RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 C17orf53Q8N3J3 647 aaPredicted RBP21.58■■□□□ 1.05
SPAST-203ENST00000615843 OTUD6BQ8N6M0 293 aa21.58■■□□□ 1.05
SPAST-203ENST00000615843 PUF60Q9UHX1 559 aaKnown RBP21.58■■□□□ 1.05
SPAST-203ENST00000615843 MYO1BO43795 1136 aa21.58■■□□□ 1.04
SPAST-203ENST00000615843 PRPF4BQ13523 1007 aaKnown RBP21.58■■□□□ 1.04
SPAST-203ENST00000615843 MAP3K2Q9Y2U5 619 aa21.58■■□□□ 1.04
SPAST-203ENST00000615843 KARSQ15046 597 aaKnown RBP21.58■■□□□ 1.04
SPAST-203ENST00000615843 CCDC96Q2M329 555 aa21.58■■□□□ 1.04
SPAST-203ENST00000615843 CCDC40Q4G0X9 1142 aa21.58■■□□□ 1.04
SPAST-203ENST00000615843 TMEM266Q2M3C6 531 aa21.57■■□□□ 1.04
SPAST-203ENST00000615843 PI4KAP2A4QPH2 592 aa21.57■■□□□ 1.04
SPAST-203ENST00000615843 POTEJP0CG39 1038 aa21.57■■□□□ 1.04
SPAST-203ENST00000615843 EVCP57679 992 aa21.57■■□□□ 1.04
SPAST-203ENST00000615843 PI4KAP1Q8N8J0 262 aa21.57■■□□□ 1.04
SPAST-203ENST00000615843 RRAGBQ5VZM2 374 aa21.57■■□□□ 1.04
SPAST-203ENST00000615843 Q6ZUG5 572 aa21.57■■□□□ 1.04
SPAST-203ENST00000615843 CNKSR2Q8WXI2 1034 aa21.57■■□□□ 1.04
SPAST-203ENST00000615843 UBA5Q9GZZ9 404 aa21.57■■□□□ 1.04
SPAST-203ENST00000615843 FAM135AQ9P2D6 1515 aa21.57■■□□□ 1.04
SPAST-203ENST00000615843 RNF123Q5XPI4 1314 aa21.57■■□□□ 1.04
SPAST-203ENST00000615843 ATP8B2P98198 1209 aa21.56■■□□□ 1.04
SPAST-203ENST00000615843 AMPD3Q01432 767 aa21.56■■□□□ 1.04
SPAST-203ENST00000615843 CATIPQ7Z7H3 387 aa21.56■■□□□ 1.04
SPAST-203ENST00000615843 CTNNBL1Q8WYA6 563 aaPredicted RBP21.56■■□□□ 1.04
SPAST-203ENST00000615843 STRN4Q9NRL3 753 aa21.56■■□□□ 1.04
SPAST-203ENST00000615843 A0A1B0GUL7 405 aa21.56■■□□□ 1.04
SPAST-203ENST00000615843 TUBBP07437 444 aa21.56■■□□□ 1.04
SPAST-203ENST00000615843 RHOXF2BP0C7M4 288 aa21.56■■□□□ 1.04
SPAST-203ENST00000615843 HDXQ7Z353 690 aa21.56■■□□□ 1.04
SPAST-203ENST00000615843 RHOXF2Q9BQY4 288 aa21.56■■□□□ 1.04
SPAST-203ENST00000615843 RMND1Q9NWS8 449 aa21.56■■□□□ 1.04
SPAST-203ENST00000615843 MARCKSP29966 332 aaPredicted RBP21.56■■□□□ 1.04
SPAST-203ENST00000615843 TCP11L1Q9NUJ3 509 aa21.56■■□□□ 1.04
SPAST-203ENST00000615843 A0A087WZG4 1122 aa21.55■■□□□ 1.04
SPAST-203ENST00000615843 SPTLC2O15270 562 aa21.55■■□□□ 1.04
SPAST-203ENST00000615843 UBA7P41226 1012 aa21.55■■□□□ 1.04
SPAST-203ENST00000615843 AFMP43652 599 aa21.55■■□□□ 1.04
SPAST-203ENST00000615843 TOM1L2Q6ZVM7 507 aa21.55■■□□□ 1.04
SPAST-203ENST00000615843 CEP57Q86XR8 500 aa21.55■■□□□ 1.04
SPAST-203ENST00000615843 ZBTB9Q96C00 473 aa21.55■■□□□ 1.04
SPAST-203ENST00000615843 LZTFL1Q9NQ48 299 aa21.55■■□□□ 1.04
SPAST-203ENST00000615843 MSL1Q68DK7 614 aa21.55■■□□□ 1.04
SPAST-203ENST00000615843 PLCD3Q8N3E9 789 aa21.55■■□□□ 1.04
SPAST-203ENST00000615843 POLR3AO14802 1390 aaPredicted RBP21.55■■□□□ 1.04
SPAST-203ENST00000615843 CCDC121Q6ZUS5 278 aa21.55■■□□□ 1.04
SPAST-203ENST00000615843 DRC1Q96MC2 740 aa21.55■■□□□ 1.04
SPAST-203ENST00000615843 ALG1Q9BT22 464 aa21.55■■□□□ 1.04
SPAST-203ENST00000615843 USHBP1Q8N6Y0 703 aa21.55■■□□□ 1.04
SPAST-203ENST00000615843 IDEP14735 1019 aa21.54■■□□□ 1.04
SPAST-203ENST00000615843 IFIT5Q13325 482 aaKnown RBP21.54■■□□□ 1.04
SPAST-203ENST00000615843 C8orf58Q8NAV2 365 aa21.54■■□□□ 1.04
SPAST-203ENST00000615843 MAGI1Q96QZ7 1491 aaPredicted RBP21.54■■□□□ 1.04
SPAST-203ENST00000615843 ZNF569Q5MCW4 686 aa21.54■■□□□ 1.04
SPAST-203ENST00000615843 CEP85Q6P2H3 762 aa21.54■■□□□ 1.04
SPAST-203ENST00000615843 UTP14AQ9BVJ6 771 aaKnown RBP21.54■■□□□ 1.04
SPAST-203ENST00000615843 TACC1O75410 805 aa21.53■■□□□ 1.04
SPAST-203ENST00000615843 PPP2R3AQ06190 1150 aa21.53■■□□□ 1.04
SPAST-203ENST00000615843 AMOTQ4VCS5 1084 aa21.53■■□□□ 1.04
SPAST-203ENST00000615843 DDX46Q7L014 1031 aaKnown RBP21.53■■□□□ 1.04
SPAST-203ENST00000615843 CALML4Q96GE6 196 aa21.53■■□□□ 1.04
SPAST-203ENST00000615843 SNRKQ9NRH2 765 aa21.53■■□□□ 1.04
SPAST-203ENST00000615843 NSRP1Q9H0G5 558 aaKnown RBP21.53■■□□□ 1.04
SPAST-203ENST00000615843 MKNK2Q9HBH9 465 aa21.53■■□□□ 1.04
SPAST-203ENST00000615843 IFI16Q16666 785 aaKnown RBP21.52■■□□□ 1.04
SPAST-203ENST00000615843 MPRIPQ6WCQ1 1025 aa21.52■■□□□ 1.04
SPAST-203ENST00000615843 ZNF287Q9HBT7 754 aa21.52■■□□□ 1.04
SPAST-203ENST00000615843 PTPRKQ15262 1439 aa21.52■■□□□ 1.04
SPAST-203ENST00000615843 MACROD2A1Z1Q3 448 aa21.52■■□□□ 1.04
SPAST-203ENST00000615843 CHMLP26374 656 aa21.52■■□□□ 1.04
SPAST-203ENST00000615843 ELF2Q15723 593 aa21.52■■□□□ 1.04
SPAST-203ENST00000615843 CCDC155Q8N6L0 562 aa21.52■■□□□ 1.04
SPAST-203ENST00000615843 LMBRD1Q9NUN5 540 aa21.52■■□□□ 1.04
SPAST-203ENST00000615843 KRT86O43790 486 aa21.52■■□□□ 1.03
SPAST-203ENST00000615843 KRT83P78385 493 aa21.52■■□□□ 1.03
SPAST-203ENST00000615843 FAM76AQ8TAV0 307 aa21.51■■□□□ 1.03
SPAST-203ENST00000615843 TTC21BQ7Z4L5 1316 aa21.51■■□□□ 1.03
SPAST-203ENST00000615843 WWC2Q6AWC2 1192 aa21.51■■□□□ 1.03
SPAST-203ENST00000615843 HOOK3Q86VS8 718 aa21.51■■□□□ 1.03
SPAST-203ENST00000615843 OSCARQ8IYS5 282 aa21.51■■□□□ 1.03
SPAST-203ENST00000615843 ZEB2O60315 1214 aa21.51■■□□□ 1.03
SPAST-203ENST00000615843 KCNH5Q8NCM2 988 aa21.51■■□□□ 1.03
SPAST-203ENST00000615843 CAPZA3Q96KX2 299 aa21.51■■□□□ 1.03
SPAST-203ENST00000615843 TCERG1LQ5VWI1 586 aa21.5■■□□□ 1.03
SPAST-203ENST00000615843 ANKRD24Q8TF21 1146 aa21.5■■□□□ 1.03
SPAST-203ENST00000615843 NMIQ13287 307 aaPredicted RBP21.5■■□□□ 1.03
SPAST-203ENST00000615843 KIAA0753Q2KHM9 967 aa21.5■■□□□ 1.03
SPAST-203ENST00000615843 GBP6Q6ZN66 633 aa21.5■■□□□ 1.03
SPAST-203ENST00000615843 GUCA1BQ9UMX6 200 aa21.5■■□□□ 1.03
SPAST-203ENST00000615843 FSD2A1L4K1 749 aa21.49■■□□□ 1.03
SPAST-203ENST00000615843 BMP15O95972 392 aa21.49■■□□□ 1.03
SPAST-203ENST00000615843 DESP17661 470 aa21.49■■□□□ 1.03
SPAST-203ENST00000615843 FBF1Q8TES7 1133 aa21.49■■□□□ 1.03
SPAST-203ENST00000615843 BCL2L12Q9HB09 334 aa21.49■■□□□ 1.03
SPAST-203ENST00000615843 KIF5AQ12840 1032 aa21.49■■□□□ 1.03
SPAST-203ENST00000615843 DNAJC21Q5F1R6 531 aaKnown RBP21.49■■□□□ 1.03
SPAST-203ENST00000615843 PIK3C2GO75747 1445 aa21.49■■□□□ 1.03
SPAST-203ENST00000615843 ZBTB43O43298 467 aa21.49■■□□□ 1.03
SPAST-203ENST00000615843 ZNF500O60304 480 aaPredicted RBP21.49■■□□□ 1.03
SPAST-203ENST00000615843 CCDC114Q96M63 670 aa21.49■■□□□ 1.03
SPAST-203ENST00000615843 ZNF75DP51815 510 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms