RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 KRT27Q7Z3Y8 459 aa22.22■■□□□ 1.15
SNAPC3-207ENST00000610884 USP26Q9BXU7 913 aa22.22■■□□□ 1.15
SNAPC3-207ENST00000610884 SEC31BQ9NQW1 1179 aa22.22■■□□□ 1.15
SNAPC3-207ENST00000610884 BRPF3Q9ULD4 1205 aa22.22■■□□□ 1.15
SNAPC3-207ENST00000610884 FRAT2O75474 233 aaPredicted RBP22.21■■□□□ 1.15
SNAPC3-207ENST00000610884 IFIT5Q13325 482 aaKnown RBP22.21■■□□□ 1.15
SNAPC3-207ENST00000610884 SLKQ9H2G2 1235 aaPredicted RBP22.21■■□□□ 1.15
SNAPC3-207ENST00000610884 ANO2Q9NQ90 1003 aa22.21■■□□□ 1.15
SNAPC3-207ENST00000610884 TBC1D9BQ66K14 1250 aa22.21■■□□□ 1.15
SNAPC3-207ENST00000610884 HSP90AB3PQ58FF7 597 aa22.2■■□□□ 1.14
SNAPC3-207ENST00000610884 C3orf67Q6ZVT6 689 aa22.2■■□□□ 1.14
SNAPC3-207ENST00000610884 DNAJC2Q99543 621 aaKnown RBP22.2■■□□□ 1.14
SNAPC3-207ENST00000610884 EYA2O00167 538 aa22.2■■□□□ 1.14
SNAPC3-207ENST00000610884 CTSWP56202 376 aa22.2■■□□□ 1.14
SNAPC3-207ENST00000610884 CASC1Q6TDU7 716 aa22.2■■□□□ 1.14
SNAPC3-207ENST00000610884 FAM196AQ6ZSG2 479 aa22.2■■□□□ 1.14
SNAPC3-207ENST00000610884 ESYT1Q9BSJ8 1104 aa22.2■■□□□ 1.14
SNAPC3-207ENST00000610884 BCL2L12Q9HB09 334 aa22.2■■□□□ 1.14
SNAPC3-207ENST00000610884 GLRX3O76003 335 aaKnown RBP22.19■■□□□ 1.14
SNAPC3-207ENST00000610884 CSF1RP07333 972 aa22.19■■□□□ 1.14
SNAPC3-207ENST00000610884 ADORA1P30542 326 aa22.19■■□□□ 1.14
SNAPC3-207ENST00000610884 RBM25P49756 843 aaKnown RBP22.19■■□□□ 1.14
SNAPC3-207ENST00000610884 LDHAL6AQ6ZMR3 332 aa22.19■■□□□ 1.14
SNAPC3-207ENST00000610884 ARHGEF1Q92888 912 aaKnown RBP22.19■■□□□ 1.14
SNAPC3-207ENST00000610884 ERC2O15083 957 aa22.18■■□□□ 1.14
SNAPC3-207ENST00000610884 UTP14AQ9BVJ6 771 aaKnown RBP22.18■■□□□ 1.14
SNAPC3-207ENST00000610884 FOXD4L1Q9NU39 408 aa22.18■■□□□ 1.14
SNAPC3-207ENST00000610884 WTIPA6NIX2 430 aaPredicted RBP22.17■■□□□ 1.14
SNAPC3-207ENST00000610884 ERFEQ4G0M1 354 aa22.17■■□□□ 1.14
SNAPC3-207ENST00000610884 FAM227BQ96M60 508 aa22.17■■□□□ 1.14
SNAPC3-207ENST00000610884 UTRNP46939 3433 aa22.17■■□□□ 1.14
SNAPC3-207ENST00000610884 CNTROBQ8N137 903 aa22.17■■□□□ 1.14
SNAPC3-207ENST00000610884 SNRKQ9NRH2 765 aa22.17■■□□□ 1.14
SNAPC3-207ENST00000610884 SRCAPQ6ZRS2 3230 aa22.16■■□□□ 1.14
SNAPC3-207ENST00000610884 TTC41PQ6P2S7 1318 aa22.16■■□□□ 1.14
SNAPC3-207ENST00000610884 SH3TC1Q8TE82 1336 aa22.16■■□□□ 1.14
SNAPC3-207ENST00000610884 A0A1B0GUL7 405 aa22.16■■□□□ 1.14
SNAPC3-207ENST00000610884 DDX46Q7L014 1031 aaKnown RBP22.16■■□□□ 1.14
SNAPC3-207ENST00000610884 ANO8Q9HCE9 1232 aaPredicted RBP22.16■■□□□ 1.14
SNAPC3-207ENST00000610884 PALD1Q9ULE6 856 aa22.16■■□□□ 1.14
SNAPC3-207ENST00000610884 PDE8AO60658 829 aa22.16■■□□□ 1.14
SNAPC3-207ENST00000610884 SLC51AQ86UW1 340 aa22.16■■□□□ 1.14
SNAPC3-207ENST00000610884 TAF5LO75529 589 aa22.15■■□□□ 1.14
SNAPC3-207ENST00000610884 NTSR2O95665 410 aa22.15■■□□□ 1.14
SNAPC3-207ENST00000610884 PI16Q6UXB8 463 aa22.15■■□□□ 1.14
SNAPC3-207ENST00000610884 GPATCH3Q96I76 525 aa22.15■■□□□ 1.14
SNAPC3-207ENST00000610884 BCL11BQ9C0K0 894 aaPredicted RBP22.15■■□□□ 1.14
SNAPC3-207ENST00000610884 CNNM1Q9NRU3 951 aa22.15■■□□□ 1.14
SNAPC3-207ENST00000610884 RTCBQ9Y3I0 505 aaKnown RBP22.15■■□□□ 1.14
SNAPC3-207ENST00000610884 BRWD3Q6RI45 1802 aa22.15■■□□□ 1.14
SNAPC3-207ENST00000610884 IL15P40933 162 aaPredicted RBP22.14■■□□□ 1.13
SNAPC3-207ENST00000610884 CEP126Q9P2H0 1117 aa22.14■■□□□ 1.13
SNAPC3-207ENST00000610884 TUBGCP6Q96RT7 1819 aa22.14■■□□□ 1.13
SNAPC3-207ENST00000610884 RPS6KA4O75676 772 aa22.14■■□□□ 1.13
SNAPC3-207ENST00000610884 GTF2E1P29083 439 aaPredicted RBP22.14■■□□□ 1.13
SNAPC3-207ENST00000610884 PROM2Q8N271 834 aa22.14■■□□□ 1.13
SNAPC3-207ENST00000610884 USP42Q9H9J4 1324 aaKnown RBP22.13■■□□□ 1.13
SNAPC3-207ENST00000610884 ANKRD18BA2A2Z9 1011 aa22.13■■□□□ 1.13
SNAPC3-207ENST00000610884 ZPR1O75312 459 aa22.13■■□□□ 1.13
SNAPC3-207ENST00000610884 METTL24Q5JXM2 366 aa22.13■■□□□ 1.13
SNAPC3-207ENST00000610884 FSD1Q9BTV5 496 aa22.13■■□□□ 1.13
SNAPC3-207ENST00000610884 PLA2G12BQ9BX93 195 aa22.13■■□□□ 1.13
SNAPC3-207ENST00000610884 ANTXR1Q9H6X2 564 aa22.13■■□□□ 1.13
SNAPC3-207ENST00000610884 AOX1Q06278 1338 aa22.12■■□□□ 1.13
SNAPC3-207ENST00000610884 CDHR2Q9BYE9 1310 aa22.12■■□□□ 1.13
SNAPC3-207ENST00000610884 SBF2Q86WG5 1849 aa22.12■■□□□ 1.13
SNAPC3-207ENST00000610884 AK7Q96M32 723 aa22.12■■□□□ 1.13
SNAPC3-207ENST00000610884 SEC62Q99442 399 aaKnown RBP22.12■■□□□ 1.13
SNAPC3-207ENST00000610884 COL5A3P25940 1745 aaPredicted RBP22.11■■□□□ 1.13
SNAPC3-207ENST00000610884 CNTNAP4Q9C0A0 1308 aa22.11■■□□□ 1.13
SNAPC3-207ENST00000610884 DIAPH3Q9NSV4 1193 aa22.11■■□□□ 1.13
SNAPC3-207ENST00000610884 RGS17Q9UGC6 210 aaPredicted RBP22.11■■□□□ 1.13
SNAPC3-207ENST00000610884 RIPOR2Q9Y4F9 1068 aa22.11■■□□□ 1.13
SNAPC3-207ENST00000610884 REC8O95072 547 aa22.11■■□□□ 1.13
SNAPC3-207ENST00000610884 SCARF1Q14162 830 aa22.11■■□□□ 1.13
SNAPC3-207ENST00000610884 TAF1P21675 1872 aa22.1■■□□□ 1.13
SNAPC3-207ENST00000610884 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.1■■□□□ 1.13
SNAPC3-207ENST00000610884 GOLIM4O00461 696 aa22.1■■□□□ 1.13
SNAPC3-207ENST00000610884 RFC4P35249 363 aa22.1■■□□□ 1.13
SNAPC3-207ENST00000610884 FKBP4Q02790 459 aaKnown RBP eCLIP22.1■■□□□ 1.137e-6■■■■□ 25.4
SNAPC3-207ENST00000610884 PTH1RQ03431 593 aa22.1■■□□□ 1.13
SNAPC3-207ENST00000610884 NOL8Q76FK4 1167 aaKnown RBP22.1■■□□□ 1.13
SNAPC3-207ENST00000610884 COL4A1P02462 1669 aa22.1■■□□□ 1.13
SNAPC3-207ENST00000610884 A0A0D9SFI3 127 aa22.09■■□□□ 1.13
SNAPC3-207ENST00000610884 RBM6P78332 1123 aaKnown RBP22.09■■□□□ 1.13
SNAPC3-207ENST00000610884 NMIQ13287 307 aaPredicted RBP22.09■■□□□ 1.13
SNAPC3-207ENST00000610884 XAGE2Q96GT9 111 aa22.09■■□□□ 1.13
SNAPC3-207ENST00000610884 NHSQ6T4R5 1651 aa22.09■■□□□ 1.13
SNAPC3-207ENST00000610884 GORABQ5T7V8 394 aa22.09■■□□□ 1.13
SNAPC3-207ENST00000610884 EVI5LQ96CN4 794 aa22.09■■□□□ 1.13
SNAPC3-207ENST00000610884 NARFQ9UHQ1 456 aa22.09■■□□□ 1.13
SNAPC3-207ENST00000610884 ZNF652Q9Y2D9 606 aa22.09■■□□□ 1.13
SNAPC3-207ENST00000610884 ANKRD36CQ5JPF3 1778 aa22.09■■□□□ 1.13
SNAPC3-207ENST00000610884 AK9Q5TCS8 1911 aa22.09■■□□□ 1.13
SNAPC3-207ENST00000610884 TRAPPC3LQ5T215 181 aa22.08■■□□□ 1.13
SNAPC3-207ENST00000610884 CCDC129Q6ZRS4 1044 aa22.08■■□□□ 1.13
SNAPC3-207ENST00000610884 SGSM2O43147 1006 aa22.08■■□□□ 1.13
SNAPC3-207ENST00000610884 POTEAQ6S8J7 498 aa22.08■■□□□ 1.13
SNAPC3-207ENST00000610884 SETDB2Q96T68 719 aa22.08■■□□□ 1.13
SNAPC3-207ENST00000610884 NPHP1O15259 732 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms