RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 C8orf76Q96K31 380 aa10.19□□□□□ -0.78
LIG4-204ENST00000611712 SHPRHQ149N8 1683 aa10.19□□□□□ -0.78
LIG4-204ENST00000611712 PRAMEF22A3QJZ6 481 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 ANO6Q4KMQ2 910 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 DBNDD2Q9BQY9 259 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 NPHP3Q7Z494 1330 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 RPS6KB1P23443 525 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 DDIT3P35638 169 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 ME3Q16798 604 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 ADCK5Q3MIX3 580 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 ZSCAN25Q6NSZ9 544 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 OLFM4Q6UX06 510 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 FSIP1Q8NA03 581 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 DCAF5Q96JK2 942 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 TM6SF1Q9BZW5 370 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 ZSCAN16Q9H4T2 348 aaPredicted RBP10.18□□□□□ -0.78
LIG4-204ENST00000611712 C19orf44Q9H6X5 657 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 TMOD3Q9NYL9 352 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 CLIP2Q9UDT6 1046 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 ZDHHC9Q9Y397 364 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 TYRO3Q06418 890 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 POLA2Q14181 598 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 TNNI3KQ59H18 835 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 CLEC17AQ6ZS10 378 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 RAB11FIP4Q86YS3 637 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 JMYQ8N9B5 988 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 PI4K2BQ8TCG2 481 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 FPGT-TNNI3KV9GXZ4 949 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 STARD3NLO95772 234 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 PRKCSHP14314 528 aaPredicted RBP10.18□□□□□ -0.78
LIG4-204ENST00000611712 SART3Q15020 963 aaKnown RBP10.18□□□□□ -0.78
LIG4-204ENST00000611712 CCAR1Q8IX12 1150 aaKnown RBP10.18□□□□□ -0.78
LIG4-204ENST00000611712 CCDC112Q8NEF3 446 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 SLC52A2Q9HAB3 445 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 PAG1Q9NWQ8 432 aa10.18□□□□□ -0.78
LIG4-204ENST00000611712 GPTP24298 496 aa10.17□□□□□ -0.78
LIG4-204ENST00000611712 TIMM10P62072 90 aa10.17□□□□□ -0.78
LIG4-204ENST00000611712 ANO10Q9NW15 660 aa10.17□□□□□ -0.78
LIG4-204ENST00000611712 KDRP35968 1356 aa10.17□□□□□ -0.78
LIG4-204ENST00000611712 USP31Q70CQ4 1352 aa10.17□□□□□ -0.78
LIG4-204ENST00000611712 TMEM131LA2VDJ0 1609 aa10.17□□□□□ -0.78
LIG4-204ENST00000611712 CDC42BPGQ6DT37 1551 aa10.17□□□□□ -0.78
LIG4-204ENST00000611712 PREX1Q8TCU6 1659 aa10.17□□□□□ -0.78
LIG4-204ENST00000611712 A0A0D9SFI3 127 aa10.17□□□□□ -0.78
LIG4-204ENST00000611712 GOLGA8BA8MQT2 603 aa10.17□□□□□ -0.78
LIG4-204ENST00000611712 ZNF213O14771 459 aa10.17□□□□□ -0.78
LIG4-204ENST00000611712 IL15P40933 162 aaPredicted RBP10.17□□□□□ -0.78
LIG4-204ENST00000611712 CHST3Q7LGC8 479 aa10.17□□□□□ -0.78
LIG4-204ENST00000611712 NEURL1BA8MQ27 555 aa10.17□□□□□ -0.78
LIG4-204ENST00000611712 CTAGE5O15320 804 aa10.17□□□□□ -0.78
LIG4-204ENST00000611712 ZSWIM6Q9HCJ5 1215 aa10.17□□□□□ -0.78
LIG4-204ENST00000611712 ERBB4Q15303 1308 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 DYNC1I1O14576 645 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 POLR3DP05423 398 aaPredicted RBP10.16□□□□□ -0.78
LIG4-204ENST00000611712 CDC37L1Q7L3B6 337 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 MPHOSPH8Q99549 860 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 MTMR6Q9Y217 621 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 USP16Q9Y5T5 823 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 APOBRQ0VD83 1088 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 LDHAL6AQ6ZMR3 332 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 CCDC186Q7Z3E2 898 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 CADPS2Q86UW7 1296 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 CCAR2Q8N163 923 aaKnown RBP10.16□□□□□ -0.78
LIG4-204ENST00000611712 ZCRB1Q8TBF4 217 aaKnown RBP10.16□□□□□ -0.78
LIG4-204ENST00000611712 C16orf45Q96MC5 204 aaPredicted RBP10.16□□□□□ -0.78
LIG4-204ENST00000611712 DNAJC25Q9H1X3 360 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 ORC3Q9UBD5 711 aaPredicted RBP10.16□□□□□ -0.78
LIG4-204ENST00000611712 TPCN1Q9ULQ1 816 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 OVOS2A0A0J9YW53 1432 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 OVOS2Q6IE36 1432 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 CDKL5O76039 1030 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 LUZP1Q86V48 1076 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 ARHGEF25Q86VW2 580 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 AIDAQ96BJ3 306 aa10.16□□□□□ -0.78
LIG4-204ENST00000611712 SERPINC1P01008 464 aa10.15□□□□□ -0.78
LIG4-204ENST00000611712 CYP2E1P05181 493 aaPredicted RBP10.15□□□□□ -0.78
LIG4-204ENST00000611712 DHX32Q7L7V1 743 aaKnown RBP10.15□□□□□ -0.78
LIG4-204ENST00000611712 PDILTQ8N807 584 aa10.15□□□□□ -0.78
LIG4-204ENST00000611712 CLTCQ00610 1675 aaKnown RBP10.15□□□□□ -0.78
LIG4-204ENST00000611712 NCOA3Q9Y6Q9 1424 aa10.15□□□□□ -0.78
LIG4-204ENST00000611712 PES1O00541 588 aaKnown RBP10.15□□□□□ -0.78
LIG4-204ENST00000611712 TLR7Q9NYK1 1049 aaKnown RBP10.15□□□□□ -0.78
LIG4-204ENST00000611712 CCDC69A6NI79 296 aa10.15□□□□□ -0.78
LIG4-204ENST00000611712 DDX17Q92841 729 aaKnown RBP10.15□□□□□ -0.78
LIG4-204ENST00000611712 STX1AQ16623 288 aa10.15□□□□□ -0.79
LIG4-204ENST00000611712 TRIM22Q8IYM9 498 aa10.15□□□□□ -0.79
LIG4-204ENST00000611712 PRIMPOLQ96LW4 560 aa10.15□□□□□ -0.79
LIG4-204ENST00000611712 NACAP1Q9BZK3 213 aa10.15□□□□□ -0.79
LIG4-204ENST00000611712 MAP2P11137 1827 aaKnown RBP10.15□□□□□ -0.79
LIG4-204ENST00000611712 KLF18A0A0U1RQI7 1052 aa10.14□□□□□ -0.79
LIG4-204ENST00000611712 BIN1O00499 593 aa10.14□□□□□ -0.79
LIG4-204ENST00000611712 JAK2O60674 1132 aa10.14□□□□□ -0.79
LIG4-204ENST00000611712 NUP133Q8WUM0 1156 aa10.14□□□□□ -0.79
LIG4-204ENST00000611712 TRMT112Q9UI30 125 aaKnown RBP10.14□□□□□ -0.79
LIG4-204ENST00000611712 PTPDC1A2A3K4 754 aa10.14□□□□□ -0.79
LIG4-204ENST00000611712 TDO2P48775 406 aa10.14□□□□□ -0.79
LIG4-204ENST00000611712 C17orf53Q8N3J3 647 aaPredicted RBP10.14□□□□□ -0.79
LIG4-204ENST00000611712 PLBD2Q8NHP8 589 aa10.14□□□□□ -0.79
LIG4-204ENST00000611712 MAP4K1Q92918 833 aa10.14□□□□□ -0.79
LIG4-204ENST00000611712 LARGE1O95461 756 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 844.7 ms