RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 PLA2G12BQ9BX93 195 aa33.7■■■□□ 2.99
CSPG5-205ENST00000610462 LRRC24Q50LG9 513 aa33.7■■■□□ 2.98
CSPG5-205ENST00000610462 VPS53Q5VIR6 699 aa33.7■■■□□ 2.98
CSPG5-205ENST00000610462 RUFY3Q7L099 469 aa33.7■■■□□ 2.98
CSPG5-205ENST00000610462 DNAJC2Q99543 621 aaKnown RBP33.69■■■□□ 2.98
CSPG5-205ENST00000610462 BRPF3Q9ULD4 1205 aa33.69■■■□□ 2.98
CSPG5-205ENST00000610462 CYP46A1Q9Y6A2 500 aa33.69■■■□□ 2.98
CSPG5-205ENST00000610462 ZNF609O15014 1411 aa33.69■■■□□ 2.98
CSPG5-205ENST00000610462 KLHL40Q2TBA0 621 aa33.68■■■□□ 2.98
CSPG5-205ENST00000610462 ZBTB38Q8NAP3 1195 aaPredicted RBP33.68■■■□□ 2.98
CSPG5-205ENST00000610462 NEUROD6Q96NK8 337 aa33.68■■■□□ 2.98
CSPG5-205ENST00000610462 SYTL4Q96C24 671 aaPredicted RBP33.68■■■□□ 2.98
CSPG5-205ENST00000610462 PDRG1Q9NUG6 133 aa33.68■■■□□ 2.98
CSPG5-205ENST00000610462 SLC27A2O14975 620 aa33.67■■■□□ 2.98
CSPG5-205ENST00000610462 CPA1P15085 419 aa33.67■■■□□ 2.98
CSPG5-205ENST00000610462 LMBRD1Q9NUN5 540 aa33.67■■■□□ 2.98
CSPG5-205ENST00000610462 CCDC57Q2TAC2 916 aa33.67■■■□□ 2.98
CSPG5-205ENST00000610462 ZNF589Q86UQ0 364 aaPredicted RBP33.67■■■□□ 2.98
CSPG5-205ENST00000610462 FBXO3Q9UK99 471 aa33.67■■■□□ 2.98
CSPG5-205ENST00000610462 THRAP3Q9Y2W1 955 aaKnown RBP33.67■■■□□ 2.98
CSPG5-205ENST00000610462 SPATA31A1Q5TZJ5 1347 aa33.66■■■□□ 2.98
CSPG5-205ENST00000610462 HSP90AB3PQ58FF7 597 aa33.66■■■□□ 2.98
CSPG5-205ENST00000610462 RNF20Q5VTR2 975 aa33.66■■■□□ 2.98
CSPG5-205ENST00000610462 ARXQ96QS3 562 aa33.66■■■□□ 2.98
CSPG5-205ENST00000610462 NDUFB9Q9Y6M9 179 aa33.66■■■□□ 2.98
CSPG5-205ENST00000610462 DDX49Q9Y6V7 483 aaKnown RBP33.66■■■□□ 2.98
CSPG5-205ENST00000610462 TIMM10P62072 90 aa33.65■■■□□ 2.98
CSPG5-205ENST00000610462 FAM89AQ96GI7 184 aa33.65■■■□□ 2.98
CSPG5-205ENST00000610462 ISY1Q9ULR0 285 aaKnown RBP33.65■■■□□ 2.98
CSPG5-205ENST00000610462 RPAP1Q9BWH6 1393 aaPredicted RBP33.65■■■□□ 2.98
CSPG5-205ENST00000610462 TAF5LO75529 589 aa33.65■■■□□ 2.98
CSPG5-205ENST00000610462 ADAMTS2O95450 1211 aa33.65■■■□□ 2.98
CSPG5-205ENST00000610462 PRIM1P49642 420 aaKnown RBP33.65■■■□□ 2.98
CSPG5-205ENST00000610462 NUP98P52948 1817 aa33.65■■■□□ 2.98
CSPG5-205ENST00000610462 HLFQ16534 295 aa33.64■■■□□ 2.98
CSPG5-205ENST00000610462 PUS3Q9BZE2 481 aaKnown RBP33.64■■■□□ 2.98
CSPG5-205ENST00000610462 CDHR2Q9BYE9 1310 aa33.64■■■□□ 2.98
CSPG5-205ENST00000610462 CSF1RP07333 972 aa33.64■■■□□ 2.98
CSPG5-205ENST00000610462 KBTBD3Q8NAB2 608 aa33.64■■■□□ 2.98
CSPG5-205ENST00000610462 ZBTB1Q9Y2K1 713 aa33.64■■■□□ 2.98
CSPG5-205ENST00000610462 PSMA5P28066 241 aa33.63■■■□□ 2.97
CSPG5-205ENST00000610462 PALLDQ8WX93 1383 aa33.63■■■□□ 2.97
CSPG5-205ENST00000610462 DDX46Q7L014 1031 aaKnown RBP33.62■■■□□ 2.97
CSPG5-205ENST00000610462 TICAM2Q86XR7 235 aa33.62■■■□□ 2.97
CSPG5-205ENST00000610462 SPEF2Q9C093 1822 aa33.62■■■□□ 2.97
CSPG5-205ENST00000610462 NLRP10Q86W26 655 aa33.62■■■□□ 2.97
CSPG5-205ENST00000610462 ZSCAN31Q96LW9 406 aaPredicted RBP33.62■■■□□ 2.97
CSPG5-205ENST00000610462 HMG20BQ9P0W2 317 aa33.62■■■□□ 2.97
CSPG5-205ENST00000610462 CEP126Q9P2H0 1117 aa33.62■■■□□ 2.97
CSPG5-205ENST00000610462 A0A1B0GUL7 405 aa33.61■■■□□ 2.97
CSPG5-205ENST00000610462 USPL1Q5W0Q7 1092 aa33.61■■■□□ 2.97
CSPG5-205ENST00000610462 CCDC9Q9Y3X0 531 aaKnown RBP33.61■■■□□ 2.97
CSPG5-205ENST00000610462 ZSCAN21Q9Y5A6 473 aaPredicted RBP33.61■■■□□ 2.97
CSPG5-205ENST00000610462 MYH3P11055 1940 aa33.61■■■□□ 2.97
CSPG5-205ENST00000610462 FOXD4L5Q5VV16 416 aaPredicted RBP33.6■■■□□ 2.97
CSPG5-205ENST00000610462 FOXD4L4Q8WXT5 416 aaPredicted RBP33.6■■■□□ 2.97
CSPG5-205ENST00000610462 LARP6Q9BRS8 491 aaKnown RBP33.6■■■□□ 2.97
CSPG5-205ENST00000610462 DDB1Q16531 1140 aa33.6■■■□□ 2.97
CSPG5-205ENST00000610462 TSGA10IPQ3SY00 556 aa33.6■■■□□ 2.97
CSPG5-205ENST00000610462 PAG1Q9NWQ8 432 aa33.6■■■□□ 2.97
CSPG5-205ENST00000610462 MCMDC2Q4G0Z9 681 aa33.59■■■□□ 2.97
CSPG5-205ENST00000610462 SH2B1Q9NRF2 756 aaPredicted RBP33.59■■■□□ 2.97
CSPG5-205ENST00000610462 WDR33Q9C0J8 1336 aaKnown RBP33.59■■■□□ 2.97
CSPG5-205ENST00000610462 XRCC6P12956 609 aaKnown RBP eCLIP33.59■■■□□ 2.97
CSPG5-205ENST00000610462 IL6STP40189 918 aaPredicted RBP33.59■■■□□ 2.97
CSPG5-205ENST00000610462 GPTP24298 496 aa33.58■■■□□ 2.97
CSPG5-205ENST00000610462 SH3TC1Q8TE82 1336 aa33.58■■■□□ 2.97
CSPG5-205ENST00000610462 NWD2Q9ULI1 1742 aa33.58■■■□□ 2.97
CSPG5-205ENST00000610462 ERVV-1B6SEH8 477 aa33.57■■■□□ 2.97
CSPG5-205ENST00000610462 PRPF40AO75400 957 aaKnown RBP33.57■■■□□ 2.97
CSPG5-205ENST00000610462 MRE11P49959 708 aa33.57■■■□□ 2.97
CSPG5-205ENST00000610462 IFIT5Q13325 482 aaKnown RBP33.57■■■□□ 2.97
CSPG5-205ENST00000610462 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.57■■■□□ 2.97
CSPG5-205ENST00000610462 AKAP2Q9Y2D5 859 aa33.57■■■□□ 2.97
CSPG5-205ENST00000610462 GOLIM4O00461 696 aa33.57■■■□□ 2.96
CSPG5-205ENST00000610462 LARGE1O95461 756 aa33.57■■■□□ 2.96
CSPG5-205ENST00000610462 IFIT1P09914 478 aaKnown RBP33.56■■■□□ 2.96
CSPG5-205ENST00000610462 TAF7LQ5H9L4 462 aa33.56■■■□□ 2.96
CSPG5-205ENST00000610462 BLOC1S2Q6QNY1 142 aa33.55■■■□□ 2.96
CSPG5-205ENST00000610462 SEC62Q99442 399 aaKnown RBP33.55■■■□□ 2.96
CSPG5-205ENST00000610462 ALDH8A1Q9H2A2 487 aaPredicted RBP33.55■■■□□ 2.96
CSPG5-205ENST00000610462 U3KPZ7 1027 aaPredicted RBP33.55■■■□□ 2.96
CSPG5-205ENST00000610462 CHGBP05060 677 aa33.54■■■□□ 2.96
CSPG5-205ENST00000610462 DZIP3Q86Y13 1208 aaKnown RBP33.54■■■□□ 2.96
CSPG5-205ENST00000610462 SYNE4Q8N205 404 aa33.54■■■□□ 2.96
CSPG5-205ENST00000610462 CCDC85AQ96PX6 553 aaPredicted RBP33.54■■■□□ 2.96
CSPG5-205ENST00000610462 SMC3Q9UQE7 1217 aa33.54■■■□□ 2.96
CSPG5-205ENST00000610462 CCDC129Q6ZRS4 1044 aa33.54■■■□□ 2.96
CSPG5-205ENST00000610462 HELLSQ9NRZ9 838 aa33.54■■■□□ 2.96
CSPG5-205ENST00000610462 SPATA31A5Q5VU36 1347 aa33.54■■■□□ 2.96
CSPG5-205ENST00000610462 SPATA31A7Q8IWB4 1347 aa33.54■■■□□ 2.96
CSPG5-205ENST00000610462 CHAMP1Q96JM3 812 aa33.53■■■□□ 2.96
CSPG5-205ENST00000610462 RPS6KB1P23443 525 aa33.52■■■□□ 2.96
CSPG5-205ENST00000610462 KRT32Q14532 448 aa33.52■■■□□ 2.96
CSPG5-205ENST00000610462 TTLL11Q8NHH1 800 aa33.52■■■□□ 2.96
CSPG5-205ENST00000610462 GRPEL1Q9HAV7 217 aa33.52■■■□□ 2.96
CSPG5-205ENST00000610462 TAF6LQ9Y6J9 622 aa33.52■■■□□ 2.96
CSPG5-205ENST00000610462 CCDC83Q8IWF9 413 aa33.52■■■□□ 2.96
CSPG5-205ENST00000610462 ANKRD1Q15327 319 aa33.51■■■□□ 2.96
CSPG5-205ENST00000610462 CTSWP56202 376 aa33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms