RNA–Protein interactions for RNA: ENST00000613916.1

PVT1-222, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 137 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-222	ENST00000613916		A0A087WZG4	1122 aa		9.12	□□□□□ -0.95
PVT1-222	ENST00000613916	GNPAT	O15228	680 aa		9.12	□□□□□ -0.95
PVT1-222	ENST00000613916	CAMTA2	O94983	1202 aa		9.12	□□□□□ -0.95
PVT1-222	ENST00000613916	DPEP1	P16444	411 aa		9.12	□□□□□ -0.95
PVT1-222	ENST00000613916	RC3H1	Q5TC82	1133 aa	Known RBP	9.12	□□□□□ -0.95
PVT1-222	ENST00000613916	UBE3B	Q7Z3V4	1068 aa		9.12	□□□□□ -0.95
PVT1-222	ENST00000613916	DZIP3	Q86Y13	1208 aa	Known RBP	9.12	□□□□□ -0.95
PVT1-222	ENST00000613916	CWC25	Q9NXE8	425 aa	Predicted RBP	9.12	□□□□□ -0.95
PVT1-222	ENST00000613916	PCDH10	Q9P2E7	1040 aa		9.12	□□□□□ -0.95
PVT1-222	ENST00000613916	TBC1D2B	Q9UPU7	963 aa		9.12	□□□□□ -0.95
PVT1-222	ENST00000613916	SBF1	O95248	1867 aa		9.12	□□□□□ -0.95
PVT1-222	ENST00000613916		A0A1B0GUL6	1792 aa		9.12	□□□□□ -0.95
PVT1-222	ENST00000613916	SRGAP3	O43295	1099 aa		9.11	□□□□□ -0.95
PVT1-222	ENST00000613916	SMARCA5	O60264	1052 aa	Predicted RBP	9.11	□□□□□ -0.95
PVT1-222	ENST00000613916	FOXO4	P98177	505 aa		9.11	□□□□□ -0.95
PVT1-222	ENST00000613916	RABL6	Q3YEC7	729 aa	Predicted RBP	9.11	□□□□□ -0.95
PVT1-222	ENST00000613916	ZNF34	Q8IZ26	560 aa		9.11	□□□□□ -0.95
PVT1-222	ENST00000613916	NLGN1	Q8N2Q7	840 aa		9.11	□□□□□ -0.95
PVT1-222	ENST00000613916	RRAGC	Q9HB90	399 aa		9.11	□□□□□ -0.95
PVT1-222	ENST00000613916	HDAC5	Q9UQL6	1122 aa		9.11	□□□□□ -0.95
PVT1-222	ENST00000613916	EXOC6B	Q9Y2D4	811 aa		9.11	□□□□□ -0.95
PVT1-222	ENST00000613916	TIAM2	Q8IVF5	1701 aa		9.11	□□□□□ -0.95
PVT1-222	ENST00000613916	UBN2	Q6ZU65	1347 aa		9.1	□□□□□ -0.95
PVT1-222	ENST00000613916	RPS6KA4	O75676	772 aa		9.1	□□□□□ -0.95
PVT1-222	ENST00000613916	RFX5	P48382	616 aa	Predicted RBP	9.1	□□□□□ -0.95
PVT1-222	ENST00000613916	NLRP10	Q86W26	655 aa		9.1	□□□□□ -0.95
PVT1-222	ENST00000613916	BACH2	Q9BYV9	841 aa		9.1	□□□□□ -0.95
PVT1-222	ENST00000613916	RNF181	Q9P0P0	153 aa		9.1	□□□□□ -0.95
PVT1-222	ENST00000613916	NOP58	Q9Y2X3	529 aa	Known RBP	9.1	□□□□□ -0.95
PVT1-222	ENST00000613916	SALL3	Q9BXA9	1300 aa		9.09	□□□□□ -0.95
PVT1-222	ENST00000613916	PCCA	P05165	728 aa	Predicted RBP	9.09	□□□□□ -0.95
PVT1-222	ENST00000613916	ADRA2B	P18089	450 aa		9.09	□□□□□ -0.95
PVT1-222	ENST00000613916	GPT	P24298	496 aa		9.09	□□□□□ -0.95
PVT1-222	ENST00000613916	C8orf34	Q49A92	452 aa		9.09	□□□□□ -0.95
PVT1-222	ENST00000613916	HSP90AB3P	Q58FF7	597 aa		9.09	□□□□□ -0.95
PVT1-222	ENST00000613916	PLEKHM2	Q8IWE5	1019 aa		9.09	□□□□□ -0.95
PVT1-222	ENST00000613916	SYNE4	Q8N205	404 aa		9.09	□□□□□ -0.95
PVT1-222	ENST00000613916	OTUD7A	Q8TE49	926 aa	Predicted RBP	9.09	□□□□□ -0.95
PVT1-222	ENST00000613916	PIM2	Q9P1W9	311 aa		9.09	□□□□□ -0.95
PVT1-222	ENST00000613916	PA2G4	Q9UQ80	394 aa	Known RBP	9.09	□□□□□ -0.95
PVT1-222	ENST00000613916	CDHR2	Q9BYE9	1310 aa		9.08	□□□□□ -0.96
PVT1-222	ENST00000613916	APBB1	O00213	710 aa		9.08	□□□□□ -0.96
PVT1-222	ENST00000613916	SURF6	O75683	361 aa	Known RBP	9.08	□□□□□ -0.96
PVT1-222	ENST00000613916	GYS1	P13807	737 aa		9.08	□□□□□ -0.96
PVT1-222	ENST00000613916	RTL5	Q5HYW3	569 aa	Predicted RBP	9.08	□□□□□ -0.96
PVT1-222	ENST00000613916	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	9.08	□□□□□ -0.96
PVT1-222	ENST00000613916	FAM89A	Q96GI7	184 aa		9.08	□□□□□ -0.96
PVT1-222	ENST00000613916	PLA2G12B	Q9BX93	195 aa		9.08	□□□□□ -0.96
PVT1-222	ENST00000613916	BCL2L12	Q9HB09	334 aa		9.08	□□□□□ -0.96
PVT1-222	ENST00000613916	PRDM10	Q9NQV6	1147 aa		9.08	□□□□□ -0.96
PVT1-222	ENST00000613916	DLEC1	Q9Y238	1755 aa		9.08	□□□□□ -0.96
PVT1-222	ENST00000613916	RGL2	O15211	777 aa		9.07	□□□□□ -0.96
PVT1-222	ENST00000613916	RAB11FIP3	O75154	756 aa		9.07	□□□□□ -0.96
PVT1-222	ENST00000613916	PTPN12	Q05209	780 aa	Known RBP	9.07	□□□□□ -0.96
PVT1-222	ENST00000613916	DALRD3	Q5D0E6	543 aa	Known RBP	9.07	□□□□□ -0.96
PVT1-222	ENST00000613916	LMBR1L	Q6UX01	489 aa		9.07	□□□□□ -0.96
PVT1-222	ENST00000613916	RHPN1	Q8TCX5	695 aa		9.07	□□□□□ -0.96
PVT1-222	ENST00000613916	LRRCC1	Q9C099	1032 aa		9.07	□□□□□ -0.96
PVT1-222	ENST00000613916	COPRS	Q9NQ92	184 aa		9.07	□□□□□ -0.96
PVT1-222	ENST00000613916	NARF	Q9UHQ1	456 aa		9.07	□□□□□ -0.96
PVT1-222	ENST00000613916	RTCB	Q9Y3I0	505 aa	Known RBP	9.07	□□□□□ -0.96
PVT1-222	ENST00000613916	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	9.07	□□□□□ -0.96
PVT1-222	ENST00000613916	COL4A1	P02462	1669 aa		9.07	□□□□□ -0.96
PVT1-222	ENST00000613916	MYO5A	Q9Y4I1	1855 aa	Known RBP	9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	ARAP2	Q8WZ64	1704 aa		9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	GLTPD2	A6NH11	291 aa		9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	SASH1	O94885	1247 aa		9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	CSF1R	P07333	972 aa		9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	VEGFA	P15692	232 aa	Predicted RBP	9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	FAM161A	Q3B820	660 aa		9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	TRAPPC3L	Q5T215	181 aa		9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	SUSD4	Q5VX71	490 aa		9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	CLEC4G	Q6UXB4	293 aa		9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	NPM2	Q86SE8	214 aa	Known RBP	9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	KLHDC4	Q8TBB5	520 aa		9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	ARHGEF1	Q92888	912 aa	Known RBP	9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	KIF1BP	Q96EK5	621 aa		9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	OSBPL3	Q9H4L5	887 aa		9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	SRP68	Q9UHB9	627 aa	Known RBP	9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	RBM19	Q9Y4C8	960 aa	Known RBP	9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	PARP3	Q9Y6F1	533 aa		9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	ANKRD31	Q8N7Z5	1873 aa		9.06	□□□□□ -0.96
PVT1-222	ENST00000613916	MYH7	P12883	1935 aa		9.05	□□□□□ -0.96
PVT1-222	ENST00000613916	AKAP11	Q9UKA4	1901 aa		9.05	□□□□□ -0.96
PVT1-222	ENST00000613916	FOXN1	O15353	648 aa		9.05	□□□□□ -0.96
PVT1-222	ENST00000613916	NTSR2	O95665	410 aa		9.05	□□□□□ -0.96
PVT1-222	ENST00000613916	GSPT1	P15170	499 aa	Known RBP	9.05	□□□□□ -0.96
PVT1-222	ENST00000613916	PARP10	Q53GL7	1025 aa		9.05	□□□□□ -0.96
PVT1-222	ENST00000613916	HSP90AB4P	Q58FF6	505 aa		9.05	□□□□□ -0.96
PVT1-222	ENST00000613916	IL1RAPL2	Q9NP60	686 aa		9.05	□□□□□ -0.96
PVT1-222	ENST00000613916	CREBZF	Q9NS37	354 aa		9.05	□□□□□ -0.96
PVT1-222	ENST00000613916	STAP2	Q9UGK3	403 aa		9.05	□□□□□ -0.96
PVT1-222	ENST00000613916	TRMT112	Q9UI30	125 aa	Known RBP	9.05	□□□□□ -0.96
PVT1-222	ENST00000613916	NRXN2	Q9P2S2	1712 aa		9.05	□□□□□ -0.96
PVT1-222	ENST00000613916	CNTNAP1	P78357	1384 aa		9.04	□□□□□ -0.96
PVT1-222	ENST00000613916	IRS4	O14654	1257 aa	Predicted RBP	9.04	□□□□□ -0.96
PVT1-222	ENST00000613916	LMNB1	P20700	586 aa		9.04	□□□□□ -0.96
PVT1-222	ENST00000613916	PDE1A	P54750	535 aa		9.04	□□□□□ -0.96
PVT1-222	ENST00000613916	BMP2KL	Q5H9B9	411 aa		9.04	□□□□□ -0.96
PVT1-222	ENST00000613916	TTC22	Q5TAA0	569 aa		9.04	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms