RNA–Protein interactions for RNA: ENST00000611795.1

SCFD2-204, Transcript of sec1 family domain containing 2, humanhuman

TSL 5 BASIC

Gene SCFD2, Length 1,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-204ENST00000611795 SF3B3Q15393 1217 aaKnown RBP23.75■■□□□ 1.39
SCFD2-204ENST00000611795 CCDC85AQ96PX6 553 aaPredicted RBP23.75■■□□□ 1.39
SCFD2-204ENST00000611795 HSP90B1P14625 803 aaKnown RBP23.74■■□□□ 1.39
SCFD2-204ENST00000611795 RFX5P48382 616 aaPredicted RBP23.74■■□□□ 1.39
SCFD2-204ENST00000611795 FAM161AQ3B820 660 aa23.74■■□□□ 1.39
SCFD2-204ENST00000611795 SSH3Q8TE77 659 aa23.74■■□□□ 1.39
SCFD2-204ENST00000611795 GREM2Q9H772 168 aa23.74■■□□□ 1.39
SCFD2-204ENST00000611795 KLRG2A4D1S0 409 aaPredicted RBP23.73■■□□□ 1.39
SCFD2-204ENST00000611795 SRGAP3O43295 1099 aa23.73■■□□□ 1.39
SCFD2-204ENST00000611795 IGHDP01880 384 aa23.73■■□□□ 1.39
SCFD2-204ENST00000611795 NLRP3Q96P20 1036 aa23.73■■□□□ 1.39
SCFD2-204ENST00000611795 BRIP1Q9BX63 1249 aa23.73■■□□□ 1.39
SCFD2-204ENST00000611795 PPP4R2Q9NY27 417 aa23.73■■□□□ 1.39
SCFD2-204ENST00000611795 COL11A2P13942 1736 aaPredicted RBP23.73■■□□□ 1.39
SCFD2-204ENST00000611795 POLD1P28340 1107 aa23.72■■□□□ 1.39
SCFD2-204ENST00000611795 KIF13BQ9NQT8 1826 aa23.72■■□□□ 1.39
SCFD2-204ENST00000611795 RTL9Q8NET4 1388 aa23.72■■□□□ 1.39
SCFD2-204ENST00000611795 HDAC1Q13547 482 aaPredicted RBP23.71■■□□□ 1.39
SCFD2-204ENST00000611795 CRY2Q49AN0 593 aa23.71■■□□□ 1.39
SCFD2-204ENST00000611795 CHMP3Q9Y3E7 222 aa23.71■■□□□ 1.39
SCFD2-204ENST00000611795 SEC31BQ9NQW1 1179 aa23.7■■□□□ 1.38
SCFD2-204ENST00000611795 ITGA6P23229 1130 aa23.69■■□□□ 1.38
SCFD2-204ENST00000611795 CCDC152Q4G0S7 254 aa23.69■■□□□ 1.38
SCFD2-204ENST00000611795 KLHDC4Q8TBB5 520 aa23.69■■□□□ 1.38
SCFD2-204ENST00000611795 SPON1Q9HCB6 807 aa23.69■■□□□ 1.38
SCFD2-204ENST00000611795 TAF1P21675 1872 aa23.69■■□□□ 1.38
SCFD2-204ENST00000611795 LRP5O75197 1615 aa23.68■■□□□ 1.38
SCFD2-204ENST00000611795 B4GALNT3Q6L9W6 998 aa23.68■■□□□ 1.38
SCFD2-204ENST00000611795 PA2G4Q9UQ80 394 aaKnown RBP23.68■■□□□ 1.38
SCFD2-204ENST00000611795 KIAA1551Q9HCM1 1747 aa23.68■■□□□ 1.38
SCFD2-204ENST00000611795 PTPN12Q05209 780 aaKnown RBP23.67■■□□□ 1.38
SCFD2-204ENST00000611795 ZNF594Q96JF6 807 aaPredicted RBP23.67■■□□□ 1.38
SCFD2-204ENST00000611795 HMMRO75330 724 aa23.66■■□□□ 1.38
SCFD2-204ENST00000611795 PDE6BP35913 854 aa23.66■■□□□ 1.38
SCFD2-204ENST00000611795 KDM2BQ8NHM5 1336 aa23.66■■□□□ 1.38
SCFD2-204ENST00000611795 SRGNP10124 158 aa23.65■■□□□ 1.38
SCFD2-204ENST00000611795 IFIT5Q13325 482 aaKnown RBP23.65■■□□□ 1.38
SCFD2-204ENST00000611795 CCDC57Q2TAC2 916 aa23.65■■□□□ 1.38
SCFD2-204ENST00000611795 CCDC136Q96JN2 1154 aa23.65■■□□□ 1.38
SCFD2-204ENST00000611795 RWDD1Q9H446 243 aaPredicted RBP23.65■■□□□ 1.38
SCFD2-204ENST00000611795 COPRSQ9NQ92 184 aa23.65■■□□□ 1.38
SCFD2-204ENST00000611795 ANKRD18BA2A2Z9 1011 aa23.64■■□□□ 1.38
SCFD2-204ENST00000611795 HOXA10P31260 410 aaPredicted RBP23.64■■□□□ 1.38
SCFD2-204ENST00000611795 DCTPP1Q9H773 170 aa23.64■■□□□ 1.38
SCFD2-204ENST00000611795 NOP58Q9Y2X3 529 aaKnown RBP23.64■■□□□ 1.38
SCFD2-204ENST00000611795 SPEF2Q9C093 1822 aa23.64■■□□□ 1.37
SCFD2-204ENST00000611795 CHRNA5P30532 468 aa23.63■■□□□ 1.37
SCFD2-204ENST00000611795 C2CD5Q86YS7 1000 aa23.63■■□□□ 1.37
SCFD2-204ENST00000611795 CELF1Q92879 486 aaKnown RBP23.63■■□□□ 1.37
SCFD2-204ENST00000611795 DLEC1Q9Y238 1755 aa23.63■■□□□ 1.37
SCFD2-204ENST00000611795 RPGRQ92834 1020 aaKnown RBP23.62■■□□□ 1.37
SCFD2-204ENST00000611795 PUS3Q9BZE2 481 aaKnown RBP23.62■■□□□ 1.37
SCFD2-204ENST00000611795 EXOC6BQ9Y2D4 811 aa23.62■■□□□ 1.37
SCFD2-204ENST00000611795 DDX46Q7L014 1031 aaKnown RBP23.61■■□□□ 1.37
SCFD2-204ENST00000611795 SIL1Q9H173 461 aa23.61■■□□□ 1.37
SCFD2-204ENST00000611795 SURF6O75683 361 aaKnown RBP23.6■■□□□ 1.37
SCFD2-204ENST00000611795 NPR1P16066 1061 aa23.6■■□□□ 1.37
SCFD2-204ENST00000611795 GRAPQ13588 217 aa23.6■■□□□ 1.37
SCFD2-204ENST00000611795 LRRC24Q50LG9 513 aa23.6■■□□□ 1.37
SCFD2-204ENST00000611795 ATG9AQ7Z3C6 839 aa23.6■■□□□ 1.37
SCFD2-204ENST00000611795 SLC51AQ86UW1 340 aa23.6■■□□□ 1.37
SCFD2-204ENST00000611795 SMC5Q8IY18 1101 aa23.6■■□□□ 1.37
SCFD2-204ENST00000611795 GRAPLQ8TC17 118 aaPredicted RBP23.6■■□□□ 1.37
SCFD2-204ENST00000611795 RBM17Q96I25 401 aaKnown RBP23.6■■□□□ 1.37
SCFD2-204ENST00000611795 CRAMP1Q96RY5 1269 aa23.6■■□□□ 1.37
SCFD2-204ENST00000611795 KCNA3P22001 575 aa23.59■■□□□ 1.37
SCFD2-204ENST00000611795 MASTLQ96GX5 879 aa23.59■■□□□ 1.37
SCFD2-204ENST00000611795 CDC5LQ99459 802 aaKnown RBP23.59■■□□□ 1.37
SCFD2-204ENST00000611795 H0YIN7 160 aa23.59■■□□□ 1.37
SCFD2-204ENST00000611795 EYA2O00167 538 aa23.59■■□□□ 1.37
SCFD2-204ENST00000611795 DPEP1P16444 411 aa23.59■■□□□ 1.37
SCFD2-204ENST00000611795 TAF7LQ5H9L4 462 aa23.59■■□□□ 1.37
SCFD2-204ENST00000611795 STYK1Q6J9G0 422 aa23.59■■□□□ 1.37
SCFD2-204ENST00000611795 ANKRD18AQ8IVF6 992 aa23.59■■□□□ 1.37
SCFD2-204ENST00000611795 PDZRN3Q9UPQ7 1066 aa23.59■■□□□ 1.37
SCFD2-204ENST00000611795 CD2APQ9Y5K6 639 aa23.59■■□□□ 1.37
SCFD2-204ENST00000611795 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.59■■□□□ 1.37
SCFD2-204ENST00000611795 RPS8P62241 208 aaKnown RBP23.58■■□□□ 1.36
SCFD2-204ENST00000611795 RIPOR2Q9Y4F9 1068 aa23.58■■□□□ 1.36
SCFD2-204ENST00000611795 A0A0G2JLW4 131 aa23.57■■□□□ 1.36
SCFD2-204ENST00000611795 CIAO1O76071 339 aa23.57■■□□□ 1.36
SCFD2-204ENST00000611795 SASH1O94885 1247 aa23.57■■□□□ 1.36
SCFD2-204ENST00000611795 TGFB2P61812 414 aa23.57■■□□□ 1.36
SCFD2-204ENST00000611795 LDHAL6AQ6ZMR3 332 aa23.57■■□□□ 1.36
SCFD2-204ENST00000611795 GCC1Q96CN9 775 aa23.57■■□□□ 1.36
SCFD2-204ENST00000611795 A0A1B0GUL6 1792 aa23.56■■□□□ 1.36
SCFD2-204ENST00000611795 IGHMBP2P38935 993 aaKnown RBP23.56■■□□□ 1.36
SCFD2-204ENST00000611795 CACNA1SQ13698 1873 aa23.56■■□□□ 1.36
SCFD2-204ENST00000611795 CENPQQ7L2Z9 268 aaPredicted RBP23.56■■□□□ 1.36
SCFD2-204ENST00000611795 ZNF622Q969S3 477 aaKnown RBP eCLIP23.56■■□□□ 1.362e-6■□□□□ 8.5
SCFD2-204ENST00000611795 BSDC1Q9NW68 430 aaPredicted RBP23.56■■□□□ 1.36
SCFD2-204ENST00000611795 PPP1R1BQ9UD71 204 aaPredicted RBP23.56■■□□□ 1.36
SCFD2-204ENST00000611795 FBXO3Q9UK99 471 aa23.56■■□□□ 1.36
SCFD2-204ENST00000611795 G3BP1Q13283 466 aaKnown RBP eCLIP23.55■■□□□ 1.36
SCFD2-204ENST00000611795 KLHL34Q8N239 644 aa23.55■■□□□ 1.36
SCFD2-204ENST00000611795 BRCA1P38398 1863 aaKnown RBP23.54■■□□□ 1.36
SCFD2-204ENST00000611795 SLX4Q8IY92 1834 aa23.54■■□□□ 1.36
SCFD2-204ENST00000611795 LRRC37AA6NMS7 1700 aa23.54■■□□□ 1.36
SCFD2-204ENST00000611795 APBB1O00213 710 aa23.54■■□□□ 1.36
SCFD2-204ENST00000611795 NLGN2Q8NFZ4 835 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms