0.73
SRGAP2C-205ENST00000617209 PPIP5K2O43314 1243 aa19.6■□□□□ 0.73
SRGAP2C-205ENST00000617209 C16orf71Q8IYS4 520 aaPredicted RBP19.6■□□□□ 0.73
SRGAP2C-205ENST00000617209 GPC2Q8N158 579 aa19.6■□□□□ 0.73
SRGAP2C-205ENST00000617209 RBM46Q8TBY0 533 aaKnown RBP19.6■□□□□ 0.73
SRGAP2C-205ENST00000617209 CCDC85AQ96PX6 553 aaPredicted RBP19.6■□□□□ 0.73
SRGAP2C-205ENST00000617209 GREM2Q9H772 168 aa19.6■□□□□ 0.73
SRGAP2C-205ENST00000617209 SMC4Q9NTJ3 1288 aa19.6■□□□□ 0.73
SRGAP2C-205ENST00000617209 UTYO14607 1347 aa19.59■□□□□ 0.73
SRGAP2C-205ENST00000617209 DUOX1Q9NRD9 1551 aa19.59■□□□□ 0.73
SRGAP2C-205ENST00000617209 GPSM2P81274 684 aa19.59■□□□□ 0.73
SRGAP2C-205ENST00000617209 FOXO4P98177 505 aa19.59■□□□□ 0.73
SRGAP2C-205ENST00000617209 AOC3Q16853 763 aa19.59■□□□□ 0.73
SRGAP2C-205ENST00000617209 NIM1KQ8IY84 436 aa19.59■□□□□ 0.73
SRGAP2C-205ENST00000617209 BCL2L13Q9BXK5 485 aa19.59■□□□□ 0.73
SRGAP2C-205ENST00000617209 BSDC1Q9NW68 430 aaPredicted RBP19.59■□□□□ 0.73
SRGAP2C-205ENST00000617209 C9orf78Q9NZ63 289 aaPredicted RBP19.59■□□□□ 0.73
SRGAP2C-205ENST00000617209 ZNF541Q9H0D2 1346 aa19.58■□□□□ 0.73
SRGAP2C-205ENST00000617209 RARSP54136 660 aaKnown RBP19.58■□□□□ 0.72
SRGAP2C-205ENST00000617209 EIF6P56537 245 aaKnown RBP19.58■□□□□ 0.72
SRGAP2C-205ENST00000617209 POLLQ9UGP5 575 aa19.58■□□□□ 0.72
SRGAP2C-205ENST00000617209 ZNRF3Q9ULT6 936 aa19.58■□□□□ 0.72
SRGAP2C-205ENST00000617209 IQCA1LA6NCM1 817 aa19.57■□□□□ 0.72
SRGAP2C-205ENST00000617209 WASHC4Q2M389 1173 aa19.57■□□□□ 0.72
SRGAP2C-205ENST00000617209 TBC1D16Q8TBP0 767 aa19.57■□□□□ 0.72
SRGAP2C-205ENST00000617209 ZBED9Q6R2W3 1325 aa19.56■□□□□ 0.72
SRGAP2C-205ENST00000617209 ITGA6P23229 1130 aa19.56■□□□□ 0.72
SRGAP2C-205ENST00000617209 FSTL1Q12841 308 aa19.56■□□□□ 0.72
SRGAP2C-205ENST00000617209 ARHGAP45Q92619 1136 aa19.56■□□□□ 0.72
SRGAP2C-205ENST00000617209 EYA3Q99504 573 aa19.56■□□□□ 0.72
SRGAP2C-205ENST00000617209 XDHP47989 1333 aa19.55■□□□□ 0.72
SRGAP2C-205ENST00000617209 C6orf229H3BNL8 230 aa19.55■□□□□ 0.72
SRGAP2C-205ENST00000617209 ANKIB1Q9P2G1 1089 aa19.55■□□□□ 0.72
SRGAP2C-205ENST00000617209 NOB1Q9ULX3 412 aaKnown RBP19.55■□□□□ 0.72
SRGAP2C-205ENST00000617209 MINPP1Q9UNW1 487 aa19.55■□□□□ 0.72
SRGAP2C-205ENST00000617209 NBPF7P0C2Y1 421 aaPredicted RBP19.54■□□□□ 0.72
SRGAP2C-205ENST00000617209 IGHMBP2P38935 993 aaKnown RBP19.54■□□□□ 0.72
SRGAP2C-205ENST00000617209 FAM161AQ3B820 660 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 1028.2 ms